FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:521..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_RHOPT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.617e-19
Identity = 54/135 (40.00%), Postives = 79/135 (58.52%), Query Frame = -3
Query:   25 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI 429
            AK LG +T PVL+GPV+YL L K A        +LSLLPK++ +Y E++  L AAGA  +Q DEP LV+DLD  +  AF +AY ++   L  L++++ TYF  +  +   T  +L  +     DLVR  K +  +
Sbjct:  173 AKALGYDTRPVLLGPVTYLKLGKSADA---RLDVLSLLPKLVPVYIEILGRLAAAGAKWVQLDEPALVLDLDDRERLAFRDAYGQIARELPHLDIMLTTYFGGL-GDNLDTALALP-IAGLHLDLVRAPKQINAV 302          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_STRR6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=metE PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 2.112e-19
Identity = 60/143 (41.96%), Postives = 80/143 (55.94%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LG+ T PVL+GP ++L LS   +GV         +   +  Y+EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL +TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA K
Sbjct:  147 AKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSFVAAYQEVFAKLADLGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLFQTYFGDV-RDVYADLVNLP-VDAIGLDFVEGKKTLELVKGGFPADK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_STRP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.112e-19
Identity = 60/143 (41.96%), Postives = 80/143 (55.94%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LG+ T PVL+GP ++L LS   +GV         +   +  Y+EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL +TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA K
Sbjct:  147 AKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSFVAAYQEVFAKLADLGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLFQTYFGDV-RDVYADLVNLP-VDAIGLDFVEGKKTLELVKGGFPADK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_RHOPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.112e-19
Identity = 54/135 (40.00%), Postives = 79/135 (58.52%), Query Frame = -3
Query:   25 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI 429
            AK LG +T PVL+GPV+YL L K A        +LSLLPK++ +Y E++  L AAGA  +Q DEP LV+DLD  +  AF +AY ++   L  L++++ TYF  +  +   T  +L  +     DLVR  K +  +
Sbjct:  173 AKALGYDTRPVLLGPVTYLKLGKSADA---GLDVLSLLPKLVPVYIEILGRLAAAGAKWVQLDEPALVLDLDDRERLAFRDAYGQIARELPHLDIMLTTYFGGL-GDNLDTALALP-IAGLHLDLVRAPKQINAV 302          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_CHRVO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromobacterium violaceum GN=metE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.369e-18
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A+ LGV   PVL+GP+S L L K AKG  + F  L+LLP ++  Y+E++S L+AAGA   Q DEP+L +DL+   L AF+ AYA+L        +L+ TYF DV   A + L SL  V     DLVR  + +      +PA K
Sbjct:  146 ARALGVAAKPVLLGPLSLLWLGK-AKG--RPFDRLALLPGLVAAYRELLSSLRAAGAEWAQIDEPILALDLEPSWLDAFAPAYAQLSR--HAPKLLLATYFGDVSEHAAR-LKSLP-VAGLHLDLVRAPEQISAFLPDYPADK 281          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_STRSY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus suis (strain 05ZYH33) GN=metE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.788e-18
Identity = 58/143 (40.56%), Postives = 78/143 (54.55%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LG+ T PVLIGP + L L+   +G+  T    +    ++  Y +V  +L   GA  IQ DEP LV DL + +   F   Y  L +   GL VL++TYF DV  + +  LTSL  V A G D V G +T  L+ +GFPA K
Sbjct:  147 AKNLGITTRPVLIGPFTLLQLTDFEEGLTAT----NFADSLVAAYGQVFEKLAELGAEKIQLDEPSLVKDLTAEEKALFLRIYQTLLADKKGLQVLIQTYFGDV-RDIYTELTSLP-VDAIGLDFVEGKETAALVATGFPADK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_STRAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces avermitilis GN=metE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.788e-18
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = -3
Query:  127 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYF 429
            A  LG+   PVL+GPV+YLLL+KPA GVA  F  L+LL ++L +Y EV+++L+AAGA  +Q DEP LV D    +L A   AY  L  +     +LV +YF
Sbjct:  153 ALALGLTARPVLVGPVTYLLLAKPAPGVAADFDPLTLLDRLLPVYAEVLADLRAAGAEWVQLDEPALVQDRTPAELNAAERAYRVLGGLTDRPKLLVASYF 253          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_CANAL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Candida albicans GN=MET6 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.335e-18
Identity = 61/142 (42.96%), Postives = 82/142 (57.75%), Query Frame = -3
Query:   19 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNV---LVETYFADV--PAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKS 429
            AK LGV+T PV++GPVSYL L K  K  +     +SLLPKIL +YKE++ +LK AGA  +Q DEP+LV+DL       F EAY      L G +V   ++ TYF DV    +A + L     V  + FD VR  + L+ + S
Sbjct:  157 AKALGVQTRPVILGPVSYLYLGKADKD-SLDLEPISLLPKILPVYKELLQKLKEAGAEQVQIDEPVLVLDLPEAVQSKFKEAY----DALVGADVPELILTTYFGDVRPNLKAIENLP----VAGFHFDFVRVPEQLDEVAS 289          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_XYLFA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.982e-18
Identity = 57/143 (39.86%), Postives = 82/143 (57.34%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A  LG+ T PVL+GPVS+LLLSK   G  +    L LL ++L +Y +++ +L+A+GA  +Q DEP LV+DLD+   QAF +AYA L        +L+ +YF   P      L           DLVRGT+ L+ + +  PAG+
Sbjct:  149 ALALGITTRPVLLGPVSFLLLSKTVDGSNR----LDLLERLLPVYTQLLRQLQASGAEWVQIDEPTLVLDLDAQTQQAFRKAYAALNQ-GPRPKLLLTSYFG--PLGDNLELALQLPADGLHIDLVRGTEQLDAVLNTLPAGR 284          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_STRCO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces coelicolor GN=metE PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.982e-18
Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = -3
Query:  127 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYF 429
            A  LG+   PVL+GPV+YLLL+KPA G    F  L+LL ++L +Y EV+++L+AAGA  +Q DEP  V D    +L A   AY EL ++     +LV +YF
Sbjct:  153 AVALGLTARPVLVGPVTYLLLAKPAPGAPADFEPLTLLDRLLPVYAEVLTDLRAAGAEWVQLDEPAFVQDRTPAELNALERAYRELGALTDRPKLLVASYF 253          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_RHOPT1.617e-1940.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRR62.112e-1941.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP22.112e-1941.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOPA2.112e-1940.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRVO1.369e-1842.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSY1.788e-1840.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRAW1.788e-1847.525-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CANAL2.335e-1842.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFA3.982e-1839.865-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRCO3.982e-1845.545-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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