EG358250

Overview
NameEG358250
Unique NameEG358250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length298
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSB_SOLTU (Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.982e-28
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 2 
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E+RKAQR +GPATI+ IGT+TP NCVDQSTYPDYYFRITNSE  T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSA_SOLTU (Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.982e-28
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 2 
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E+RKAQR +GPATI+ IGT+TP NCVDQSTYPDYYFRITNSE  T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 3.982e-28
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 2 
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E+RKAQR +GPATI+ IGT+TP NCVDQSTYPDYYFRITNSE  T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 5.200e-28
Identity = 59/70 (84.29%), Postives = 62/70 (88.57%), Query Frame = 2 
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E R+AQR +GPATIM IGTATP NCVDQSTYPDYYFRITNSE MT+LKEKFKRMCDKSMI KRYM
Sbjct:    1 MVTVEEVRRAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYM 70
[Close]
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.200e-28
Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 2 
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E RKAQR +GPAT++ IGTATPPNC+DQSTYPDYYFRITNSE  T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATVLAIGTATPPNCLDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.200e-28
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 2 
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  + R+AQR +GPAT+M IGTATPPNCVDQSTYPDYYFRITNSE   +LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEDIRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKAELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.792e-28
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 2 
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E R+AQR +GPATI+ IGTATP NCVDQSTYPDYYFRITNSE MTDLKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.871e-28
Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 2 
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E R+AQR +GPATI+ IGTA PPNCVDQSTYPDYYFRITNSE MT+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNCVDQSTYPDYYFRITNSEHMTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.159e-27
Identity = 58/70 (82.86%), Postives = 62/70 (88.57%), Query Frame = 2 
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E R+AQR +GPATIM IGTATP NCVDQSTYPDYYFRITNSE  T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVEEIRRAQRAEGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.159e-27
Identity = 58/70 (82.86%), Postives = 62/70 (88.57%), Query Frame = 2 
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E RKAQR QGPATIM IGT+TP NCVDQSTYPDYYFRITNSE + +LKEKFKRMC+KSMIKKRYM
Sbjct:    1 MVTVEEVRKAQRAQGPATIMAIGTSTPQNCVDQSTYPDYYFRITNSEHLVELKEKFKRMCEKSMIKKRYM 70
The following BLAST results are available for this feature:
BLAST of EG358250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSB_SOLTU3.982e-2882.86Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B... [more]
CHSA_SOLTU3.982e-2882.86Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A... [more]
CHS1_SOLLC3.982e-2882.86Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHS2_SOLLC5.200e-2884.29Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]
CHS1_CASGL5.200e-2881.43Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]
CHS1_CAMSI5.200e-2881.43Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHSY_PHAVU6.792e-2882.86Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS1... [more]
CHSY_PUELO8.871e-2881.43Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHSJ_PETHY1.159e-2782.86Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHSE_IPOPU1.159e-2782.86Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank description10g2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010g2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358250 ID=EG358250; Name=EG358250; organism=Citrus sinensis; type=EST; length=298bp
CCGGGCAGGTACCCGGGGATACAAATTTATAAAACATCAGAAGAGCTAGA
TAGGTCTCCGGGAACCGATCGATTGGAAACAACAAACAATGGTGACCGAC
TATGAATTTCGGAAGGCTCAACGGGACCAAGGTCCGGCCACGATCATGGA
CATTGGAACGGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGG
ATTATTATTTTCGCATCACAAATAGTGAACAGATGACTGATCTTAAAGAG
AAATTCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
back to top