EY667929

Overview
NameEY667929
Unique NameEY667929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_BOMMO (Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 3.684e-44
Identity = 86/142 (60.56%), Postives = 102/142 (71.83%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV-SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFA 566
            +L  VK+ +     VAAQNCW    GAFTGEIS  M+ ++ + WVILGHSERR I  E +E V +KVA+AL  GLKVIAC+GETLE+RE+G T EVV  Q KA+   +   W NIVLAYEPVWAIGTGK ATP QAQ+VH A
Sbjct:   46 YLSYVKTIIPDNVEVAAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGLKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHA 187          

HSP 2 Score: 28.1054 bits (61), Expect = 3.684e-44
Identity = 16/33 (48.48%), Postives = 19/33 (57.58%), Query Frame = 2
Query:  578 WLLANPSPEIAAATRIFYGGIRKMGATGKELAA 676
            WL AN S  ++ A RI YGG     A  KELA+
Sbjct:  191 WLSANVSGSVSDAVRIQYGG-SVTAANAKELAS 222          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_LATCH (Triosephosphate isomerase OS=Latimeria chalumnae PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.064e-43
Identity = 78/139 (56.12%), Postives = 100/139 (71.94%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            +L   +  + P F VAAQNC+    GAFTGEIS  M+ +  + WVILGHSERR +  E +E +G KV++ALS+GL V+AC+GE L++REAG T  VV   T+ IAD V  WS +VLAYEPVWAIGTGK A+P Q+QE+H
Sbjct:   46 YLDFARLKVDPKFGVAAQNCYKVSKGAFTGEISPAMIKDCGVTWVILGHSERRHVFGESDELIGQKVSHALSEGLGVVACIGEKLDEREAGITEGVVFEVTEVIADDVKDWSKVVLAYEPVWAIGTGKTASPQQSQELH 184          

