FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_VIBHA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi GN=metE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.466e-12
Identity = 48/139 (34.53%), Postives = 73/139 (52.52%), Query Frame = -3
Query:    4 LGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAG 420
            LG    PVL+GP+SYL L K    + + F  L+LLP++LT Y+ ++S+L   G   +Q DEP+L ++L+     AF  AY   + I S + VL+ TYF D  ++    +  L  V     DL    + L+ +    P G
Sbjct:  154 LGHNVKPVLLGPLSYLYLGKE---IEEDFDRLTLLPRLLTAYQAILSKLANQGVEWVQIDEPILSLELEEKWGDAFKLAY---QVIRSDVKVLLTTYF-DSVSDTLDKIVELP-VDGLHIDLSASPEQLDEVVEKLPQG 284          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_PSEPW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas putida (strain W619) GN=metE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.466e-12
Identity = 51/143 (35.66%), Postives = 69/143 (48.25%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LG    PV+IGP++YL L K   G    F  L LL ++L +Y E+++ L   G   +Q DEP+LV+DL      A+   Y  L+   + L  LV TYF  +  E    L +   V     DLVR  +    I    PA K
Sbjct:  155 AKALGHAAKPVVIGPLTYLWLGKAKGG---DFDKLELLDRLLPVYDEILNRLAGQGVEWVQIDEPILVLDLPQEWKNAYERVYNILQR--APLKKLVATYFGGL--EENLGLAANLPVDGLHIDLVRAPEQYPTILDRLPAYK 290          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_VIBVY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio vulnificus (strain YJ016) GN=metE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.914e-12
Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = -3
Query:   10 GVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 417
            G +  PVL+GP+SYL L K    +   F  L+LLP++LT Y+ ++++L   G   +Q DEP+L ++L+   L AF  AY   + I S + VL+ TYF D   ++   +  L  V     DL    + L+ + +  P
Sbjct:  155 GHKVKPVLLGPLSYLYLGKE---IEDGFDRLTLLPRLLTAYQAILAKLAKQGVEWVQIDEPILALELEKPWLDAFKLAY---QVIRSDVKVLLTTYF-DSVVDSLDRIVEL-SVDGLHVDLSAAPEQLDAVLAKLP 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_DICDI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Dictyostelium discoideum GN=metE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.914e-12
Identity = 43/136 (31.62%), Postives = 73/136 (53.68%), Query Frame = -3
Query:   37 AKGLGVETVPVLIGPVSYLLLSK---PAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKL--QAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKT 429
            AK + +ET PV++GP+S+LLL K    +K  +  F  L  L  +L +Y+E+  + +  G   +Q DEP+L  DL   +L   A++ A+  +      +N+L+ TYF ++  E    +TSL  V     D +R + +
Sbjct:  182 AKSIDIETRPVVLGPISFLLLGKSSDSSKPYSSKFDSLVHLNALLGVYEELFKQFEKIGVKSVQIDEPVLCFDLFETELIKNAYTTAFNVIHKAAPNINILIATYFGEI-RENIDLITSLP-VNGIHIDTIRSSSS 315          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BURTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.914e-12
Identity = 49/144 (34.03%), Postives = 73/144 (50.69%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGL-NVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A+ LG      L+GP++ L L K   G+A     L LLP+++  Y+ +++ L+ AG   +Q DEP+  +DL +    A   AY   E+++ G   +LV TYF DV   A   L     V     DLVRG   L+   + +PA K
Sbjct:  148 ARALGHRPKAALVGPLTLLWLGKARDGLADR---LELLPRLVPAYRALLARLREAGVDWVQIDEPIFALDLPAAWRDAARPAY---EALVPGAPKLLVATYFDDVSEHA--ALLKALPVAGLHVDLVRGDAQLDAFVADYPADK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BLOPB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia pennsylvanicus (strain BPEN) GN=metE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.914e-12
Identity = 48/131 (36.64%), Postives = 71/131 (54.20%), Query Frame = -3
Query:   10 PVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 402
            P+L+GP+SYL L K  KG  K F  LSLLP +L++Y+E++  L +     IQ DEP+LV++L    L A+  AY +L      + +L+ TYF D        +T LK +     DLV     + L+ +  P
Sbjct:  159 PILLGPISYLWLGK-IKG--KKFDRLSLLPNLLSVYQEILDILLSKNIDWIQIDEPILVLELPLQWLNAYLSAYEQLH---GKVKLLLTTYF-DSIYHQLDIITRLK-IDGLHVDLVSNPDNIPLLHARLP 281          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_VIBVU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio vulnificus GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = -3
Query:   10 GVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 417
            G    PVL+GP+SYL L K    +   F  L+LLP++LT Y+ ++++L   G   +Q DEP+L ++L+   L AF  AY   + I S + VL+ TYF D   ++   +  L  V     DL    + L+ + +  P
Sbjct:  155 GHNVKPVLLGPLSYLYLGKE---IEDGFDRLTLLPRLLTAYQAILAKLAKQGVEWVQIDEPILALELEKPWLDAFKLAY---QVIRSDVKVLLTTYF-DSVVDSLDRIVEL-SVDGLHVDLSAAPEQLDAVLAKLP 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_VIBHB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = -3
Query:  118 GVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADV 417
            G +  PVL+GP+SYL L K    V + F  L+LLP++LT Y+ ++S+L + G   +Q DEP+L ++L      AF  AY   + I S + VL+ TYF  V
Sbjct:  155 GHKVKPVLLGPLSYLYLGKE---VEEGFDRLTLLPRLLTAYQTILSKLASQGVEWVQIDEPILSLELQDKWADAFKLAY---QVIRSDVKVLLTTYFDSV 248          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_VIBFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio fischeri (strain MJ11) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 50/142 (35.21%), Postives = 71/142 (50.00%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKG--VAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            A+  G    PVL+GP+SYL L K      V + F  LSLLP++LT Y+ + S+L A G   +Q DEP+L ++L      +F  AY   + I S + +L+ TYF D        +T L  V     D+      L+ I S  P
Sbjct:  156 AQKQGHNVKPVLLGPLSYLWLGKEVNDEEVEQGFDRLSLLPRLLTAYQAIFSKLSALGVEWVQIDEPILALELPKAWADSFKLAY---QVIQSDVKLLLTTYF-DGVEHHLDKITKL-AVNGLHIDVSAAPDQLDAIVSALP 292          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_VIBF1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 50/142 (35.21%), Postives = 71/142 (50.00%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKG--VAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            A+  G    PVL+GP+SYL L K      V + F  LSLLP++LT Y+ + S+L A G   +Q DEP+L ++L      +F  AY   + I S + +L+ TYF D        +T L  V     D+      L+ I S  P
Sbjct:  156 AQKQGHNVKPVLLGPLSYLWLGKEVNDEEVEQGFDRLSLLPRLLTAYQAIFSKLSALGVEWVQIDEPILALELPKAWADSFKLAY---QVIQSDVKLLLTTYF-DGVEHHLDKITKL-AVNGLHIDVSAAPDQLDAIVSALP 292          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_VIBHA1.466e-1234.535-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEPW1.466e-1235.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBVY1.914e-1233.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DICDI1.914e-1231.625-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURTA1.914e-1234.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOPB1.914e-1236.645-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBVU2.500e-1233.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHB2.500e-1241.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBFM2.500e-1235.215-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBF12.500e-1235.215-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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