EG358250

Overview
NameEG358250
Unique NameEG358250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length298
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_PERAE (Chalcone synthase OS=Persea americana GN=CHS PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16
Identity = 43/71 (60.56%), Postives = 48/71 (67.61%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPD-YYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV     RK QR +GPATIM IGT+TPPN VDQS YPD YYF    +      +  FKRMC+KSMIKKRYM
Sbjct:    1 MVNVEAIRKVQRAEGPATIMAIGTSTPPNAVDQSEYPDYYYFGSPTASTRPSSRRSFKRMCEKSMIKKRYM 71          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16
Identity = 39/71 (54.93%), Postives = 56/71 (78.87%), Query Frame = 2
Query:   86 TMVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            T++T+   R+ +R +G A I+ IGTA P N VDQ+TYPD+YFRITNSE + + KEKF+R+C+KS I+KR++
Sbjct:    3 TILTNTWTRREKRIEGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHL 73          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.050e-16
Identity = 41/73 (56.16%), Postives = 58/73 (79.45%), Query Frame = 2
Query:   86 TMVTDYEFRKAQRDQ--GPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            T++TD   R+A+R +  G A I+ IGTATP N VDQ+TYPD+YFRITNS+ + + KEKF+R+C+KS I+KR++
Sbjct:    6 TVLTDTWGRRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHL 78          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTF (Chalcone synthase A (Fragment) OS=Ipomoea trifida GN=CHSA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.496e-16
Identity = 37/61 (60.66%), Postives = 51/61 (83.61%), Query Frame = 2
Query:  116 AQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            A+R +G A ++ IGTATP N VDQ+TYPD+YFRITNSE + + KEKF+R+C+KS I+KR++
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHL 74          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSA_IPOCO (Chalcone synthase A (Fragment) OS=Ipomoea cordatotriloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.496e-16
Identity = 37/61 (60.66%), Postives = 51/61 (83.61%), Query Frame = 2
Query:  116 AQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            A+R +G A ++ IGTATP N VDQ+TYPD+YFRITNSE + + KEKF+R+C+KS I+KR++
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHL 74          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.566e-16
Identity = 38/70 (54.29%), Postives = 55/70 (78.57%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            ++TD    +A++ +G A I  IGTATP N VDQ+TYPD+YFRITNS+ + + KEKF+R+C+KS I+KR++
Sbjct:    7 VLTDTWSPRAKKLEGDAKIWAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHL 76          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTR (Chalcone synthase A (Fragment) OS=Ipomoea triloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.266e-15
Identity = 36/61 (59.02%), Postives = 51/61 (83.61%), Query Frame = 2
Query:  116 AQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            A+R +G A ++ IGTATP N VDQ+TYPD+YFRITNSE++ + KEKF+R+C+KS I+ R++
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSERLLEHKEKFRRICNKSKIRFRHL 74          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: BBS_PHASS (Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.960e-15
Identity = 35/69 (50.72%), Postives = 52/69 (75.36%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRY 295
            M++    +KA R  G A+I+ IG A P N ++QS YPD+YFR+TNSE + DLK+KF+R+C+K+ I+KR+
Sbjct:    1 MLSLESIKKAPRADGFASILAIGRANPDNIIEQSAYPDFYFRVTNSEHLVDLKKKFQRICEKTAIRKRH 69          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: VPS_PSINU (Phloroisovalerophenone synthase OS=Psilotum nudum GN=VPS PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.244e-13
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 2
Query:  110 RKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            RK +R  GP +++ IG+A PPN   QS +PD+YF IT S  M ++K KF RMC KS IKKR M
Sbjct:   15 RKKERASGPVSVLAIGSANPPNVFHQSLFPDFYFNITQSNHMAEVKAKFTRMCAKSGIKKRRM 77          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: TBSYN_HYPAN (Trihydroxybenzophenone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.824e-12
Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 2
Query:  137 ATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRY 295
            A+++ IGT  P + + Q  YPD+YFR TNSE MT+LKEKFKR+C KS I+KR+
Sbjct:   20 ASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRH 72          
The following BLAST results are available for this feature:
BLAST of EG358250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSY_PERAE1.202e-1660.56Chalcone synthase OS=Persea americana GN=CHS PE=2 ... [more]
CHSA_IPONI1.202e-1654.93Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]
CHSB_IPOTR2.050e-1656.16Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
CHSA_IPOTF3.496e-1660.66Chalcone synthase A (Fragment) OS=Ipomoea trifida ... [more]
CHSA_IPOCO3.496e-1660.66Chalcone synthase A (Fragment) OS=Ipomoea cordatot... [more]
CHSB_IPONI4.566e-1654.29Chalcone synthase B (Fragment) OS=Ipomoea nil GN=C... [more]
CHSA_IPOTR2.266e-1559.02Chalcone synthase A (Fragment) OS=Ipomoea triloba ... [more]
BBS_PHASS2.960e-1550.72Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 ... [more]
VPS_PSINU1.244e-1353.97Phloroisovalerophenone synthase OS=Psilotum nudum ... [more]
TBSYN_HYPAN6.824e-1258.49Trihydroxybenzophenone synthase OS=Hypericum andro... [more]

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Properties
Property NameValue
Genbank description10g2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010g2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358250 ID=EG358250; Name=EG358250; organism=Citrus sinensis; type=EST; length=298bp
CCGGGCAGGTACCCGGGGATACAAATTTATAAAACATCAGAAGAGCTAGA
TAGGTCTCCGGGAACCGATCGATTGGAAACAACAAACAATGGTGACCGAC
TATGAATTTCGGAAGGCTCAACGGGACCAAGGTCCGGCCACGATCATGGA
CATTGGAACGGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGG
ATTATTATTTTCGCATCACAAATAGTGAACAGATGACTGATCTTAAAGAG
AAATTCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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