EY667929

Overview
NameEY667929
Unique NameEY667929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_CHICK (Triosephosphate isomerase OS=Gallus gallus GN=TPI1 PE=1 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 4.527e-42
Identity = 96/191 (50.26%), Postives = 121/191 (63.35%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            +L   +  L     VAAQNC+    GAFTGEIS  M+ ++   WVILGHSERR +  E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV  QTKAIAD V  WS +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L++ V   + Q      G    G   +      DVD   ++VGG
Sbjct:   47 YLDFARQKLDAKIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDG--FLVGG 233          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_RAT (Triosephosphate isomerase OS=Rattus norvegicus GN=Tpi1 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 5.912e-42
Identity = 96/191 (50.26%), Postives = 120/191 (62.83%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            ++   +  L P   VAAQNC+    GAFTGEIS  M+ +L   WV+LGHSERR I  E +E +G KV +ALS+GL VIAC+GE L++REAG T +VV  QTKAIAD V  W  +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L+  V + + Q      G    G   +      DVD   ++VGG
Sbjct:   48 YIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDLGATWVVLGHSERRHIFGESDELIGQKVNHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWCKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKCNVSEGVAQCTRIIYGGSVTGATCKELASQPDVDG--FLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_GORGO (Triosephosphate isomerase OS=Gorilla gorilla gorilla GN=TPI1 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.722e-42
Identity = 93/191 (48.69%), Postives = 119/191 (62.30%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            ++   +  L P   VAAQNC+    GAFTGEIS  M+ +    WV+LGHSERR +  E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV  QTK I D V  WS +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L++ V   + Q      G    G   +      DVD   ++VGG
Sbjct:   48 YIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVITDNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDG--FLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_PIG (Triosephosphate isomerase OS=Sus scrofa GN=TPI1 PE=2 SV=4)

HSP 1 Score: 169.859 bits (429), Expect = 1.720e-41
Identity = 90/183 (49.18%), Postives = 115/183 (62.84%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVD 692
            ++   +  L P   VAAQNC+    GAFTGEI   M+ +L   WV+LGHSERR +  E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV  QTK IAD V  W+ +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L+T V + +        G    G   +      DVD
Sbjct:   48 YIDFARQKLDPKIAVAAQNCYKVANGAFTGEIGPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWNKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKTHVPEAVAHSTRIIYGGSVTGATCKELASQPDVD 228          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_CANFA (Triosephosphate isomerase OS=Canis familiaris GN=TPI1 PE=1 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 2.247e-41
Identity = 93/191 (48.69%), Postives = 119/191 (62.30%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            ++   +  L     VAAQNC+    GAFTGEIS  M+ +    WV+LGHSERR +  E +E +G KVA+AL++GL VIAC+GE L++REAG T +VV  QTK IAD V  WS +VLAYEPVWAIGTGK ATP QAQEVH   +  G+L++ V   + Q      G    G   +      DVD   ++VGG
Sbjct:   48 YIDFARQKLDAKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVH--EKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDG--FLVGG 234          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_XENLA (Triosephosphate isomerase OS=Xenopus laevis GN=tpi1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.934e-41
Identity = 95/191 (49.74%), Postives = 120/191 (62.83%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            +L   +  L     ++AQNC+    GAFTGEIS  M+ +    WVILGHSERR +  E +E +G KVA+ALS+G+ VIAC+GE L+QREAG T +VV  QTKAIAD V  WS +VLAYEPVWAIGTGK ATP QAQEVH    E  +++T V + + Q      G    G   R      D+D   ++VGG
Sbjct:   47 YLDFARQKLDAKIALSAQNCYKVAKGAFTGEISPAMIKDCGATWVILGHSERRHVFGECDELIGQKVAHALSEGIGVIACIGEKLDQREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPEQAQEVHKKLRE--WVKTNVSEGVAQSVRIIYGGSVTGGTCRELAGQPDIDG--FLVGG 233          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_GRAVE (Triosephosphate isomerase, cytosolic (Fragment) OS=Gracilaria verrucosa GN=TPI1 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.759e-40
Identity = 80/173 (46.24%), Postives = 108/173 (62.43%), Query Frame = 3
Query:   57 EVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLI--LNELNEFVGDKVAYALSQG-LKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFA 566
            ++ ++VS  N                   +L   + +LR  F  +AQN W+ KGGAFTGE+ A M+ ++   WVILGHSERR I  L E +  +  K AYAL    L VI C+GE LE+RE+G T+ V   Q +A++D +S WS++V+AYEPVWAIGTGKVATP QA++VH A
Sbjct:   10 DIAELVSAFNAAPPIDAAHVQVVVAPPAVYLDSTRQALRADFDTSAQNAWISKGGAFTGELDAAMVKDVGAEWVILGHSERRHIAQLKESDHTIAMKAAYALQHASLGVIYCIGELLEERESGQTIAVCERQLQALSDAISDWSDVVIAYEPVWAIGTGKVATPEQAEQVHEA 182          

