DN620945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 6.153e-50 Identity = 90/125 (72.00%), Postives = 105/125 (84.00%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 376 FD+++P F IAQ RAGVVPV Y+RV C ++GGIRFTI GHSYFNLVL+TNVGGAGDV AVS+KGSR+GWQ MS NWG NWQ+ L+GQ LSF+VT SDGRTVTS NVAP+ WSFG+T+SG QF Sbjct: 124 FDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFSGGQF 248
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 2.338e-49 Identity = 88/126 (69.84%), Postives = 107/126 (84.92%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 376 FD+SQPVFQ IA ++AG+VPV+Y+RV C ++GGIRFTINGHSYFNLVL+TNVGGAGDVHAV++K R+ WQ +SRNWGQNWQS L+GQ+LSF+VTT DGR+V S N P WSFG+T+SGAQF Sbjct: 165 FDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQTFSGAQF 290
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.054e-49 Identity = 88/126 (69.84%), Postives = 104/126 (82.54%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 379 FDL+ PVF IAQYRAG+VPV+Y+RVPC +RGGIRFTINGH YFNLVLITNV GAGD+ S+KGSRTGW +SRNWGQNWQSN L GQ+LSF+VT SD RT TS+N+ P++W FG+T+ G FR Sbjct: 131 FDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFR 256
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 3.988e-49 Identity = 86/126 (68.25%), Postives = 104/126 (82.54%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 379 FDL+ P+F HIA+YRAG+VPV+Y+RVPC ++GG+RFTING YFNLVLITNV GAGD+ S+KG+ TGW PMSRNWGQNWQSN+ L GQ+LSF+VT SD RT TS+N APA W FG+T+ G FR Sbjct: 138 FDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFR 263
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 5.759e-48 Identity = 84/126 (66.67%), Postives = 104/126 (82.54%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 379 FDL+ PVF IA+YRAG+VP++Y+RV C + GGIRFTINGH YFNLVLITNV GAGD+ S+KGS+TGW ++RNWGQNWQSN L GQSLSF+VT+SD RT TS+N+AP++W FG+T+ G FR Sbjct: 134 FDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFR 259
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 9.824e-48 Identity = 85/126 (67.46%), Postives = 104/126 (82.54%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 379 FDL+ P+F IA+Y+AG+VPV+Y+R+PC ++GGIRFTING YFNLVL+TNV GAGDV VS+KGS T W +SRNWGQNWQSN L GQSLSF+V TSDGR+ TS N+AP++W FG+TYSG FR Sbjct: 132 FDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFR 257
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.283e-47 Identity = 85/128 (66.41%), Postives = 107/128 (83.59%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK---GSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 376 FDLSQP F IA++++G+VPV+Y+RV C R+GG+RFTINGHSYFNLVL++NVGGAGDVHAV++K G + WQ M+RNWGQNWQS L+GQ+LSF VTT D R+V SYNVAPA W+FG+T++G QF Sbjct: 136 FDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFTGRQF 263
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 2.858e-47 Identity = 85/126 (67.46%), Postives = 103/126 (81.75%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 379 FDL+ P+F I YRAG+VPV+Y+RVPC + GGIRFT+NG YFNLVL+TNV GAGD++ VS+KGS+T W MSRNWGQNWQSN L GQSLSF+VT SD R+ TS+NVAPA+W FG+T+SG FR Sbjct: 136 FDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNFR 261
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 4.876e-47 Identity = 81/131 (61.83%), Postives = 108/131 (82.44%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG------WQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 376 FDL++P F IA++ AG+VPV+++RV C R+GG+RFT+NGH+YFNLVL+TNVGGAGDV ++++KGS +G WQPMSRNWGQNWQSN YL+G++LSF+VT DGR++T +VAPA W FG+T+ G QF Sbjct: 129 FDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTFEGRQF 259
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 3.160e-46 Identity = 81/126 (64.29%), Postives = 104/126 (82.54%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 379 FDL+ P+F IA+YRAG+VPV+++RVPC +RGGIRFTING YFNLVL+TNV GAG++ + +KG+ T W MSRNWGQNWQSN+ L GQSLSF+VT+SD R+ TS+N+APA+W FG+T+ G FR Sbjct: 131 FDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNFR 256 The following BLAST results are available for this feature:
BLAST of DN620945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DN620945 ID=DN620945; Name=DN620945; organism=Citrus sinensis; type=EST; length=570bpback to top |