HSP 2 Score: 35.4242 bits (80), Expect = 3.064e-43
Identity = 22/45 (48.89%), Postives = 25/45 (55.56%), Query Frame = 2
Query:  575 KWLLANPSPEIAAATRIFYGGIRKMGATGKELAAPP*C*QQFVGG 709
            KWL  N S  +A + RI YGG    GAT KELA+ P      VGG
Sbjct:  189 KWLKENVSETVADSVRIIYGG-SVTGATCKELASEPDVDGFLVGG 232          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_BOVIN (Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE=2 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 4.094e-43
Identity = 95/191 (49.74%), Postives = 121/191 (63.35%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            ++   +  L P   VAAQNC+    GAFTGEIS  M+ +L   WV+LGHSERR +  E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV  QTK IAD V  WS +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L++ V   + Q      G    G   +      DVD   ++VGG
Sbjct:   48 YIDFARQKLDPKIAVAAQNCYKVANGAFTGEISPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKSNVSDAVAQSARIIYGGSVTGATCKELASQPDVDG--FLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.191e-42
Identity = 95/191 (49.74%), Postives = 120/191 (62.83%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            ++   +  L P   VAAQNC+    GAFTGEIS  M+ +    WV+LGHSERR +  E +E +G KVA+ALS+GL VIAC+GE L++REAG T +VV  QTK IAD V  WS +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L++ V   + Q      G    G   +      DVD   ++VGG
Sbjct:   47 YIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDG--FLVGG 233          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_MACMU (Triosephosphate isomerase OS=Macaca mulatta GN=TPI1 PE=3 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.556e-42
Identity = 94/191 (49.21%), Postives = 121/191 (63.35%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            ++   +  L P   VAAQNC+    GAFTGEIS  M+ +    WV+LGHSERR +  E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV  QTK IAD V  WS +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L++ V + + Q      G    G   +      DVD   ++VGG
Sbjct:   48 YIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKSNVSEAVAQSTRIIYGGSVTGATCKELASQPDVDG--FLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_MACFA (Triosephosphate isomerase OS=Macaca fascicularis GN=TPI1 PE=2 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 1.556e-42
Identity = 94/191 (49.21%), Postives = 121/191 (63.35%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            ++   +  L P   VAAQNC+    GAFTGEIS  M+ +    WV+LGHSERR +  E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV  QTK IAD V  WS +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L++ V + + Q      G    G   +      DVD   ++VGG
Sbjct:   48 YIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKSNVSEAVAQSTRIIYGGSVTGATCKELASQPDVDG--FLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.654e-42
Identity = 94/191 (49.21%), Postives = 120/191 (62.83%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            ++   +  L P   VAAQNC+    GAFTGEIS  M+ +    WV+LGHSERR +  E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV  QTK IAD V  WS +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L++ V   + Q      G    G   +      DVD   ++VGG
Sbjct:   48 YIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDYGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDG--FLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.654e-42
Identity = 94/191 (49.21%), Postives = 120/191 (62.83%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            ++   +  L P   VAAQNC+    GAFTGEIS  M+ +    WV+LGHSERR +  E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV  QTK IAD V  WS +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L++ V   + Q      G    G   +      DVD   ++VGG
Sbjct:   48 YIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDG--FLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_HUMAN (Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.654e-42
Identity = 94/191 (49.21%), Postives = 120/191 (62.83%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            ++   +  L P   VAAQNC+    GAFTGEIS  M+ +    WV+LGHSERR +  E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV  QTK IAD V  WS +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L++ V   + Q      G    G   +      DVD   ++VGG
Sbjct:   48 YIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDG--FLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_MOUSE (Triosephosphate isomerase OS=Mus musculus GN=Tpi1 PE=1 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 4.527e-42
Identity = 94/191 (49.21%), Postives = 121/191 (63.35%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            ++   +  L P   VAAQNC+    GAFTGEIS  M+ +L   WV+LGHSERR +  E +E +G KV++AL++GL VIAC+GE L++REAG T +VV  QTK IAD V  WS +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L++ V   + Q      G    G   +      DVD   ++VGG
Sbjct:   48 YIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVSHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKSNVNDGVAQSTRIIYGGSVTGATCKELASQPDVDG--FLVGG 234          
The following BLAST results are available for this feature:
BLAST of EY667929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_BOMMO3.684e-4460.56Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE... [more]
TPIS_LATCH3.064e-4356.12Triosephosphate isomerase OS=Latimeria chalumnae P... [more]
TPIS_BOVIN4.094e-4349.74Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE... [more]
TPIS_RABIT1.191e-4249.74Triosephosphate isomerase OS=Oryctolagus cuniculus... [more]
TPIS_MACMU1.556e-4249.21Triosephosphate isomerase OS=Macaca mulatta GN=TPI... [more]
TPIS_MACFA1.556e-4249.21Triosephosphate isomerase OS=Macaca fascicularis G... [more]
TPIS_PONAB2.654e-4249.21Triosephosphate isomerase OS=Pongo abelii GN=TPI1 ... [more]
TPIS_PANTR2.654e-4249.21Triosephosphate isomerase OS=Pan troglodytes GN=TP... [more]
TPIS_HUMAN2.654e-4249.21Triosephosphate isomerase OS=Homo sapiens GN=TPI1 ... [more]
TPIS_MOUSE4.527e-4249.21Triosephosphate isomerase OS=Mus musculus GN=Tpi1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-044-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY667929 ID=EY667929; Name=EY667929; organism=Citrus sinensis; type=EST; length=869bp
CGGAATTCCCTTCCCGACCCACGCGTCCGCCCACGCGTCTGACTGGAACA
ACTGAAGAAGTGAAAAAGATAGTGAGCGTACTCAATGAAGGTCAAGTTCC
ATCTTCTGATGTCGTTGAGGTCGTTGTTAGCCCTCCGTTTGTGTTTCTTG
GACTGGTGAAGAGTTCGTTGAGGCCTGGCTTTCATGTTGCGGCACAGAAT
TGCTGGGTCAAGAAGGGAGGTGCTTTCACCGGTGAGATTAGTGCGGAAAT
GCTCGTCAATTTGGAAATTCCTTGGGTCATTCTTGGTCATTCTGAAAGGA
GACTCATTTTGAATGAATTAAATGAGTTTGTTGGGGATAAGGTTGCATAT
GCACTTTCTCAAGGTTTGAAGGTGATTGCTTGTGTTGGTGAGACACTTGA
GCAGCGTGAAGCAGGATCTACTATGGAAGTTGTTGCTGCACAAACTAAAG
CAATCGCAGATCGAGTCTCAAGCTGGTCAAACATTGTTTTGGCCTATGAA
CCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCAGCGCAGGCTCA
AGAAGTACATTTTGCACCTGAGGAAAATGGCTTCTTGCAAACCCCAGTCC
TGAAATTGCTGCAGCAACACGGATCTTCTACGGAGGGATCCGTAAGATGG
GGGCAACTGGCAAGGAATTGGCTGCCCCCCCTTGATGTTGACAGCAGTTT
GTGGGTGGTGGGTGGTTTTGTTGAAAGCTGGACATGACTTGCCACACCCC
AGATCGGCGAGGCCTGGAAAAGAAGCGCCCGCAACCTGTTCGAAAGGAAG
GTAGGCAGAAAAAACAAAAAGAACGAAAGGGGCAGAAAGAAGAACCGATA
GCTGATGCCATAAAGGCTC
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