FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_SHISS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella sonnei (strain Ss046) GN=metE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 52/141 (36.88%), Postives = 75/141 (53.19%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG    PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHNVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECOUT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GP++YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHKVKPVLLGPITYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLNAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECOSE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain SE11) GN=metE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 52/141 (36.88%), Postives = 75/141 (53.19%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG    PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHNVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECOL6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O6 GN=metE PE=3 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GP++YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHKVKPVLLGPITYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECOK1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O1:K1 / APEC GN=metE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GP++YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHKVKPVLLGPITYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLNAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECOHS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O9:H4 (strain HS) GN=metE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 52/141 (36.88%), Postives = 75/141 (53.19%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG    PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHNVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECO45 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GP++YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHKVKPVLLGPITYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLNAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECO24 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=metE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 52/141 (36.88%), Postives = 75/141 (53.19%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG    PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHNVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BURCM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 48/143 (33.57%), Postives = 73/143 (51.05%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A+ LGV   PV++GPV+YL L K      +    L+LLPK+L +Y  ++  L A G   +Q DEP+LV +LD+   QA   AYA LE+    + +L+ TYF  +      TL +   V     D +     ++ +    PA +
Sbjct:  154 ARALGVAGKPVILGPVTYLWLGKEKDDSDR----LALLPKLLPVYGALLDTLTAQGVEWVQIDEPILVTELDAEWRQALRTAYAALET--RRIKLLLATYFGTLGDNL--TLAASLPVDGLHVDAINARDEVDALVRELPADR 288          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ACTP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = -3
Query:   34 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTL 429
            AK  G +  PV++GP+++L L K  KG A  F+   LL +++ IY E+++ L A G   IQ DEP L +DL    L A+ + YA+L  +     +L+ TYF  V AE    L +L  V     DLVR  + L
Sbjct:  145 AKAAGHQVKPVIVGPLTFLWLGKE-KGEA--FNRFDLLKQLVPIYFEILTSLAAEGVEWIQIDEPALALDLPQEWLAAYQDVYAQLAKV--NAKLLLATYFGSV-AEHADLLKALP-VDGLHLDLVRAPEQL 269          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_SHISS8.593e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOUT8.593e-1336.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOSE8.593e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOL68.593e-1336.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOK18.593e-1336.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOHS8.593e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO458.593e-1336.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO248.593e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCM8.593e-1333.575-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP78.593e-1337.885-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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