FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_NEIMF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=metE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 9.181e-15
Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = -3
Query:   31 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLE 429
            A+ LG++  P ++GP+++L + K  KG  + F+ LSLL K+L +Y E+++ L  AGA  IQ DEP L +DL    ++A+ + YA L  +     +L+ TYF  V AE    L SL  V     DLVR  + L+
Sbjct:  145 AQALGLKAKPTVVGPLTFLWVGKE-KGTVE-FNRLSLLQKLLPVYVEILNALVEAGAEWIQIDEPALTVDLPKEWVEAYKDVYATLSKV--SAKILLSTYFGSV-AEHAALLKSLP-VDGLHIDLVRAPEQLD 271          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_PSEU5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=metE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.199e-14
Identity = 59/146 (40.41%), Postives = 74/146 (50.68%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVA---KTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            AK LG    PVLIGP+SYL L K  KG A   +TF  L LL ++L +Y EV+  L A G   +Q DEP+L +DL      AF  AY  L+   + L  LV TYF  +  E    L +   V     DLVR  +   +I    PA K
Sbjct:  150 AKALGHAIKPVLIGPLSYLWLGK-LKGEADQTQTFDKLELLDRLLPVYGEVLDRLAAQGVEWVQIDEPILALDLPQDWKNAFERAYNLLQR--APLKKLVATYFGGL--EDNLGLAATLPVDGLHIDLVRAPEQYPVILDRLPAYK 290          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_PSESM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas syringae pv. tomato GN=metE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.199e-14
Identity = 56/143 (39.16%), Postives = 74/143 (51.75%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A  LG +  PVLIGP++YL L K AKG   +F  L LL ++L +Y E++  L A G   +QFDEP+L +DL      AF  AY  L+   S L  LV TYF  +  E    L +   V     DLVR  + L  +    P+ K
Sbjct:  157 AHALGHKVKPVLIGPLTYLWLGK-AKG--DSFDRLELLDRLLPVYGEILGRLAAQGVEWVQFDEPVLTLDLPQDWKTAFERAYHSLQ--YSPLKKLVATYFGGL--EDNLGLAATLPVDGLHIDLVRAPEQLPAVLDRLPSYK 292          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_NEIM0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup C (strain 053442) GN=metE PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.566e-14
Identity = 48/127 (37.80%), Postives = 71/127 (55.91%), Query Frame = -3
Query:   49 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVR 429
            A+ LG++  P ++GP+++L + K  KG  + F  LSLLPK+L +Y E+++ L  AGA  IQ DEP L +DL    ++A+ + YA L  +     +L+ TYF  V   A   L     V     DLVR
Sbjct:  145 AQALGLKAKPTVVGPLTFLWVGKE-KGAVE-FDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALTVDLPKEWVEAYKDVYATLSKV--SAKILLGTYFGSVAEHA--ALLKALPVDGLHIDLVR 265          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_LISMO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes GN=metE PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.566e-14
Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = -3
Query:    1 KGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG-TKTLELIKS-GFPAGK 426
            K LG+E  PVL+GPV+YL L K     A+ F   +LL K +  Y E++ EL+ AGA  +Q DEP L    D  +++ F + Y   ++ +  L + ++TYF  +  + ++ + +L  V A G D V     +LE +K+ GFP  K
Sbjct:  148 KELGIEGKPVLVGPVTYLKLGKGND--AENFE--ALLDKFIPAYVEILKELERAGAKWVQIDEPYLATSFDKSEIKLFEKVYQAFQTAVPNLKIELQTYFESL--DYYEEVVNLP-VAAIGIDFVHDHGDSLEALKAHGFPEDK 284          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_AERS4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Aeromonas salmonicida (strain A449) GN=metE PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.566e-14
Identity = 54/141 (38.30%), Postives = 74/141 (52.48%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            AK LG+    VL+GPVSYL L K  +     FS L LL ++L +Y+E++++L A G   +Q DEP L +DL      A+  AY   E +     +L+ TYF  V A     +TSLK V     DLV   + LE +    PA
Sbjct:  147 AKALGLPVKAVLLGPVSYLWLGKEKES---GFSRLELLDRLLIVYQEILAKLAAQGVEWVQIDEPALALDLPDEWRLAYLNAY---ERLSGPCKLLLTTYFGSV-AHQRDIITSLK-VDGLHLDLVAAPEQLETLVPHLPA 279          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_DESRM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=metE PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.045e-14
Identity = 52/138 (37.68%), Postives = 76/138 (55.07%), Query Frame = -3
Query:   19 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*-IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKS 429
            AK  G+ T   LIGP+++L LSKP  G   T   L LLPKIL  Y  ++ ++        IQFDEP++V D+D   L  F   Y EL ++ + L ++V TYF D   EA + L+ +  +   G D V G + L+++ S
Sbjct:  146 AKEYGLRTKINLIGPITFLSLSKPVDGNQDT---LELLPKILPCYVSLLKKIADLDDEVYIQFDEPIVVKDIDRRTLNLFYLCYKELSNVSNRLRLIVMTYF-DHAVEAVKILSDIP-IYGIGLDFVYGQENLKVLDS 278          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BURPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metE PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.045e-14
Identity = 53/140 (37.86%), Postives = 72/140 (51.43%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            A  L +   PVLIGP++YL LSK        F  LSLLPK++  Y  ++ +LK  G   +Q DEP L +DL    L AFS AY  L +  SG+ VL+ TYF      A     ++  V     DLVR  + L+  ++  P
Sbjct:  145 ALALNLPVKPVLIGPITYLWLSKSH---VAGFDRLSLLPKLVIRYSRLLEKLKQRGIEWVQLDEPALCVDLPVEWLDAFSAAYDVLGT--SGVKVLLATYFESAAEHA--PRVAVLPVAGVHLDLVRAPQQLDAWRAALP 277          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_LACLA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. lactis GN=metE PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.671e-14
Identity = 47/144 (32.64%), Postives = 76/144 (52.78%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI-KSGFPAGK 429
            AK  G ET P +IGP ++L+L+    G  K     ++L  ++  ++ ++ EL   G   +Q +EP LV+D    + + F   Y EL    + LN+L++TYF DV  ++++ +  L      G D + G  +L LI K GFP  K
Sbjct:  149 AKSAGFETRPTIIGPYTFLVLADYKSGATKD----TVLSDVIVAFQTLLKELNQLGVEWLQIEEPALVLDQTEEEKKLFVSIYEELLKSKNNLNILLQTYFGDV-RDSYKEIIKL-DFDGIGLDFIEGRDSLALIQKYGFPKKK 286          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_THIDA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.489e-14
Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A+  GV   PV+IGPV+YL L K   G  K    L LL ++L +Y E++  L  AGA  +Q DEPLLV +L++    AF+ AY  L++  S + +L+ TYF  +    +  L +   V     D + G   +E +    PA K
Sbjct:  156 AQAAGVRAKPVIIGPVTYLALGKAKDGSDK----LGLLDRLLPVYVELLEALAGAGAEWVQIDEPLLVTELNAEWQHAFNRAYHALKA--SRVKLLLATYFGQLLENRY--LAATLPVAGLHVDAISGRDDVEPLLGLLPAHK 290          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_NEIMF9.181e-1538.355-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEU51.199e-1440.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSESM1.199e-1439.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIM01.566e-1437.805-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMO1.566e-1435.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_AERS41.566e-1438.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESRM2.045e-1437.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPP2.045e-1437.865-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLA2.671e-1432.645-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THIDA3.489e-1435.665-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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