FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:521..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_METCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Methylococcus capsulatus GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.868e-16
Identity = 56/143 (39.16%), Postives = 75/143 (52.45%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK L +   PVLIGP++YL L K  +     FS L LLP++L  Y  ++  L A+G   +Q DEP+L MDL    L+AF+ AYA L    +G  +L+ TYFA V   A    +S   V     D VR  + +      FPA K
Sbjct:  145 AKALRLNPKPVLIGPLTYLHLGKERQA---GFSRLELLPRLLPAYAAILRRLHASGVPWVQMDEPILGMDLPPEWLEAFAPAYAALAE--AGPKLLLATYFASVAEHAVWLKSS--AVAGLHIDAVRAPEQVADFLKDFPADK 280          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_THEYD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=metE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.084e-15
Identity = 55/141 (39.01%), Postives = 81/141 (57.45%), Query Frame = -3
Query:    1 LGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLE-LIKSGFPAGK 420
            L V+T PV++GP +YL   K AK        LS   KIL  YK+++ +L AAG   IQ DEP +VMD++  +++  +  Y EL   L+ L V ++TY+  V   A++ L     V  +GFDLV G + LE ++  GFP+ K
Sbjct:  147 LSVKTKPVIVGPFTYL---KSAKLNMDRVERLS--EKILPAYKKLLIKLDAAGVEEIQIDEPAMVMDMEEREIELLTGLYRELTKGLT-LKVYIQTYYEAV--SAYEKLVFSLSVHGFGFDLVDGKENLENILTLGFPSDK 279          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_NEIMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup A GN=metE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.416e-15
Identity = 52/133 (39.10%), Postives = 77/133 (57.89%), Query Frame = -3
Query:   31 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLE 429
            A+ LG++  P ++GP+++L + K  KG  + F  LSLLPK+L +Y E+++ L  AGA  IQ DEP L +DL    ++A+ + YA L  +     +L+ TYF  V AE    L SL  V     DLVR  + L+
Sbjct:  145 AQALGLKAKPTVVGPLTFLWVGKE-KGAVE-FDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALTVDLPKEWVEAYKDVYATLSKV--SAKILLSTYFGSV-AEHAALLKSLP-VDGLHIDLVRAPEQLD 271          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_LISMF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.850e-15
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = -3
Query:    1 KGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLV--RGTKTLELIKSGFPAGK 426
            K LG+E  PVL+GP++YL L K +   AK+F +L  L K +  Y E++ EL+AAGA  +Q DEP L    D  ++  F + Y   ++ +  L + ++TYF  +  + ++ + +L  V A G D V   G     L   GFP  K
Sbjct:  148 KELGIEGKPVLVGPITYLKLGKGSD--AKSFEVL--LDKFIPAYVEILKELEAAGAKWVQIDEPYLATSFDKKEIALFEKVYQAFQTAVPNLKIELQTYFESL--DYYEEVVNLP-VAAIGIDFVHDHGDSIKALKAHGFPEDK 284          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_LISMC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=metE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.850e-15
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = -3
Query:    1 KGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLV--RGTKTLELIKSGFPAGK 426
            K LG+E  PVL+GP++YL L K +   AK+F +L  L K +  Y E++ EL+AAGA  +Q DEP L    D  ++  F + Y   ++ +  L + ++TYF  +  + ++ + +L  V A G D V   G     L   GFP  K
Sbjct:  148 KELGIEGKPVLVGPITYLKLGKGSD--AKSFEVL--LDKFIPAYVEILKELEAAGAKWVQIDEPYLATSFDKKEIALFEKVYQAFQTAVPNLKIELQTYFESL--DYYEEVVNLP-VAAIGIDFVHDHGDSIKALKAHGFPEDK 284          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 80.8777 bits (198), Expect = 2.416e-15
Identity = 52/135 (38.52%), Postives = 76/135 (56.30%), Query Frame = -3
Query:   31 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKG--VTAYGFDLVRGTKTLE 429
            AK LG+ T PVL+GPVSYL L K  K  +     LSLL ++L +Y E++S+L +AGA+ +Q DEP+LV+DL ++   A  +AY       +   + + TYF  V       L ++KG  V A   D VR  +  +
Sbjct:  154 AKELGIHTRPVLLGPVSYLFLGKADKD-SLDLEPLSLLEQLLPLYTEILSKLASAGATEVQIDEPVLVLDLPANAQAAIKKAYTYFGEQSNLPKITLATYFGTV----VPNLDAIKGLPVAALHVDFVRAPEQFD 283          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_NEIMB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup B GN=metE PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.416e-15
Identity = 49/133 (36.84%), Postives = 74/133 (55.64%), Query Frame = -3
Query:   31 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLE 429
            A+ LG++  P ++GP+++L + K  KG  + F  LSLLPK+L +Y E+++ L  AGA  IQ DEP L +DL    ++A+ + YA L  +     +L+ TYF  V   A   L     V     DLVR  + L+
Sbjct:  145 AQALGLKAKPTVVGPLTFLWVGKE-KGAVE-FDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALAVDLPKEWVEAYKDVYATLSKV--SAKILLSTYFGSVAEHA--ALLKALPVDGLHIDLVRAPEQLD 271          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_CAUCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Caulobacter crescentus GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.121e-15
Identity = 54/133 (40.60%), Postives = 71/133 (53.38%), Query Frame = -3
Query:   31 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLE 429
            AK LGV T PVL+GPV++L L   AK  A+ FS LSLL  +L +Y +V+  L AAGA  +Q DEP L +DL   +      AY  L     G+ +++ +YF     E   T  +L  V     DLVR    LE
Sbjct:  165 AKALGVHTRPVLLGPVTFLKL---AKTKAEGFSPLSLLSALLPVYGQVLRGLAAAGADWVQIDEPCLALDLTDFERAELRRAYGALTHAAPGVRLMLTSYFGGY-GENLATAVNLP-VEGLHLDLVRAPDELE 292          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BURXL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia xenovorans (strain LB400) GN=metE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.121e-15
Identity = 55/141 (39.01%), Postives = 78/141 (55.32%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  L +   PVLIGP++YL LSK        F  LSLLPK++  Y  ++ +L+ +G   +Q DEP L +DL +  L AFS AY  L +  SG+ VL+ TYF +  AE    + +L  V     DLVR  + L+  ++  PA
Sbjct:  145 ALALNLPVKPVLIGPITYLWLSKSH---VAGFDRLSLLPKLVIRYARLLDKLRQSGIEWVQLDEPALCVDLPAEWLDAFSAAYEVLGT--SGVKVLLATYF-ESAAEHAPRVAALP-VAGVHLDLVRAPQQLDAWRAALPA 278          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_NEIG1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=metE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.382e-15
Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = -3
Query:   31 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLE 429
            A+ LG++  P ++GP+++L + K    V   F  LSLLPK+L +Y E+++ L  AGA  IQ DEP L +DL    ++A+ + YA L  +     +L+ TYF  V AE    L SL  V     DLVR  + L+
Sbjct:  145 AQTLGLKAKPTVVGPLTFLWVGKEKGSVE--FDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALAVDLPKEWVEAYKDVYATLNKV--SAKILLGTYFGSV-AEHAALLKSLP-VDGLHIDLVRAPEQLD 271          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_METCA4.868e-1639.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEYD1.084e-1539.015-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMA1.416e-1539.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMF1.850e-1535.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMC1.850e-1535.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YEAST2.416e-1538.525-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMB2.416e-1536.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAUCR4.121e-1540.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURXL4.121e-1539.015-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIG15.382e-1538.355-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
back to top