FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:521..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ENT38 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sp. (strain 638) GN=metE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.261e-13
Identity = 53/141 (37.59%), Postives = 74/141 (52.48%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG    PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L AF  AY   +++     +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHNIKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGVEWVQIDEPALVLELPQEWLDAFKPAY---DALTGQTKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDEVAELNKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_CITK8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=metE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.261e-13
Identity = 52/141 (36.88%), Postives = 76/141 (53.90%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GPV+YL L K  KG  ++F  LSLL  IL +YK+V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+ +L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHKVKPVLLGPVTYLWLGK-VKG--ESFDRLSLLNDILPVYKQVLTELAKRGVEWVQIDEPALVLELPQEWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTIAALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_MYCTU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.953e-13
Identity = 49/131 (37.40%), Postives = 65/131 (49.62%), Query Frame = -3
Query:   37 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKT 429
            A G G+   PV+IGP+++LLLSK   G       +  L +++ +Y E++S L   GA  +QFDEP LV DL           Y  L S+ +   + V TYF D P  A   L     V A G DLV G  T
Sbjct:  151 ALGQGIPARPVIIGPITFLLLSKAVDGAGAP---IERLEELVPVYSELLSLLADGGAQWVQFDEPALVTDLSPDAPALAEAVYTALCSVSNRPAIYVATYFGD-PGAALPALARTP-VEAIGVDLVAGADT 276          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_MYCTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.953e-13
Identity = 49/131 (37.40%), Postives = 65/131 (49.62%), Query Frame = -3
Query:   37 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKT 429
            A G G+   PV+IGP+++LLLSK   G       +  L +++ +Y E++S L   GA  +QFDEP LV DL           Y  L S+ +   + V TYF D P  A   L     V A G DLV G  T
Sbjct:  151 ALGQGIPARPVIIGPITFLLLSKAVDGAGAP---IERLEELVPVYSELLSLLADGGAQWVQFDEPALVTDLSPDAPALAEAVYTALCSVSNRPAIYVATYFGD-PGAALPALARTP-VEAIGVDLVAGADT 276          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_MYCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.953e-13
Identity = 49/131 (37.40%), Postives = 65/131 (49.62%), Query Frame = -3
Query:   37 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKT 429
            A G G+   PV+IGP+++LLLSK   G       +  L +++ +Y E++S L   GA  +QFDEP LV DL           Y  L S+ +   + V TYF D P  A   L     V A G DLV G  T
Sbjct:  151 ALGQGIPARPVIIGPITFLLLSKAVDGAGAP---IERLEELVPVYSELLSLLADGGAQWVQFDEPALVTDLSPDAPALAEAVYTALCSVSNRPAIYVATYFGD-PGAALPALARTP-VEAIGVDLVAGADT 276          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_MYCBO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.953e-13
Identity = 49/131 (37.40%), Postives = 65/131 (49.62%), Query Frame = -3
Query:   37 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKT 429
            A G G+   PV+IGP+++LLLSK   G       +  L +++ +Y E++S L   GA  +QFDEP LV DL           Y  L S+ +   + V TYF D P  A   L     V A G DLV G  T
Sbjct:  151 ALGQGIPARPVIIGPITFLLLSKAVDGAGAP---IERLEELVPVYSELLSLLADGGAQWVQFDEPALVTDLSPDAPALAEAVYTALCSVSNRPAIYVATYFGD-PGAALPALARTP-VEAIGVDLVAGADT 276          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_KLEP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae (strain 342) GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.953e-13
Identity = 52/141 (36.88%), Postives = 79/141 (56.03%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L+AF  AY   +++   + +L+ TYF  + ++   T+ +L  V     DLV G   +  + +  PA
Sbjct:  150 ALALGHKIKPVLLGPVTYLWLGK-VKG--EPFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPPAWLEAFKPAY---DALQGQVKLLLTTYFEGI-SDNLATIAALP-VQGLHVDLVHGKDDVAELHNRLPA 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECOLU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.953e-13
Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A+ LG +  PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 AQALGHKVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BIFA0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=metE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.953e-13
Identity = 47/129 (36.43%), Postives = 70/129 (54.26%), Query Frame = -3
Query:   46 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAE-LESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG 429
            AK LG+ET PVLIGP ++L LS+ A+    T     L+  +  +Y EV+      GA  +Q DEP LV+D     +  F   Y+  L +  SG+ VL+ TYF ++ A+ ++T+  L      G DL+ G
Sbjct:  150 AKSLGIETKPVLIGPYTFLKLSRDAEAQELTID-EGLVDAVADVYAEVLRRFAKLGAQWVQLDEPYLVLDKHEGDVSLFKSLYSRLLPARDSGVRVLLNTYFGNI-ADIYETV-KLFEFDGVGLDLIEG 275          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_SERP5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Serratia proteamaculans (strain 568) GN=metE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.857e-13
Identity = 53/140 (37.86%), Postives = 74/140 (52.86%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            A  LG +  PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L AF  AY   +++   + +L+ TYF D       TL  L  V     DLV G   + ++    P
Sbjct:  150 ALALGHKIKPVLLGPVTYLWLGK-VKG--EPFDRLSLLNDILPVYQQVLAELAKRGVEWVQIDEPALVLELPQAWLNAFKPAY---DALQGQVKLLLTTYF-DSVGHNLDTLRELP-VQGLHVDLVGGHDDIAVLNKALP 281          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_ENT382.261e-1337.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CITK82.261e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTU2.953e-1337.405-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTA2.953e-1337.405-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBP2.953e-1337.405-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBO2.953e-1337.405-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP32.953e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOLU2.953e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFA02.953e-1336.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SERP53.857e-1337.865-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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