EG358250

Overview
NameEG358250
Unique NameEG358250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length298
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSE_IPONI (Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.159e-27
Identity = 58/70 (82.86%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E RKAQR QGPATIM IGT+TP NCVDQSTYPDYYFRITNSE + +LKEKFKRMC+KSMIKKRYM
Sbjct:    1 MVTVEEVRKAQRAQGPATIMAIGTSTPQNCVDQSTYPDYYFRITNSEHLVELKEKFKRMCEKSMIKKRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.513e-27
Identity = 56/70 (80.00%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E R+AQ+ +GPAT++ IGTATPPNCVDQSTYPDYYFRITNSE  T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVDEIRQAQKAEGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.581e-27
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  + R+AQR +GPAT+M IGTATP NCVDQSTYPDYYFRITNSE  TDLKEKFKRMC+KSMI+KRYM
Sbjct:    1 MVTVEDIRRAQRAEGPATVMAIGTATPENCVDQSTYPDYYFRITNSEHRTDLKEKFKRMCEKSMIRKRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSD_IPONI (Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.581e-27
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E RKAQR +GPATI+ IGTATP NCVDQSTYPDYYFRITNS+ MTDLK+KF+RMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPANCVDQSTYPDYYFRITNSDHMTDLKQKFQRMCDKSMITKRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.402e-27
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E R+AQR +GPAT++ IGTATP NCVDQSTYPDYYFRITNSE MT+LKEKFKRMCDKS IK+RYM
Sbjct:    1 MVTVEEVRRAQRAEGPATVLAIGTATPANCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSNIKRRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.281e-26
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E RKAQR +GPAT+M IGTA PPNCVDQ+TYPDYYFRITNSE   +LKEKF+RMCDKS IKKRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS3_CAMSI (Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.673e-26
Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  +  +AQR +GPAT++ IGTATPPNCVDQSTYPDYYFRITNSE   +LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVEDVWRAQRARGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCDKSMIKKRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_PINST (Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.185e-26
Identity = 57/71 (80.28%), Postives = 62/71 (87.32%), Query Frame = 2
Query:   89 MVTDYE-FRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            M+ D E FRKAQR  GPATI+ IGTATPPN VDQSTYPDYYF+ITNSE MT+LKEKF+RMCDKS IKKRYM
Sbjct:    5 MMADLEAFRKAQRADGPATILAIGTATPPNAVDQSTYPDYYFKITNSEHMTELKEKFRRMCDKSGIKKRYM 75          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.185e-26
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV   E R AQR QGPAT++ IGT+TP NCVDQSTYPDYYFRITNSE  T+LKEKFKRMC+KSMIKKRYM
Sbjct:    1 MVNVEEIRNAQRAQGPATVLAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCEKSMIKKRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSD_PETHY (Chalcone synthase D OS=Petunia hybrida GN=CHSD PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.854e-26
Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E R AQR +GPAT++ IGTATP NCVDQSTYPDYYFRIT+SE  T+LKEKFKR+CDKSMIKKRYM
Sbjct:    1 MVTVEEVRNAQRAEGPATVLAIGTATPSNCVDQSTYPDYYFRITDSEHKTELKEKFKRICDKSMIKKRYM 70          
The following BLAST results are available for this feature:
BLAST of EG358250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSE_IPONI1.159e-2782.86Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV... [more]
CHSB_PEA1.513e-2780.00Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHSY_PERFR2.581e-2780.00Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]
CHSD_IPONI2.581e-2781.43Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV... [more]
CHSY_ANTMA4.402e-2780.00Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]
CHSY_HYPAN1.281e-2678.57Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHS3_CAMSI1.673e-2678.57Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 P... [more]
CHSY_PINST2.185e-2680.28Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=... [more]
CHSY_CATRO2.185e-2678.57Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]
CHSD_PETHY2.854e-2678.57Chalcone synthase D OS=Petunia hybrida GN=CHSD PE=... [more]

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Properties
Property NameValue
Genbank description10g2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010g2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358250 ID=EG358250; Name=EG358250; organism=Citrus sinensis; type=EST; length=298bp
CCGGGCAGGTACCCGGGGATACAAATTTATAAAACATCAGAAGAGCTAGA
TAGGTCTCCGGGAACCGATCGATTGGAAACAACAAACAATGGTGACCGAC
TATGAATTTCGGAAGGCTCAACGGGACCAAGGTCCGGCCACGATCATGGA
CATTGGAACGGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGG
ATTATTATTTTCGCATCACAAATAGTGAACAGATGACTGATCTTAAAGAG
AAATTCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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