FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_COXB1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuK_Q154) GN=metE PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.500e-12
Identity = 48/134 (35.82%), Postives = 69/134 (51.49%), Query Frame = -3
Query:    1 PVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 402
            PV++GP+S+L L K  KG  ++F+ L LL K+L +Y E+  +L + G   +Q DEP+LV+DL     QAF   Y +L      L  L+ TYF  +      +LT    V     D  R    L+ + S  PA K
Sbjct:  157 PVILGPLSFLWLGK-CKG--ESFNKLLLLEKLLPVYAEIFEQLSSLGVEWVQVDEPILVLDLPPEWQQAFLTTYQQLN--FFNLKCLLATYFGSLDDNL--SLTCQLPVDGLHIDYCRAPDQLDSVLSQLPAEK 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_VIBCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio cholerae GN=metE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.265e-12
Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = -3
Query:  118 GVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADV 417
            G +  PVL+GP+SYL L K    V + F  L+LLP++LT Y+ ++S+L   G   +Q DEP+L ++L+    +AF  AY   + I   + +L+ TYF  V
Sbjct:  155 GHDVKPVLLGPISYLYLGKE---VEEGFDRLTLLPRLLTAYQAILSKLAKQGVQWVQIDEPILALELEPRWQEAFKLAY---QVIRGDVKLLLTTYFDSV 248          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_SALAR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=metE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.265e-12
Identity = 51/141 (36.17%), Postives = 74/141 (52.48%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GPV+YL L K  KG  + F  L+LL  IL +Y+ V++EL   G   +Q DEP LV++L    L AF  AY   +++   + +L+ TYF  V      T+ +L  V     DL+ G   +  +    PA
Sbjct:  150 ALALGHKIKPVLLGPVTYLWLGK-VKG--EPFDRLTLLKDILPVYQHVLAELAKRGIEWVQIDEPALVLELPQAWLDAFKLAY---DALAGQVKLLLTTYFEGVTPN-LNTIIALP-VQGLHVDLIHGKDDVSELHQRLPA 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_PHOPR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photobacterium profundum GN=metE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.265e-12
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = -3
Query:  118 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADV 429
            AK  G +  PVL+GPVSYL L K  +   + F  LSLLP++L  Y++++S+L+A G   +Q DEP+L ++L     ++F  AY  L        +L+ TYF ++
Sbjct:  154 AKKAGHKVKPVLLGPVSYLWLGKEKE---EGFDRLSLLPRLLAAYQKILSKLEALGVEWVQIDEPVLALELPKPWAESFKLAYQVLN---GNTKLLLTTYFDNI 251          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_YERE8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=metE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.265e-12
Identity = 51/140 (36.43%), Postives = 73/140 (52.14%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            A  LG +  PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V+ EL   G   +Q DEP LV++L    L A+  AY  L+     + +L+ TYF D       T+ +L  V     D+V G   +  + +  P
Sbjct:  150 ALALGHKIKPVLLGPVTYLWLGK-VKG--EQFDRLSLLKDILPVYQQVLGELAKRGIEWVQIDEPALVLELPPEWLDAYQPAYQALQ---GQVKLLLTTYF-DSIGHNLDTIRALP-VQGLHVDVVAGQDDIAKLNAKLP 281          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_SHIFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella flexneri GN=metE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.265e-12
Identity = 51/141 (36.17%), Postives = 74/141 (52.48%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  L     PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALSHNVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDNVVELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_SHIDS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=metE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.265e-12
Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = -3
Query:   46 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG 429
            A  LG    PVL+GPV++L L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G
Sbjct:  150 ALALGHNVKPVLLGPVTWLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHG 269          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECO5E (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=metE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.265e-12
Identity = 49/128 (38.28%), Postives = 72/128 (56.25%), Query Frame = -3
Query:   46 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG 429
            A  LG +  PVL+GP+++L L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G
Sbjct:  150 ALALGHKVKPVLLGPITWLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHG 269          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECO57 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O157:H7 GN=metE PE=3 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 4.265e-12
Identity = 49/128 (38.28%), Postives = 72/128 (56.25%), Query Frame = -3
Query:   46 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG 429
            A  LG +  PVL+GP+++L L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G
Sbjct:  150 ALALGHKVKPVLLGPITWLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHG 269          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BAUCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.265e-12
Identity = 45/141 (31.91%), Postives = 73/141 (51.77%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG    P+L+GP+SYL L K  +   K F  LSLL  +L +Y+++++ L   G   +Q DEP LV++L +    A+ +AY +    L G + L+ T + D        +T+L  V     DL+ G   +E++    P+
Sbjct:  150 ALALGYNIKPILLGPISYLWLGKAKE---KHFDRLSLLSALLPVYQQILALLAQRGIEWVQIDEPALVLELPTAWCNAYYDAYTD---ALQGYSKLLLTTYFDSIGHHLNIITNL-SVHGLHVDLIAGNDDVEVLHRTLPS 283          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_COXB12.500e-1235.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBCH3.265e-1239.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALAR3.265e-1236.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOPR3.265e-1238.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERE84.265e-1236.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIFL4.265e-1236.175-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIDS4.265e-1239.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO5E4.265e-1238.285-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO574.265e-1238.285-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BAUCH4.265e-1231.915-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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