FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_YERPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12
Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            A  LG +  PVL+GP++YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY  L+     + +L+ TYF D       T+ +L  V     D+V G   L ++    P
Sbjct:  150 ALALGHKIKPVLLGPITYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQEWLDAYQPAYQALQ---GQVKLLLTTYF-DSIGHNIDTIRALP-VQGLHVDVVAGHDDLAVLNKNLP 281          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_YERPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis (strain Pestoides F) GN=metE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12
Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            A  LG +  PVL+GP++YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY  L+     + +L+ TYF D       T+ +L  V     D+V G   L ++    P
Sbjct:  150 ALALGHKIKPVLLGPITYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQEWLDAYQPAYQALQ---GQVKLLLTTYF-DSIGHNIDTIRALP-VQGLHVDVVAGHDDLAVLNKNLP 281          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_YERPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12
Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            A  LG +  PVL+GP++YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY  L+     + +L+ TYF D       T+ +L  V     D+V G   L ++    P
Sbjct:  150 ALALGHKIKPVLLGPITYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQEWLDAYQPAYQALQ---GQVKLLLTTYF-DSIGHNIDTIRALP-VQGLHVDVVTGHDDLAVLNKNLP 281          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_YERPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis GN=metE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12
Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            A  LG +  PVL+GP++YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY  L+     + +L+ TYF D       T+ +L  V     D+V G   L ++    P
Sbjct:  150 ALALGHKIKPVLLGPITYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQEWLDAYQPAYQALQ---GQVKLLLTTYF-DSIGHNIDTIRALP-VQGLHVDVVTGHDDLAVLNKNLP 281          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_YERPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12
Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            A  LG +  PVL+GP++YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY  L+     + +L+ TYF D       T+ +L  V     D+V G   L ++    P
Sbjct:  150 ALALGHKIKPVLLGPITYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQEWLDAYQPAYQALQ---GQVKLLLTTYF-DSIGHNIDTIRALP-VQGLHVDVVTGHDDLAVLNKNLP 281          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECOLC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=metE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12
Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = -3
Query:   46 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG 429
            A  LG    PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G
Sbjct:  150 ALALGHNVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHG 269          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECO8A (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O8 (strain IAI1) GN=metE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12
Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = -3
Query:   46 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG 429
            A  LG    PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G
Sbjct:  150 ALALGHNVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHG 269          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ACTPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12
Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = -3
Query:   34 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTL 429
            AK  G +  PV++GP+++L L K  KG A  F+   LL +++ IY E+++ L A G   IQ DEP L +DL    L A+ + YA+L  +     +L+ TYF  V   A   L     V     DLVR  + L
Sbjct:  145 AKAAGHQVKPVIVGPLTFLWLGKE-KGEA--FNRFDLLKQLVPIYFEILTALAAEGVEWIQIDEPALALDLPQEWLAAYQDVYAQLAKV--NAKLLLATYFGSVAEHA--ALLKALPVDGLHLDLVRAPEQL 269          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ACTP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12
Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = -3
Query:   34 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTL 429
            AK  G +  PV++GP+++L L K  KG A  F+   LL +++ IY E+++ L A G   IQ DEP L +DL    L A+ + YA+L  +     +L+ TYF  V AE    L +L  V     DLVR  + L
Sbjct:  145 AKAAGHQVKPVIVGPLTFLWLGKE-KGEA--FNRFDLLKQLVPIYFEILTALAAEGVEWIQIDEPALALDLPQEWLAAYQDVYAQLAKV--NAKLLLATYFGSV-AEHADLLKALP-VDGLHLDLVRAPEQL 269          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_YERP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.466e-12
Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            A  LG +  PVL+GP++YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY  L+     + +L+ TYF D       T+ +L  V     D+V G   L ++    P
Sbjct:  150 ALALGHKIKPVLLGPITYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQEWLDAYQPAYQALQ---GQVKLLLTTYF-DSIGHNIDTIRALP-VQGLHVDVVAGHDDLAVLHKNLP 281          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_YERPS1.122e-1236.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPP1.122e-1236.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPN1.122e-1236.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPE1.122e-1236.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPA1.122e-1236.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOLC1.122e-1239.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO8A1.122e-1239.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTPJ1.122e-1236.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP21.122e-1237.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERP31.466e-1236.435-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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