DN620945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.591e-35 Identity = 64/121 (52.89%), Postives = 90/121 (74.38%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 364 FD+SQP +++I Y AG+VP+ Y++V C R GG+RF ING +YF LVL+TN+ G+G + ++S+KGS TGW M+RNWG NWQ L GQ+LSF VT++ G+T+ + PA WSFG+T+S Sbjct: 113 FDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 233
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 4.733e-34 Identity = 68/122 (55.74%), Postives = 86/122 (70.49%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSG 367 FDLS P+F IAQ +A +VPV Y+RVPC + GG++F + G+ +L NVGGAGD+ AVS KGS+T W MSR WGQNW +N L GQS+S +VTTSDG T +V PASW FG+T+ G Sbjct: 137 FDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDG 258
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.377e-33 Identity = 61/121 (50.41%), Postives = 90/121 (74.38%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 364 FD+++P + I Y+AG+VPV Y+RVPC ++GG+RFT+ G +YF LVLI+NV G+G + +V +KG T P+SRNWG NWQS+ L GQ+L+F VT++ G+T+ N+ PA W FG+++S Sbjct: 133 FDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWWKFGQSFS 253
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.007e-33 Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQY-RAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS--GAQF 376 FD+S P F IA+ G+VPV Y+RV C RRGG+RFT+ G FN+V+I+NVGG G V +V+++GS+ W M+RNWG NWQS+ L GQ LSFKVT +D +T T NV P+SW FG+T+S G QF Sbjct: 123 FDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSSRGRQF 251
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.233e-33 Identity = 64/121 (52.89%), Postives = 90/121 (74.38%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGR-TVTSYNVAPASWSFGRTY 361 FDL++P F IA ++AG++PV+Y+RV C + GGIRF G+ Y+ LV + NVGG GD+ +++KGSRTGW MS NWG ++Q+ + L GQSLSF++T+ R T+ +YN APASWS G+TY Sbjct: 130 FDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAGKTY 250
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.872e-31 Identity = 59/121 (48.76%), Postives = 87/121 (71.90%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGS-RTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY 361 FDL+ P F IA+ + GVVPV+Y++V C R+GGI++TI G+ +N+V++ NVGGAGDV +++KG+ R W P+ R+WGQ W++ L G+SL+F+V T D R TS+ VAP W++ TY Sbjct: 164 FDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDWTYDNTY 284
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 3.750e-31 Identity = 63/123 (51.22%), Postives = 85/123 (69.11%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSF-GRTYSG 367 FDLSQP+F IA+Y+AGVVPV ++RVPC + GG++F I G+ +F ++L NVGGAG V A+ IKG+RT W M +NWGQ W + L GQ LSF++TTSDG +V P W G+++ G Sbjct: 186 FDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDWKCNGQSFDG 308
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.147e-30 Identity = 63/122 (51.64%), Postives = 84/122 (68.85%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK-GSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTT-SDGRTVTSYNVAPASWSFGRTY 361 FDLS+P F +A +RAG+VPV Y+RVPC R GG+RF + G+ Y+ L + NV GAGDV + +K G GW MS NWG ++Q+ L GQ+LSFKVT+ + G+T+ + V PASW FG TY Sbjct: 138 FDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASWCFGLTY 259
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 3.293e-19 Identity = 52/128 (40.62%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG--WQPMSRNWGQNWQSNTYL-NGQSLSFKVTT--SDGRTVTSYNVAPASWSFGRTYSGA 370 FD++ P F +AQ AG+VPV Y+RVPC R GG+RF + G+ Y+ L+ + NVGGAGDV ++S+K S G W + NWG +Q L N L+ K+TT + +T+ + W G Y G+ Sbjct: 153 FDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYSTPQQTIIVSDAISPWWITGLCYQGS 280
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.857e-13 Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 47 AGVVPVAYKRVPCGRRG-GIRFTIN--GHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSL----SFKVTTSDGRTVTSYNVAPASWSFGRTY 361 AG++ V Y+RVPC G I F ++ + ++ VLI G GD++AV + + GW PM +NWG W+ N+ G++L S ++T+ G+ + + NV PASW G TY Sbjct: 175 AGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIPASWKPGVTY 285 The following BLAST results are available for this feature:
BLAST of DN620945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DN620945 ID=DN620945; Name=DN620945; organism=Citrus sinensis; type=EST; length=570bpback to top |