FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BACAA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus anthracis (strain A0248) GN=metE PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.715e-11
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = -3
Query:    1 LGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTK-TLELI-KSGFPAGK 420
            LGV+  PV++GP ++L L   AKG  +     ++L +++  Y +++SEL AAGA  IQ DEP+    L   ++Q   E Y  +   +    +L++TYF  V     + +T    V++ G D V G +  L  I K GFPA K
Sbjct:  148 LGVDGKPVILGPYTFLKL---AKGYTQE-QFATILKQLVAPYVQLLSELHAAGAQIIQVDEPIFA-SLTKEEVQQAKEIYEAIRKEVPNATLLLQTYFDSVEENYEEIITF--PVSSIGLDFVHGKEGNLNAISKYGFPADK 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BUCCC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Cinara cedri GN=metE PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.158e-11
Identity = 39/104 (37.50%), Postives = 57/104 (54.81%), Query Frame = -3
Query:  118 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADV 429
            A  LG +  PVL+GP++YL L K         + L LL KIL IY +V  EL +   + IQ DEP+LV+D+  +  + F   Y  L+     + +L+ TYF D+
Sbjct:  151 ALSLGYKVKPVLLGPLTYLWLGKVKNS---KINKLDLLKKILPIYIQVFKELSSRNINWIQIDEPILVLDIPKNWKKEFQSTYKFLD---GKIKILLATYFGDI 248          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BLOFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia floridanus GN=metE PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.158e-11
Identity = 37/95 (38.95%), Postives = 56/95 (58.95%), Query Frame = -3
Query:  118 PVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADV 402
            PVL+GP++YL + K  +   K F  LSLLP +L +YKE+ + L       IQ DEP LV++L    L+A+  AY +L    + + +L+ TYF  +
Sbjct:  160 PVLLGPLTYLWIGKTKE--TKEFDRLSLLPSLLLVYKEIFNILSKKNIQWIQIDEPALVLELPQTWLKAYLHAYDQLYQ--TKIKLLLTTYFGKI 250          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BACHK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=metE PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.158e-11
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = -3
Query:    1 LGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTK-TLELI-KSGFPAGK 420
            LGV+  PV++GP ++L L   AKG  +     ++L +++  Y +++SEL AAGA  IQ DEP+    L   ++Q   E Y  +   +    +L++TYF  V     + +T    V++ G D V G +  L  I K GFPA K
Sbjct:  148 LGVDGKPVILGPYTFLKL---AKGYTQE-QFATILKQLVAPYVQLLSELHAAGAQIIQVDEPIFA-SLTKEEVQQAKEIYEAIRKEVPNATLLLQTYFDSVEENYEEFITF--PVSSIGLDFVHGKEGNLNAISKYGFPADK 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BACAC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=metE PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.158e-11
Identity = 48/142 (33.80%), Postives = 76/142 (53.52%), Query Frame = -3
Query:    1 LGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTK-TLELI-KSGFPAGK 420
            LGV+  PV++GP ++L L   AKG  +     ++L +++  Y +++SEL AAGA  IQ DEP+    L   ++Q   E Y  +   +    +L++TYF  V     + +T    V++ G D V G +  L  + K GFPA K
Sbjct:  148 LGVDGKPVILGPYTFLKL---AKGYTQE-QFATILKQLVAPYVQLLSELHAAGAQIIQVDEPIFA-SLTKEEVQQAKEIYEAIRKEVPNATLLLQTYFDSVEENYEEIITF--PVSSIGLDFVHGKEGNLNAVSKYGFPADK 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ACICJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidiphilium cryptum (strain JF-5) GN=metE PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.158e-11
Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = -3
Query:   34 TVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGL--NVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTL 408
            T PVL+GPVS+LLL+K   G       L LL ++L  Y +V++EL A G + +Q DEP+L +DL      A   AY   E++  G    +L+ +YFA + A+   T  +L  V     DLVRG   L
Sbjct:  158 TRPVLLGPVSFLLLAKTDDGSDP----LDLLDRLLPCYAQVLAELAAEGCAWVQMDEPVLALDLAPKARAALRHAY---ETLARGATPRLLLASYFAPI-ADNLPTALALP-VAGLHLDLVRGRDDL 275          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_PSEE4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas entomophila (strain L48) GN=metE PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.043e-11
Identity = 49/143 (34.27%), Postives = 68/143 (47.55%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LG    PV+IGP++YL L K  KG    F  L LL ++L +Y ++++ L   G   +Q DEP+L +DL      A+   Y  L+   + L  L+ TYF  +  E    L +   V     DLVR       I    PA K
Sbjct:  151 AKALGHAVKPVVIGPLTYLWLGK-TKGA--DFDKLELLDRLLPLYDQILNRLAVQGVEWVQIDEPILALDLPQDWKNAYERVYNILQR--APLKKLIATYFGGL--EDNLGLAANLPVDGLHIDLVRAPDQYPTILDRLPAYK 286          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BACWK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metE PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.043e-11
Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = -3
Query:    1 KGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTK--TLELIKSGFPAGK 426
            K LGV+  PV++GP ++L L   AKG  +     ++L +++  Y ++ SEL AAGA  IQ DEP+    L   ++    E Y  +   +   N+L++TYF D   E ++ + +   V+  G D V G +     + K GFPA K
Sbjct:  146 KELGVDGKPVILGPYTFLKL---AKGYNEE-QFATILKELVAPYVQLFSELHAAGAQIIQVDEPIFA-SLTKDEINQAKELYEAIHKEVPNANLLLQTYF-DSVEENYEEIIAFP-VSGIGLDFVHGKEGNVNAISKYGFPADK 282          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_BACAA4.715e-1134.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCCC6.158e-1137.505-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOFL6.158e-1138.955-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACHK6.158e-1134.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACAC6.158e-1133.805-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACICJ6.158e-1138.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEE48.043e-1134.275-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACWK8.043e-1133.335-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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