DN620933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8_XENLA (40S ribosomal protein S8 OS=Xenopus laevis GN=rps8 PE=2 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 7.303e-35 Identity = 81/176 (46.02%), Postives = 103/176 (58.52%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXDAPATEE---AKKSSHVLRKLEKRQKDRTLDPHIE 569 MGISRD+ H YE GR ANTK+ + + +RVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ I+ VD+ PF+QW+ HY + +GR P EE K+S +K E+R+K + P +E Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYEPGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDAGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCILLVDSTPFRQWFEAHYALPLGRKKGAKL------------TPEEEEILNKKRSKKTQKKYEERKKTAKISPLLE 163
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8A_SCHPO (40S ribosomal protein S8-A OS=Schizosaccharomyces pombe GN=rps8a PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.303e-35 Identity = 82/173 (47.40%), Postives = 103/173 (59.54%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIE 569 MGI+RDS H +ELGRQP+NT++ K + +RVRGGN K+RALRLD+GN+SWGSE V++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPF+ WY HYG+ +G A +T KS HV RK R D +D +E Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG--------------SKGKKATSTPN-PKSKHVQRKHSARLGDSKVDSALE 157
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8_DROME (40S ribosomal protein S8 OS=Drosophila melanogaster GN=RpS8 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 9.537e-35 Identity = 82/173 (47.40%), Postives = 103/173 (59.54%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIE 569 MGISRDS H +ELGR ANTKL S + V ++R RGGN K RALRL+TGN++W SE V RKTRI DVVYNASNNELVRT+TLVK++IV +DA PF+QWY HY + +GR D K+S V++K +RQK ++ +E Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGR-VHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGR-------KRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALE 165
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8_YEAST (40S ribosomal protein S8 OS=Saccharomyces cerevisiae GN=RPS8A PE=1 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 1.377e-33 Identity = 68/124 (54.84%), Postives = 87/124 (70.16%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR 422 MGISRDS H +ELGRQPANTK+ + K + +R RGGN K+RALR++TGN+SW SE +++KTRI VVY+ SNNELVRT TL K+AIVQ+DA PF+QW+ HYG +G+ Sbjct: 1 MGISRDSRHKRSATGAKRAQFRKKRKFELGRQPANTKIGA-KRIHSVRTRGGNKKYRALRIETGNFSWASEGISKKTRIAGVVYHPSNNELVRTNTLTKAAIVQIDATPFRQWFEAHYGQTLGK 123
BLAST of DN620933 vs. ExPASy Swiss-Prot
Match: RS8_LEIMA (40S ribosomal protein S8 OS=Leishmania major GN=RPS8 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.557e-32 Identity = 67/122 (54.92%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 51 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI 416 MGI R +H ELGR PANT+L + + V +R RGGN K RALRLDTGN++W SEA+ + R+LDVVYNA++NELVRT+TLVK+ IV VDAAPFK+WY +HYG+D+ Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARR-VSPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDL 121 The following BLAST results are available for this feature:
BLAST of DN620933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN620933 ID=DN620933; Name=DN620933; organism=Citrus sinensis; type=EST; length=571bpback to top |