FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_RHOSR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodococcus sp. (strain RHA1) GN=metE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.857e-13
Identity = 46/135 (34.07%), Postives = 71/135 (52.59%), Query Frame = -3
Query:   25 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI 429
            A+ L +   PV++GPV++LLLSK    V     LL  L +++ +Y +++  L  AGA  +Q DEP LV D +  ++ A   AY  L  +     +LV +YF  +  +A   + S  GV     DLV G+ TL  +
Sbjct:  146 ARALDIPARPVVVGPVTFLLLSK---AVGSDAPLLDRLDELVPLYADLLGRLAGAGADWVQIDEPALVADRNPKEIAAAKRAYDRLSGLELRPAILVASYFGSL-GDALPAIAS-TGVEGIAIDLVAGSDTLATV 275          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_PSEAB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=metE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.857e-13
Identity = 55/143 (38.46%), Postives = 72/143 (50.35%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A+ LG +  PVLIGP++YL L K AKG    F  L LL ++L +Y +++  L   G   +Q DEP+LV+DL      AF  AY  L+S    L  LV TYF  +  E    L +   V     DLVR  +    I    PA K
Sbjct:  152 ARALGHQVKPVLIGPLTYLWLGK-AKGAE--FDRLDLLDRLLPLYGQILRRLAGQGVEWVQIDEPILVLDLPQAWKNAFERAYNLLQS--EPLKKLVATYFGGL--EDNLGLAANLPVDGLHIDLVRAPEQYPSILDRLPAYK 287          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_PHOLL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=metE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.857e-13
Identity = 52/140 (37.14%), Postives = 75/140 (53.57%), Query Frame = -3
Query:   10 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP 429
            A  LG +  PVL+GP++YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L +  L A+  AY  L+     + +L+ TYF D      +T+ SL  V     DLV G   +  +    P
Sbjct:  150 ALSLGHQVKPVLLGPITYLWLGK-VKG--QVFDRLSLLQDILPVYQQVLAELAKRGIEWVQIDEPALVLELPAEWLTAYPIAYQALQ---GQVKLLLTTYF-DSIGHNLETIKSLP-VQGLHVDLVAGQDDIAQLHESLP 281          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_LACLM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.857e-13
Identity = 47/144 (32.64%), Postives = 76/144 (52.78%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI-KSGFPAGK 429
            AK  G ET P +IGP ++L+L+    GV +     ++L  ++  Y  +  +L   G   +Q +EP LV+D    + Q F + Y EL    + L VL++TYF D+   ++Q +  L      G D V G ++++L+ K GFP  K
Sbjct:  147 AKTAGFETRPTIIGPYTFLILADYLSGVTED----AILSDLIGAYTILFDQLNNLGGEWLQIEEPALVLDQTEEEQQLFIKIYQELLKNKNKLRVLLQTYFGDL-RNSYQEIIKL-DFDGIGLDFVEGRESVKLVQKYGFPKNK 284          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ERWT9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.857e-13
Identity = 52/141 (36.88%), Postives = 76/141 (53.90%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GPV+YL L K  KG    F  L+LL  IL +Y++V++EL       +Q DEP L ++L +  L AF  AY   +++     +L+ TYF D   +   T+++L  V     DLV G   + L+ S  PA
Sbjct:  150 ALALGHKVKPVLLGPVTYLWLGK-VKG--DPFDRLNLLQDILPVYRQVLAELAKRDIEWVQIDEPALALELPAEWLAAFKPAY---DALQGQTKLLLTTYF-DSIGQNLDTISALP-VQGLHVDLVHGKDAITLLNSKVPA 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BURS3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia sp. (strain 383) GN=metE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.857e-13
Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = -3
Query:  118 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADV 429
            A+  GV   PV++GPV+YL L K      +    L+LLPK+L +Y  ++  L A G   +Q DEP+LV +LD+   QAF  AYA LE+    + VL+ TYF  +
Sbjct:  154 AQAQGVAAKPVIVGPVTYLWLGKAKDDSDR----LALLPKLLPVYGALLDTLTAQGVEWVQIDEPILVTELDAAWQQAFRTAYAALET--RRIKVLLATYFGQL 251          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_PSEA8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=metE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.038e-13
Identity = 53/143 (37.06%), Postives = 70/143 (48.95%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A+ LG +  PVLIGP++YL L K   G    F  L LL ++L +Y +++  L   G   +Q DEP+LV+DL      AF  AY  L+S    L  LV TYF  +  E    L +   V     DLVR  +    I    PA K
Sbjct:  152 ARALGHQVKPVLIGPLTYLWLGK---GKGAEFDRLDLLDRLLPLYGQILRRLAGQGVEWVQIDEPILVLDLPQAWKNAFERAYNLLQS--EPLKKLVATYFGGL--EDNLGLAANLPVDGLHIDLVRAPEQYPSILDRLPAYK 287          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_KLEP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=metE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.038e-13
Identity = 52/141 (36.88%), Postives = 79/141 (56.03%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GPV+YL L K  KG  + F  L+LL  IL +Y++V++EL   G   +Q DEP LV++L    L+AF  AY   +++   + +L+ TYF  V ++   T+ +L  V     DLV G   +  + +  PA
Sbjct:  150 ALALGHKIKPVLLGPVTYLWLGK-VKG--EPFDRLTLLNTILPVYQQVLAELAKRGIDWVQIDEPALVLELPPAWLEAFQPAY---DALQGQVKLLLTTYFEGV-SDNLATIAALP-VQGLHVDLVHGKDDVAELHNRLPA 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BURA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=metE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.038e-13
Identity = 43/101 (42.57%), Postives = 60/101 (59.41%), Query Frame = -3
Query:  127 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYF 429
            A+ LGV   PV++GPV+YL L K      +    L+LLPK+L +Y  ++  L A G   +Q DEP+LV +LD+   QA   AYA LE+    + VL+ TYF
Sbjct:  154 ARALGVAGKPVILGPVTYLWLGKAKDDSDR----LALLPKLLPVYGALLDTLTAQGVEWVQIDEPILVTELDAEWRQALRTAYAALET--RRIKVLLATYF 248          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BIFLI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.038e-13
Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = -3
Query:    4 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG-TKTLELI-KSGFPAG 429
            AK LGVET PV IGP ++L L++  +          L+  +  +Y EV++     GA+ +Q DEP LV+D +   ++ F   Y ++      + VL+ TYF  + A+ ++T+ +L G    G DL  G  + LE + K G  AG
Sbjct:  150 AKSLGVETKPVFIGPYTFLKLARTPEAAELEIDK-GLVNAVAAVYAEVLARFNDLGAAWVQLDEPYLVLDKEPGDVELFKALYTKILPAKGNVKVLLNTYFGHI-ADVYETV-NLFGFDGIGLDLNEGREENLEAVAKYGVAAG 290          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_RHOSR3.857e-1334.075-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEAB3.857e-1338.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOLL3.857e-1337.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLM3.857e-1332.645-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ERWT93.857e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURS33.857e-1341.355-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA85.038e-1337.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP75.038e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURA45.038e-1342.575-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLI5.038e-1333.335-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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