FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:521..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_PARL1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=metE PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 5.201e-18
Identity = 54/143 (37.76%), Postives = 74/143 (51.75%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LGV T PVL+GP S+L L K        F  L L+ ++L +Y+ V+  L  AGA  +Q DEP LV++L S  L     AY+ L +    L ++V TYF  +P  + +T  +L  V     D+VRG    E   S  P  K
Sbjct:  147 AKALGVHTRPVLVGPFSFLKLGK---ATVAGFDPLDLMGRLLPVYENVLKRLAEAGADWVQIDEPCLVLELGSGDLAKCRAAYSALSAAAPSLKLMVATYFGALPEASLETAMALP-VAGIHLDMVRGRSQYEAALSALPRDK 285          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_RHILO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhizobium loti GN=metE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.159e-17
Identity = 54/136 (39.71%), Postives = 80/136 (58.82%), Query Frame = -3
Query:   25 AKGLGVETVPVLIGPVSYLLLSK-PAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI 429
            AK LG+ T PVL+GPV++L L+K P +G    F+ ++LLP++L +Y+E++  LK AGA  +Q DEP LV+DL  ++  A   AY  L      L ++V  YF  +  +  +T  SL  V     DLVR  + LE +
Sbjct:  160 AKALGIHTRPVLLGPVTFLKLAKSPEEG----FNPIALLPRLLPVYEELLRRLKLAGADWVQIDEPALVVDLVPNERDALQFAYCRLSKAAPELKIMVAIYFGSL-GDNLETAISLP-VAGLHVDLVRAPEQLETV 289          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_XYLFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M12) GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.513e-17
Identity = 56/143 (39.16%), Postives = 81/143 (56.64%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A  LG+ T PVL+GPVS+LLLSK   G  +    L LL ++L +Y +++ +L+ +GA  +Q DEP LV+DLD+   QAF +AYA L        +L+ +YF   P      L           DLVRGT+ L+ + +  PAG+
Sbjct:  149 ALALGITTRPVLLGPVSFLLLSKTVDGSNR----LDLLERLLPVYTQLLRQLQESGAEWVQIDEPTLVLDLDAQTQQAFRKAYATLNQ-GPRPKLLLTSYFG--PLGDNLELALQLPADGLHIDLVRGTEQLDAVLNTLPAGR 284          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_XYLFT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.581e-17
Identity = 56/143 (39.16%), Postives = 81/143 (56.64%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A  LG+ T PVL+GPVS+LLLSK   G  +    L LL ++L +Y +++ +L+ +GA  +Q DEP LV+DLD+   QAF +AYA L        +L+ +YF   P      L           DLVRGT+ L+ + +  PAG+
Sbjct:  149 ALALGITTRPVLLGPVSFLLLSKTVDGSNR----LDLLERLLPVYTQLLRQLQESGAEWVQIDEPTLVLDLDAQTQQAFRKAYAILNQ-GPRPKLLLTSYFG--PLGDNLELALQLPADGLHIDLVRGTEQLDAVLNTLPAGR 284          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_XYLF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M23) GN=metE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.581e-17
Identity = 56/143 (39.16%), Postives = 81/143 (56.64%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A  LG+ T PVL+GPVS+LLLSK   G  +    L LL ++L +Y +++ +L+ +GA  +Q DEP LV+DLD+   QAF +AYA L        +L+ +YF   P      L           DLVRGT+ L+ + +  PAG+
Sbjct:  149 ALALGITTRPVLLGPVSFLLLSKTVDGSNR----LDLLERLLPVYTQLLRQLQESGAEWVQIDEPTLVLDLDAQTQQAFRKAYAILNQ-GPRPKLLLTSYFG--PLGDNLELALQLPADGLHIDLVRGTEQLDAVLNTLPAGR 284          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_STRGG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metE PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.750e-17
Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = -3
Query:  127 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYF 429
            A  LG    PVL+GP++YLLL+K A GVA  F  L+LL ++L +Y E++++L+AAGA+ +Q DEP LV D    +L A + AY EL        +LV +YF
Sbjct:  153 ALALGWTPRPVLVGPLTYLLLAKAAPGVAADFEPLTLLDRLLPVYAEILADLRAAGATWVQLDEPALVQDRTPAELNAAARAYRELGGRADRPQLLVASYF 253          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_SCHPO (Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Schizosaccharomyces pombe GN=SPAC9.09 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.809e-17
Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = -3
Query:   31 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYG--FDLVRGTKTLE 429
            AK  G+ T PVL+GPV+YL ++K AKG   +   + LLPK+L +Y E+I +L  AGA  IQ DEP+L +DL    L ++ EAY  L  I     +++ TYF  + + A      LKG+   G   D+VR  + L+
Sbjct:  154 AKEAGIITRPVLVGPVTYLFIAKAAKG--SSIKPIELLPKLLPVYVELIKKLTEAGAEYIQIDEPILTLDLPQEILASYKEAYETLGKI---GKLILTTYFGSLQSNA----DVLKGLPIAGVHVDVVRAPENLD 279          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_NITWN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=metE PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.809e-17
Identity = 55/140 (39.29%), Postives = 72/140 (51.43%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            AK LG +T PVL+GPV+YL L K           LSLLP +L +Y +V+  L A GA  +Q DEP LV+DLD    +    AY +L   L  L V++ TYF  +  +      SL  VT    DL R    LE + +  P
Sbjct:  161 AKALGYQTRPVLLGPVTYLKLGKSKDA---NLDPLSLLPDLLPVYIDVLKRLAAEGAEWVQIDEPCLVLDLDDATRKVLRAAYEQLADALPKLKVMLTTYFGGL-GDNLDAALSLP-VTGLHIDLARAPDQLEAVAAKAP 295          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_RALEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16
Identity = 57/141 (40.43%), Postives = 78/141 (55.32%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG+   PVLIGPV+YL LSK        F  L+LLP++L  Y+ ++ +LKA G   +Q DEP L +DL+   L AF  AYA L    +G  +L+ TYF D  A+  Q   +L  V  +  DLVR  + L   ++  PA
Sbjct:  145 ALALGLRARPVLIGPVTYLWLSKSH---VAGFDRLALLPQLLQGYRRILDQLKARGIEWVQIDEPALCLDLEPAWLDAFDTAYAALRE--AGPKLLLATYF-DTAADHAQRAAALP-VDGFHIDLVRAPEQLAAWQAALPA 278          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_RALEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16
Identity = 57/141 (40.43%), Postives = 78/141 (55.32%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG+   PVLIGPV+YL LSK        F  L+LLP++L  Y+ ++ +LKA G   +Q DEP L +DL+   L AF  AYA L    +G  +L+ TYF D  A+  Q   +L  V  +  DLVR  + L   ++  PA
Sbjct:  145 ALALGLRARPVLIGPVTYLWLSKSH---VAGFDRLALLPQLLQGYRRILDQLKARGIEWVQIDEPALCLDLEPAWLDAFDTAYAALRE--AGPKLLLATYF-DTAADHAQRAAALP-VDGFHIDLVRAPEQLAAWQAALPA 278          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_PARL15.201e-1837.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHILO1.159e-1739.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFM1.513e-1739.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFT2.581e-1739.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLF22.581e-1739.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGG5.750e-1745.545-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SCHPO9.809e-1740.00Probable 5-methyltetrahydropteroyltriglutamate--ho... [more]
METE_NITWN9.809e-1739.295-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEU1.281e-1640.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEH1.281e-1640.435-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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