FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_SHIBS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = -3
Query:   46 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG 429
            A  LG    PVL+GPV++L L K  KG  + F  LSLL  IL +Y++V++EL+  G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G
Sbjct:  150 ALALGHNVKPVLLGPVTWLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELEKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHG 269          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_SHIB3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = -3
Query:   46 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG 429
            A  LG    PVL+GPV++L L K  KG  + F  LSLL  IL +Y++V++EL+  G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G
Sbjct:  150 ALALGHNVKPVLLGPVTWLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELEKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHG 269          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_PROMH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Proteus mirabilis (strain HI4320) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 50/142 (35.21%), Postives = 73/142 (51.41%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYG--FDLVRGTKTLELIKSGFP 429
            A  LG    PVL+GP++YL L K  KG    F  LSLL  IL +Y++V+S+L+  G   +Q DEP LV+DL      A+  AY   +++   + +L+ TYF  +       L  +K +   G   DL  G   L++I    P
Sbjct:  150 ALALGHNVKPVLLGPITYLWLGK-VKG--PEFDRLSLLDAILPVYQQVLSQLQQKGIEWVQIDEPALVLDLPIEWQNAYQVAY---QALTGQVKLLLTTYFDGIT----HHLDIIKNLPVNGLHIDLCAGQDALQVIHQALP 281          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_NITOC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 52/143 (36.36%), Postives = 71/143 (49.65%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A+ L     PVL+GP+S+L L K +KG   TF  LSLL  +L +Y +V+  LK  G   +Q DEP+LV+DL      AF  AY+ L  +  G   L+ TYF  +       L     V     DLV   + L  +   FP+ K
Sbjct:  149 AQALDFPIKPVLLGPLSFLWLGK-SKG--STFDKLSLLDALLPVYGQVLHRLKTQGVEWVQIDEPILVLDLPPDWKAAFERAYSSL--VNGGPKRLLATYFGALGDNT--RLACQLPVEGLHIDLVSAPEQLAKVLDEFPSYK 284          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECOLI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain K12) GN=metE PE=1 SV=6)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GPV++L L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHKVKPVLLGPVTWLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECODH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain K12 / DH10B) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GPV++L L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHKVKPVLLGPVTWLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_COXBU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 48/134 (35.82%), Postives = 69/134 (51.49%), Query Frame = -3
Query:    1 PVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 402
            PV++GP+S+L L K  KG  ++F+ L LL K+L +Y E+  +L + G   +Q DEP+LV+DL     QAF   Y +L      L  L+ TYF  +      +LT    V     D  R    L+ + S  PA K
Sbjct:  157 PVILGPLSFLWLGK-CKG--ESFNKLLLLEKLLPVYAEIFEQLSSLGVEWVQVDEPILVLDLPPEWQQAFLTTYQQLN--FFNLKCLLATYFGSLDDNL--SLTCQLPVDGLHIDYCRAPDQLDSVLSQLPAEK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_COXBR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 48/134 (35.82%), Postives = 69/134 (51.49%), Query Frame = -3
Query:    1 PVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 402
            PV++GP+S+L L K  KG  ++F+ L LL K+L +Y E+  +L + G   +Q DEP+LV+DL     QAF   Y +L      L  L+ TYF  +      +LT    V     D  R    L+ + S  PA K
Sbjct:  157 PVILGPLSFLWLGK-CKG--ESFNKLLLLEKLLPVYAEIFEQLSSLGVEWVQVDEPILVLDLPPEWQQAFLTTYQQLN--FFNLKCLLATYFGSLDDNL--SLTCQLPVDGLHIDYCRAPDQLDSVLSQLPAEK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_COXBN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 48/134 (35.82%), Postives = 69/134 (51.49%), Query Frame = -3
Query:    1 PVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 402
            PV++GP+S+L L K  KG  ++F+ L LL K+L +Y E+  +L + G   +Q DEP+LV+DL     QAF   Y +L      L  L+ TYF  +      +LT    V     D  R    L+ + S  PA K
Sbjct:  157 PVILGPLSFLWLGK-CKG--ESFNKLLLLEKLLPVYAEIFEQLSSLGVEWVQVDEPILVLDLPPEWQQAFLTTYQQLN--FFNLKCLLATYFGSLDDNL--SLTCQLPVDGLHIDYCRAPDQLDSVLSQLPAEK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_COXB2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuG_Q212) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 48/134 (35.82%), Postives = 69/134 (51.49%), Query Frame = -3
Query:    1 PVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 402
            PV++GP+S+L L K  KG  ++F+ L LL K+L +Y E+  +L + G   +Q DEP+LV+DL     QAF   Y +L      L  L+ TYF  +      +LT    V     D  R    L+ + S  PA K
Sbjct:  157 PVILGPLSFLWLGK-CKG--ESFNKLLLLEKLLPVYAEIFEQLSSLGVEWVQVDEPILVLDLPPEWQQAFLTTYQQLN--FFNLKCLLATYFGSLDDNL--SLTCQLPVDGLHIDYCRAPDQLDSVLSQLPAEK 283          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_SHIBS2.500e-1239.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIB32.500e-1239.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PROMH2.500e-1235.215-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITOC2.500e-1236.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOLI2.500e-1236.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECODH2.500e-1236.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBU2.500e-1235.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBR2.500e-1235.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBN2.500e-1235.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB22.500e-1235.825-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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