FC922050
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: GBLP_SOYBN (Guanine nucleotide-binding protein subunit beta-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11 Identity = 47/166 (28.31%), Postives = 75/166 (45.18%), Query Frame = 1 Query: 4 VVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGE 501 VVL + +SG +G +R+WDL A + + V V S+ D +V+A+ T +W + G T + AH+ ++ SP +P + +AS D TVK+WN+ L TL GH +V S DG+ + D LW ++ G+ Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKD-VLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYT----IQDGDAHSDWVSCVRFSPSTLQPT--IVSASWDRTVKVWNLTNCKLRNTLAGHNGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: WDR69_DANRE (WD repeat-containing protein 69 OS=Danio rerio GN=wdr69 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 42/137 (30.66%), Postives = 67/137 (48.91%), Query Frame = 1 Query: 145 WDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALH 555 WD SL+ A+ +C VW G + L L HN +L F + +ATAS+D T ++++ D F L GH+ + F+ G+ ++TAS D T+R+W + TG ++V +GH CA + Sbjct: 271 WDCSLIATASLDKSCKVWDAEGG-------QCLATLLGHNDEVLDVC----FNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFN 396
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: UTP13_SCHPO (Probable U3 small nucleolar RNA-associated protein 13 OS=Schizosaccharomyces pombe GN=utp13 PE=2 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 42/157 (26.75%), Postives = 72/157 (45.86%), Query Frame = 1 Query: 55 NIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGH 525 N VW + A+ D V ++ V DG ++ +A+ T +W G E + L+ H + C +P R LA+ S D T++IWNVD +TL GH + ++ G +++A++D ++WS+S+GE + H Sbjct: 455 NRAVWTIKAH----------DRDVNAIQVSKDGRIIASASQDKTIKLWDSSTG-------EVVGVLRGHRRGVWACSFNPF----SRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNH 590
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: TUP1_KLULA (General transcriptional corepressor TUP1 OS=Kluyveromyces lactis GN=TUP1 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 46/190 (24.21%), Postives = 84/190 (44.21%), Query Frame = 1 Query: 16 PNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVM-WDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEK-------TLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALHDG 561 P+ +L+SG + +R+WDLT +CS L ++ V ++ V +G + A + T VW + T E L + S F + + + S D +VK+WN++G + +K T GH+ +V + + Y+++ S D W +G + + QGH + I + +G Sbjct: 458 PSGNKLVSGSGDRTVRIWDLTTGTCSLTL--SIEDGVTTVAVSPGEGKFIAAGSLDRTVRVW----DSDTGFLVERLDSENELGTGHRDSVYSVVFTRDGKGVVSGSLDRSVKLWNLNGLSGQKSHAECEVTYTGHKDFVLSVATTQNDEYILSGSKDRGVLFWDTKSGNPLLMLQGHRNSVISVTVANG 641
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: TG125_CAEBR (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae GN=tag-125 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 31/90 (34.44%), Postives = 52/90 (57.78%), Query Frame = 1 Query: 277 KCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICC 546 K + + +F ++L T+S+D TVKIWN+ + E+TL GH+ V D +S D ++TAS D T +++ + T + + +GH CC Sbjct: 80 KSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCC 169
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LIS1_RAT (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 43/180 (23.89%), Postives = 77/180 (42.78%), Query Frame = 1 Query: 4 VVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATIC 543 V+ HP + ++S ++ I+VWD L D +V+ ++ G L+ + + T +W FE + + H+ + + P ++ +AS D T+K+W V KT GH+ WV + DG + + S+D T R+W ++T E + H C Sbjct: 114 VIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSADMTIKLW-------DFQGFECIRTMHGHDHNVSSVAIMPN----GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LIS1_PANTR (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan troglodytes GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 43/180 (23.89%), Postives = 77/180 (42.78%), Query Frame = 1 Query: 4 VVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATIC 543 V+ HP + ++S ++ I+VWD L D +V+ ++ G L+ + + T +W FE + + H+ + + P ++ +AS D T+K+W V KT GH+ WV + DG + + S+D T R+W ++T E + H C Sbjct: 114 VIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSADMTIKLW-------DFQGFECIRTMHGHDHNVSSVAIMPN----GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LIS1_MOUSE (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus GN=Pafah1b1 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 43/180 (23.89%), Postives = 77/180 (42.78%), Query Frame = 1 Query: 4 VVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATIC 543 V+ HP + ++S ++ I+VWD L D +V+ ++ G L+ + + T +W FE + + H+ + + P ++ +AS D T+K+W V KT GH+ WV + DG + + S+D T R+W ++T E + H C Sbjct: 114 VIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSADMTIKLW-------DFQGFECIRTMHGHDHNVSSVAIMPN----GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LIS1_HUMAN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo sapiens GN=PAFAH1B1 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 43/180 (23.89%), Postives = 77/180 (42.78%), Query Frame = 1 Query: 4 VVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATIC 543 V+ HP + ++S ++ I+VWD L D +V+ ++ G L+ + + T +W FE + + H+ + + P ++ +AS D T+K+W V KT GH+ WV + DG + + S+D T R+W ++T E + H C Sbjct: 114 VIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSADMTIKLW-------DFQGFECIRTMHGHDHNVSSVAIMPN----GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LIS1_CAEEL (Lissencephaly-1 homolog OS=Caenorhabditis elegans GN=lis-1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 46/190 (24.21%), Postives = 79/190 (41.58%), Query Frame = 1 Query: 1 TVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQA-----HNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALH 555 +V P ++S ++ I+ WD++ C D VR + + DG+L +A+ T VW + + + H ++ Y PE H L + S D ++K WN++ + TL+ H+ WV F G YLI+ + D T R+W +S ++ + H A H Sbjct: 196 SVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDW-VRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTH-ILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFH 383 The following BLAST results are available for this feature:
BLAST of FC922050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >FC922050 ID=FC922050; Name=FC922050; organism=Citrus sinensis; type=EST; length=765bpback to top |