FC922046

Overview
NameFC922046
Unique NameFC922046
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC922046_ssr321 microsatellite FC922046_ssr321:321..330. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:1..366. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_RHIL3 (Enolase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=eno PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.713e-23
Identity = 57/90 (63.33%), Postives = 63/90 (70.00%), Query Frame = -3
Query:    2 ITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 271
            IT + AR+I DSRGNPTVEVDV   DG + RAAVPSGASTG +EA+ELRDGG  YLGKGV KAV   N  I  A+ G D   Q  IDN M
Sbjct:    4 ITDIIAREILDSRGNPTVEVDVYLEDGSMGRAAVPSGASTGAHEAVELRDGGKRYLGKGVEKAVEAANTEIFDAIGGIDAENQIQIDNIM 93          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_RHIEC (Enolase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=eno PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.713e-23
Identity = 57/90 (63.33%), Postives = 63/90 (70.00%), Query Frame = -3
Query:    2 ITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 271
            IT + AR+I DSRGNPTVEVDV   DG + RAAVPSGASTG +EA+ELRDGG  YLGKGV KAV   N  I  A+ G D   Q  IDN M
Sbjct:    4 ITDIIAREILDSRGNPTVEVDVYLEDGSMGRAAVPSGASTGAHEAVELRDGGKRYLGKGVEKAVEAANTEIFDAIGGIDAENQIQIDNIM 93          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_CARHZ (Enolase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=eno PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.713e-23
Identity = 57/91 (62.64%), Postives = 66/91 (72.53%), Query Frame = -3
Query:    2 ITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 271
            I  V AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA+ELRD     YLGKGV++AV NVN+IIGP + G D  +Q  ID Y+
Sbjct:    4 IREVIAREILDSRGNPTVEVDVILEDGTWGRAAVPSGASTGAFEAVELRDNDPQRYLGKGVTQAVENVNSIIGPEILGFDALDQVGIDEYL 94          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_BACSU (Enolase OS=Bacillus subtilis GN=eno PE=1 SV=4)

HSP 1 Score: 107.842 bits (268), Expect = 1.713e-23
Identity = 59/91 (64.84%), Postives = 65/91 (71.43%), Query Frame = -3
Query:    2 ITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 271
            I  V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG YEA+ELRDG  D YLGKGV  AV+NVN II P L G D TEQ AID  +
Sbjct:    4 IVDVYAREVLDSRGNPTVEVEVYTETGAFGRALVPSGASTGEYEAVELRDGDKDRYLGKGVLTAVNNVNEIIAPELLGFDVTEQNAIDQLL 94          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_BACA2 (Enolase OS=Bacillus amyloliquefaciens (strain FZB42) GN=eno PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.713e-23
Identity = 59/91 (64.84%), Postives = 65/91 (71.43%), Query Frame = -3
Query:    2 ITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 271
            I  V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG YEA+ELRDG  D YLGKGV  AV+NVN II P L G D TEQ AID  +
Sbjct:    4 IVDVYAREVLDSRGNPTVEVEVYTETGAFGRALVPSGASTGEYEAVELRDGDKDRYLGKGVLTAVNNVNEIISPELLGFDVTEQNAIDQLL 94          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ERR1_YEAST (Enolase-related protein 1/2 OS=Saccharomyces cerevisiae GN=ERR1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.237e-23
Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = -3
Query:    2 ITITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYM 277
            ++IT V AR ++DSRGNPTVEV++TT +G + RA VPSGASTGI+EA+ELRDG  S+++GKGV+KAVSNVN+IIGPAL   +   T Q  ID  M
Sbjct:    1 MSITKVHARTVYDSRGNPTVEVEITTENG-LFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSELCVTNQKGIDELM 94          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_GEOSW (Enolase OS=Geobacillus sp. (strain WCH70) GN=eno PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.237e-23
