FC922034

Overview
NameFC922034
Unique NameFC922034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:521..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_PSEF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13
Identity = 53/143 (37.06%), Postives = 71/143 (49.65%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A+ LG    PVLIGP++YL L K AKG    F  L LL ++L +Y ++   L A G   +Q DEP+LV+DL      AF  AY +++     L  L+ TYF  +  E    L +   V     DLVR  +    I    PA K
Sbjct:  150 ARALGHAVKPVLIGPLTYLWLGK-AKGAE--FDKLELLDRLLPLYGQIFQRLAAQGVEWVQIDEPILVLDLPQDWKNAFERAYNQIQR--EPLKKLLATYFGGL--EENLGLAANLPVDGLHIDLVRAPEQYPTILDRLPAYK 285          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_PSEAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa GN=metE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13
Identity = 55/143 (38.46%), Postives = 71/143 (49.65%), Query Frame = -3
Query:    1 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGK 429
            A+ LG +  PVLIGP++YL L K AKG    F  L LL ++L +Y ++   L   G   +Q DEP+LV+DL      AF  AY  L+S    L  LV TYF  +  E    L +   V     DLVR  +    I    PA K
Sbjct:  152 ARALGHQVKPVLIGPLTYLWLGK-AKGAE--FDRLDLLDRLLPLYGQIFRRLAGQGVEWVQIDEPILVLDLPQAWKNAFERAYNLLQS--EPLKKLVATYFGGL--EDNLGLAANLPVDGLHIDLVRAPEQYPSILDRLPAYK 287          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ESCF3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=metE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13
Identity = 52/141 (36.88%), Postives = 76/141 (53.90%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHKVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECOSM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=metE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13
Identity = 52/141 (36.88%), Postives = 76/141 (53.90%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHKVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECOL5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13
Identity = 52/141 (36.88%), Postives = 76/141 (53.90%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHKVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_ECO7I (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13
Identity = 52/141 (36.88%), Postives = 76/141 (53.90%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A  LG +  PVL+GPV+YL L K  KG  + F  LSLL  IL +Y++V++EL   G   +Q DEP LV++L    L A+  AY   +++   + +L+ TYF  V      T+T+L  V     DLV G   +  +    P+
Sbjct:  150 ALALGHKVKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAY---DALQGQVKLLLTTYFEGVTPN-LDTITALP-VQGLHVDLVHGKDDVAELHKRLPS 282          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BURCC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=metE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13
Identity = 48/141 (34.04%), Postives = 71/141 (50.35%), Query Frame = -3
Query:    7 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPA 429
            A   GV   PV++GPV+YL L K      +    L+LLPK+L +Y  ++  L A G   +Q DEP+LV +LD+   QAF  AYA LE+    + +L+ TYF  +      TL +   V     D +     ++ +    PA
Sbjct:  154 ANAQGVNAKPVILGPVTYLWLGKAKDDSDR----LALLPKLLPVYGALLDTLTAQGVEWVQIDEPILVTELDAEWRQAFRIAYAALET--RRIKLLLATYFGQLQDNL--TLAASLPVDGLHIDAINARDEVDALVRELPA 286          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BIFLO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum GN=metE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13
Identity = 41/128 (32.03%), Postives = 70/128 (54.69%), Query Frame = -3
Query:   46 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG 429
            AK LG++T PV IGP ++L L++  +          L+  +  +Y EV+++    GA+ +Q DEP LV+D +   ++ F   Y ++ S    + VL+ TYF  + A+ ++T+ +L G    G DL  G
Sbjct:  150 AKALGIDTKPVFIGPYTFLKLARTPEATELELDK-GLVNAVAAVYVEVLAKFNELGAAWVQLDEPYLVLDKEPGDVELFKTLYTKILSAKGNVKVLLNTYFGHI-ADVYETV-NLLGFDGIGLDLNEG 274          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_BIFLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum (strain DJO10A) GN=metE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.579e-13
Identity = 41/128 (32.03%), Postives = 70/128 (54.69%), Query Frame = -3
Query:   46 AKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG 429
            AK LG++T PV IGP ++L L++  +          L+  +  +Y EV+++    GA+ +Q DEP LV+D +   ++ F   Y ++ S    + VL+ TYF  + A+ ++T+ +L G    G DL  G
Sbjct:  150 AKALGIDTKPVFIGPYTFLKLARTPEATELELDK-GLVNAVAAVYVEVLAKFNELGAAWVQLDEPYLVLDKEPGDVELFKTLYTKILSAKGNVKVLLNTYFGHI-ADVYETV-NLLGFDGIGLDLNEG 274          
BLAST of FC922034 vs. ExPASy Swiss-Prot
Match: METE_VIBPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio parahaemolyticus GN=metE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 48/138 (34.78%), Postives = 74/138 (53.62%), Query Frame = -3
Query:    4 GVETVPVLIGPVSYLLLSKPAKGVAKTFSLLSLLPKILTIYKEVISELKAAGAS*IQFDEPLLVMDLDSHKLQAFSEAYAELESILSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAG 417
            G +  PVL+GPVSYL L K    V + F  L+LLP++LT Y+ ++++L + G   +Q DEP+L ++L+     AF  AY   + I S + VL+ TYF D   +    +  L  V     DL    + L+ + +  P G
Sbjct:  155 GHKVKPVLLGPVSYLYLGKE---VEEGFDRLTLLPRLLTAYQAILAKLASQGVEWVQIDEPILSLELEKQWADAFKLAY---QLIRSDVKVLLTTYF-DSVTDTLDKIVELP-VDGLHVDLSAAPQQLDDVVAKLPEG 284          
The following BLAST results are available for this feature:
BLAST of FC922034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
METE_PSEF56.579e-1337.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEAE6.579e-1338.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ESCF36.579e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOSM6.579e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOL56.579e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO7I6.579e-1336.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCC6.579e-1334.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLO6.579e-1332.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLD6.579e-1332.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBPA8.593e-1334.785-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC06056G09T7 RindPdigS Citrus sinensis cDNA clone C06056G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922034 ID=FC922034; Name=FC922034; organism=Citrus sinensis; type=EST; length=431bp
CTTGCCAGCAGGGAATCCACTCTTGATCAATTCAAGGGTCTTGGTTCCAC
GAACCAAATCAAATCCATAAGCGGTGACACCCTTCAAAGAAGTGAGGGTC
TGGAATGCCTCAGCTGGAACATCAGCAAAGTAGGTCTCAACAAGAACATT
CAAGCCAGACAGAATTGACTCTAGCTCGGCATAAGCCTCACTGAATGCTT
GCAATTTGTGTGAGTCAAGATCCATAACAAGCAATGGCTCATCAAACTGA
ATCTAGGAAGCACCAGCAGCCTTAAGCTCAGAAATAACTTCCTTGTAGAT
TGTAAGGATTTTGGGAAGAAGAGAAAGAAGAGAAAAGGTCTTCGCAACAC
CCTTGGCAGGCTTAGACAGCAACAAGTATGACACAGGGCCAATAAGCACT
GGGACAGTTTCAACTCCAAGCCCCTTAGCCT
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