DN621028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.791e-18 Identity = 53/168 (31.55%), Postives = 93/168 (55.36%), Query Frame = -2 Query: 124 DPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 624 +P+ K++I+PRG A G + P+E L ++ L + + LGGR AE+V+ G+ ++TGA ND +V+++ V +GFS K+GL++ P K YS T ++D EVR+ V AY R +++ H + ++A+LL+EKE + ++ + + Sbjct: 601 EPLLKVTIVPRGTAALGFAQYVPNENLL----MTKEQLFDMTCMTLGGRAAEQVLIGK--ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSF------PPRDDGYDFSKPYSNKTGAIIDEEVRDWVAKAYERTVELVEEHKVKVAEIAELLLEKEVLHQDDLLKI 756
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: YME1_SCHPO (Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.877e-18 Identity = 53/171 (30.99%), Postives = 96/171 (56.14%), Query Frame = -2 Query: 100 KISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 612 K +I+PRG + G+T P ++ ++R + V +GGR AEE+++G++ +T+GA ND + ++VAR+MV FG S +IG V++ + + S AT +V++E++ L+E +Y R+ ++ +H L LA L++ E + EE M+ + G +L Sbjct: 549 KATIMPRGSSLGMTISLPD---MDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKITSGAHNDIDKATQVARRMVTEFGMSDRIGPVSL------------EAEMDNLSPATRALVESEIKSLLEASYERSLSLLKSHKKELDALATALVDYEFLTAEE-MNRVVKGDRDL 703
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17 Identity = 57/172 (33.14%), Postives = 91/172 (52.91%), Query Frame = -2 Query: 106 VAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKA 618 V K+SIIPRG A G T P E + L + L ++ V LGGR AEEV E ++TGASND + + + + MV +G S GL+ + N FLG S +++S TA+ +D ++ L+E Y KQ ++ + + + + + L +KE + GE + + +A Sbjct: 451 VNKVSIIPRGMAALGYTLNTPEENKY---LMQKHELIAEIDVLLGGRAAEEVFL--EEISTGASNDLERATDIIKGMVSYYGMSSVSGLMVL-EKQRNAFLGGGYGSSREFSEKTAEEMDLFIKNLLEERYQHVKQTLSDYREAIEIMVKELFDKEVITGERVREIISEYEA 616
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.874e-17 Identity = 57/165 (34.55%), Postives = 90/165 (54.55%), Query Frame = -2 Query: 133 DPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEF 624 D V KI+IIPRG + G TF P ++R + + L ++ V L GR AE V FGE V+TGA ND + + + R+M+ +G S+K VA+ G Q++ ++YS T VD EV ++ Y ++T ++L +A L+E+ET++ +EF Sbjct: 417 DKVHKITIIPRGTSALGYTFHIPEDDR---HIVTEQQLLAEVDVLLSGRAAEFVAFGE--VSTGAGNDISRATDIVRKMITDYGMSEKFQNVALTRRGTGYLAEPQLA--REYSECTQQYVDEEVARVLAERYRAVVALLTEKKELLEYIATRLLERETIERDEF 574
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17 Identity = 55/161 (34.16%), Postives = 87/161 (54.04%), Query Frame = -2 Query: 139 VAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGE 618 V K+SIIPRG A G T P E + L + L ++ V LGGR AE+V E ++TGASND + + + + MV +G S GL+ + N FLG S +++S TA+ +D ++ L+E Y KQ ++ + + + + + L +KE + GE Sbjct: 451 VNKVSIIPRGMAALGYTLNTPEENKY---LMQKHELIAEIDVLLGGRAAEDVFL--EEISTGASNDLERATDIIKGMVSYYGMSSVSGLMVL-EKQRNAFLGGGYGSSREFSEKTAEEMDLFIKNLLEERYKHVKQTLSDYREAIEIMVKELFDKEVITGE 605
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17 Identity = 56/161 (34.78%), Postives = 86/161 (53.42%), Query Frame = -2 Query: 139 VAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGE 618 V K+SIIPRG A G T P E + L + L ++ V LGGR AE+V E ++TGASND + + + + MV +G S GL+ + N FLG S +++S A+ +D+ ++ L+E Y KQ ++ + D + + L EKE + GE Sbjct: 457 VNKVSIIPRGMAALGYTLNTPEENKY---LMQKHELIAEIDVLLGGRAAEDVFLQE--ISTGASNDLERATDIIKGMVSYYGMSDVSGLMVL-EKQRNSFLGGGFGSGREFSEKMAEEMDSFIKNLLEERYVHVKQTLSDYKDAIEVMVNELFEKEVITGE 611
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.060e-15 Identity = 55/168 (32.74%), Postives = 91/168 (54.17%), Query Frame = -2 Query: 124 DPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 624 + V K+SI PR A G + P ++ L +++ L +M +ALGGR AE + F VT+GA +D +V+R+A MV++FG + IG V+ P G ++ +S ++D E R LV AY ++++ ++D L LA L+EKE ++ E+ +L Sbjct: 552 EAVMKVSIAPRTNAALGFSQMLPRDQYL----FTKEQLFERMCMALGGRAAEAISFSR--VTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSF--PEAQE--GLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANALLEKEVINYEDIEAL 709
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.060e-15 Identity = 54/168 (32.14%), Postives = 91/168 (54.17%), Query Frame = -2 Query: 124 DPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 624 + V K+SI PR A G P ++ L +++ L +M +ALGGR +E + F E VT+GA +D +V+R+A MV++FG + IG ++ P G ++ +S ++D E R LV AY ++++ ++D L LA L+EKE ++ E+ +L Sbjct: 589 EAVMKVSITPRTNAALGFAQMLPRDQHL----FTKEQLFERMCMALGGRASEALSFNE--VTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISF--PEAQE--GLMGIGRRPFSQGLQQMMDHEARLLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEAL 746
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.690e-15 Identity = 54/168 (32.14%), Postives = 91/168 (54.17%), Query Frame = -2 Query: 124 DPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 624 + V K+SI PR A G + P ++ L +++ L +M +ALGGR AE + F VT+GA +D +V+R+A MV++FG + IG V+ P G ++ +S ++D E + LV AY ++++ ++D L LA L+EKE ++ E+ +L Sbjct: 589 EAVMKVSIAPRTNAALGFSQMLPRDQYL----FTKEQLFERMCMALGGRAAEAISFSR--VTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSF--PEAQE--GLMGIGRRPFSQGLQQMMDHEAKLLVAKAYRHTEKVLLDNLDKLQALANALLEKEVINYEDIEAL 746
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH7_ARATH (Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.884e-14 Identity = 58/188 (30.85%), Postives = 94/188 (50.00%), Query Frame = -2 Query: 94 VAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEF------------MSLFIDGKAELFV 618 V K+SI+PR G A G T+ P+ E + L L ++ LGGR AEEV++ ++TGA +D + + +A + V +G ++KIG V++ G S D+V EV L+++A A ++ + D+L L L EKE V+GEE +++F++GK EL + Sbjct: 611 VEKLSILPRTGGALGFTYIPPTSE--DRYLLFIDELLGRLVTLLGGRAAEEVVYSGR-ISTGAFDDIRRATDMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGSPWGRDQGKLVDLVQKEVTILLQSALDVALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWLSMVVAPEELAVFVEGKQELLL 795 The following BLAST results are available for this feature:
BLAST of DN621028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621028 ID=DN621028; Name=DN621028; organism=Citrus sinensis; type=EST; length=628bpback to top |