Identity = 58/88 (65.91%), Postives = 65/88 (73.86%), Query Frame = -3
Query:   11 ITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAID 271
            I  V AR++ DSRGNPTVEV+V T DG   RA VPSGASTG YEA+ELRDG  S YLGKGV KAV NVN II PA+ G + T+Q  ID
Sbjct:    4 IVDVYAREVLDSRGNPTVEVEVYTEDGGFGRALVPSGASTGEYEAVELRDGDKSRYLGKGVLKAVENVNEIIAPAIIGFEVTDQVGID 91          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_DEIRA (Enolase OS=Deinococcus radiodurans GN=eno PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.237e-23
Identity = 54/89 (60.67%), Postives = 63/89 (70.79%), Query Frame = -3
Query:   11 ITITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAID 277
            + I  V AR++ DSRGNPTVE +V    G   RA VPSGASTG +EALELRDGG  Y+GKGV +AV NV   +GPAL G D +EQ AID
Sbjct:    1 MNIEKVIAREVLDSRGNPTVEAEVHLDSGFSGRAIVPSGASTGSHEALELRDGGERYMGKGVERAVQNVREALGPALIGMDASEQAAID 89          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_THEGJ (Enolase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eno PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.922e-23
Identity = 59/90 (65.56%), Postives = 66/90 (73.33%), Query Frame = -3
Query:    2 ITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 271
            ITAV AR+I DSRGNPTVEV+V TP   + RAAVPSGASTG +EALELRDGG  + GKGV +AV NVN II P + G D T Q  ID  M
Sbjct:    7 ITAVVAREILDSRGNPTVEVEVYTPVS-MGRAAVPSGASTGTHEALELRDGGKRFHGKGVRRAVENVNKIIAPEIIGMDVTWQRDIDMLM 95          
BLAST of FC922046 vs. ExPASy Swiss-Prot
Match: ENO_PYRHO (Enolase OS=Pyrococcus horikoshii GN=eno PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.922e-23
Identity = 58/90 (64.44%), Postives = 65/90 (72.22%), Query Frame = -3
Query:    2 ITAVKARQIFDSRGNPTVEVDVTTPDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYM 271
            ITA+ AR+I DSRGNPTVEVDV TP   + RAAVPSGASTG +EA+ELRDGG  Y GKGV +AV NVN II P L G D   Q  ID  +
Sbjct:    7 ITAIVAREILDSRGNPTVEVDVHTPIA-MGRAAVPSGASTGTHEAVELRDGGKRYHGKGVRRAVENVNKIIAPELIGMDVRWQREIDKLL 95          
The following BLAST results are available for this feature:
BLAST of FC922046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_RHIL31.713e-2363.33Enolase OS=Rhizobium leguminosarum bv. viciae (str... [more]
ENO_RHIEC1.713e-2363.33Enolase OS=Rhizobium etli (strain CFN 42 / ATCC 51... [more]
ENO_CARHZ1.713e-2362.64Enolase OS=Carboxydothermus hydrogenoformans (stra... [more]
ENO_BACSU1.713e-2364.84Enolase OS=Bacillus subtilis GN=eno PE=1 SV=4[more]
ENO_BACA21.713e-2364.84Enolase OS=Bacillus amyloliquefaciens (strain FZB4... [more]
ERR1_YEAST2.237e-2362.11Enolase-related protein 1/2 OS=Saccharomyces cerev... [more]
ENO_GEOSW2.237e-2365.91Enolase OS=Geobacillus sp. (strain WCH70) GN=eno P... [more]
ENO_DEIRA2.237e-2360.67Enolase OS=Deinococcus radiodurans GN=eno PE=3 SV=... [more]
ENO_THEGJ2.922e-2365.56Enolase OS=Thermococcus gammatolerans (strain DSM ... [more]
ENO_PYRHO2.922e-2364.44Enolase OS=Pyrococcus horikoshii GN=eno PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC06056H09T7 RindPdigS Citrus sinensis cDNA clone C06056H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922046 ID=FC922046; Name=FC922046; organism=Citrus sinensis; type=EST; length=366bp
CCATATAGTTGTCAATAGCAGTCTGCTCAGTTGGGTCCTTGCCAGCGAGT
GCAGGGCCAATGATGGCGTTGACATTGCTAACAGCTTTCGATACACCCTT
GCCTAGGTAATCAGAGCCTCCGTCTCTTAGTTCAAGCGCCTCATAAATTC
CGGTGGATGCACCGCTTGGAACAGCAGCTCTAGCCACGTGGCCATCTGGT
GTTGTCACGTCGACCTCCACCGTTGGATTTCCACGGCTGTCAAAGATCTG
CCTGGCTTTGACGGCAGTGATGGTTATTGCCATTTTCTGAAAACTGGAAA
ACCGAAGAAAGATCTAGAACGAGAGAGAGAGTCTGTGAGTGCGAGAAGAG
TCTTGTGATTCCCCGC
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