HSP 2 Score: 33.113 bits (74), Expect = 1.759e-40
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:  578 WLLANPSPEIAAATRIFYGG 637
            WL  N SP++AA+TRI YGG
Sbjct:  186 WLANNVSPQVAASTRILYGG 205          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_DROYA (Triosephosphate isomerase OS=Drosophila yakuba GN=Tpi PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.759e-40
Identity = 76/125 (60.80%), Postives = 92/125 (73.60%), Query Frame = 3
Query:  186 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            +A QN +    GAFTGEIS  ML ++   WVILGHSERR I  E +  + +K  +AL++GLKVIAC+GETLE+REAG T EVVA Q  A A ++  W N+V+AYEPVWAIGTGK ATP QAQEVH
Sbjct:   60 LAGQNAYKVAKGAFTGEISPAMLKDIGADWVILGHSERRAIFGESDALIAEKAEHALAEGLKVIACIGETLEEREAGKTNEVVARQMCAYAQKIKDWKNVVVAYEPVWAIGTGKTATPDQAQEVH 184          

HSP 2 Score: 31.187 bits (69), Expect = 1.759e-40
Identity = 20/45 (44.44%), Postives = 24/45 (53.33%), Query Frame = 2
Query:  575 KWLLANPSPEIAAATRIFYGGIRKMGATGKELAAPP*C*QQFVGG 709
            +WL  N S E++A+ RI YGG     A  KELA  P      VGG
Sbjct:  189 QWLSDNISKEVSASLRIQYGG-SVTAANAKELAKKPDIDGFLVGG 232          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_DROSI (Triosephosphate isomerase OS=Drosophila simulans GN=Tpi PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.759e-40
Identity = 76/125 (60.80%), Postives = 92/125 (73.60%), Query Frame = 3
Query:  186 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            +A QN +    GAFTGEIS  ML ++   WVILGHSERR I  E +  + +K  +AL++GLKVIAC+GETLE+REAG T EVVA Q  A A ++  W N+V+AYEPVWAIGTGK ATP QAQEVH
Sbjct:   60 LAGQNAYKVAKGAFTGEISPAMLKDIGADWVILGHSERRAIFGESDALIAEKAEHALAEGLKVIACIGETLEEREAGKTNEVVARQMCAYAQKIKDWKNVVVAYEPVWAIGTGKTATPDQAQEVH 184          

HSP 2 Score: 31.187 bits (69), Expect = 1.759e-40
Identity = 20/45 (44.44%), Postives = 24/45 (53.33%), Query Frame = 2
Query:  575 KWLLANPSPEIAAATRIFYGGIRKMGATGKELAAPP*C*QQFVGG 709
            +WL  N S E++A+ RI YGG     A  KELA  P      VGG
Sbjct:  189 QWLSDNISKEVSASLRIQYGG-SVTAANAKELAKKPDIDGFLVGG 232          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_SCHJA (Triosephosphate isomerase OS=Schistosoma japonicum GN=TPI PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.291e-40
Identity = 82/142 (57.75%), Postives = 103/142 (72.54%), Query Frame = 3
Query:  144 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS---WSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            +L  V+ SL    HVAAQNC+    GAFTGEIS  M+ ++   WVILGHSERR I NE +E V +KV +AL++GL V+AC+GETL +RE+G T EV   Q  AIA+++ S   W  +V+AYEPVWAIGTGKVA+P QAQEVH
Sbjct:   48 YLNEVRQSLAKEIHVAAQNCYKVPKGAFTGEISPSMIKDVGCDWVILGHSERRSIFNESDELVAEKVQHALAEGLSVVACIGETLSERESGKTEEVCVRQLNAIANKIKSIDEWKRVVVAYEPVWAIGTGKVASPGQAQEVH 189          

HSP 2 Score: 21.557 bits (44), Expect = 2.291e-40
Identity = 13/33 (39.39%), Postives = 14/33 (42.42%), Query Frame = 2
Query:  575 KWLLANPSPEIAAATRIFYGGIRKMGATGKELA 673
            KW   N    +    RI YGG     A  KELA
Sbjct:  194 KWFKTNTPSGVDQQIRIIYGG-SVTAANCKELA 225          
The following BLAST results are available for this feature:
BLAST of EY667929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_CHICK4.527e-4250.26Triosephosphate isomerase OS=Gallus gallus GN=TPI1... [more]
TPIS_RAT5.912e-4250.26Triosephosphate isomerase OS=Rattus norvegicus GN=... [more]
TPIS_GORGO7.722e-4248.69Triosephosphate isomerase OS=Gorilla gorilla goril... [more]
TPIS_PIG1.720e-4149.18Triosephosphate isomerase OS=Sus scrofa GN=TPI1 PE... [more]
TPIS_CANFA2.247e-4148.69Triosephosphate isomerase OS=Canis familiaris GN=T... [more]
TPIS_XENLA2.934e-4149.74Triosephosphate isomerase OS=Xenopus laevis GN=tpi... [more]
TPIS_GRAVE1.759e-4046.24Triosephosphate isomerase, cytosolic (Fragment) OS... [more]
TPIS_DROYA1.759e-4060.80Triosephosphate isomerase OS=Drosophila yakuba GN=... [more]
TPIS_DROSI1.759e-4060.80Triosephosphate isomerase OS=Drosophila simulans G... [more]
TPIS_SCHJA2.291e-4057.75Triosephosphate isomerase OS=Schistosoma japonicum... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-044-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY667929 ID=EY667929; Name=EY667929; organism=Citrus sinensis; type=EST; length=869bp
CGGAATTCCCTTCCCGACCCACGCGTCCGCCCACGCGTCTGACTGGAACA
ACTGAAGAAGTGAAAAAGATAGTGAGCGTACTCAATGAAGGTCAAGTTCC
ATCTTCTGATGTCGTTGAGGTCGTTGTTAGCCCTCCGTTTGTGTTTCTTG
GACTGGTGAAGAGTTCGTTGAGGCCTGGCTTTCATGTTGCGGCACAGAAT
TGCTGGGTCAAGAAGGGAGGTGCTTTCACCGGTGAGATTAGTGCGGAAAT
GCTCGTCAATTTGGAAATTCCTTGGGTCATTCTTGGTCATTCTGAAAGGA
GACTCATTTTGAATGAATTAAATGAGTTTGTTGGGGATAAGGTTGCATAT
GCACTTTCTCAAGGTTTGAAGGTGATTGCTTGTGTTGGTGAGACACTTGA
GCAGCGTGAAGCAGGATCTACTATGGAAGTTGTTGCTGCACAAACTAAAG
CAATCGCAGATCGAGTCTCAAGCTGGTCAAACATTGTTTTGGCCTATGAA
CCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCAGCGCAGGCTCA
AGAAGTACATTTTGCACCTGAGGAAAATGGCTTCTTGCAAACCCCAGTCC
TGAAATTGCTGCAGCAACACGGATCTTCTACGGAGGGATCCGTAAGATGG
GGGCAACTGGCAAGGAATTGGCTGCCCCCCCTTGATGTTGACAGCAGTTT
GTGGGTGGTGGGTGGTTTTGTTGAAAGCTGGACATGACTTGCCACACCCC
AGATCGGCGAGGCCTGGAAAAGAAGCGCCCGCAACCTGTTCGAAAGGAAG
GTAGGCAGAAAAAACAAAAAGAACGAAAGGGGCAGAAAGAAGAACCGATA
GCTGATGCCATAAAGGCTC
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