EY667929

Overview
NameEY667929
Unique NameEY667929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS1_RHIEC (Triosephosphate isomerase 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tpiA PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 9.813e-21
Identity = 51/125 (40.80%), Postives = 72/125 (57.60%), Query Frame = 3
Query:  186 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            + AQ+C  K  GA TG+ISAEM+ +    +VI+GHSERR    E +  V  K   A +  L  I C+GET ++R AG  ++V+  Q  A     ++  N V+AYEP+WAIGTG   T    ++ H
Sbjct:   65 IGAQDCHQKPSGAHTGDISAEMIADSFGTYVIVGHSERRTDHAETDHLVRAKAEAAFAAELTAIICIGETADERRAGQELDVIKRQLSASVPDAATAENTVIAYEPIWAIGTGVTPTSGDVEKAH 189          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_STRAW (Triosephosphate isomerase OS=Streptomyces avermitilis GN=tpiA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.282e-20
Identity = 73/177 (41.24%), Postives = 91/177 (51.41%), Query Frame = 3
Query:  192 AQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTEGSVRWGQLARNWLPPLDVDSSLWVVGG 716
            AQ+      GA+TGEIS  ML  L+  +V +GHSERR   +E +E V  KV  +   GL  I CVGE LE REAG+ +     Q +     V       IV+AYEPVWAIGTGKV     AQEV  A       +    +L  Q      GSV+ G +A     P D+D +L  VGG
Sbjct:   69 AQDVSAHDSGAYTGEISGSMLAKLKCTYVAVGHSERRQYHHETDEIVNAKVKASFRHGLIPILCVGEELEVREAGNHVTHTLTQVEGGLKDVPAEQAETIVIAYEPVWAIGTGKVCGADDAQEVCAAIRAK-LAELYSQELADQVRIQYGGSVKSGNVAEIMAKP-DIDGAL--VGG 241          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_PSYWF (Triosephosphate isomerase OS=Psychrobacter sp. (strain PRwf-1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.282e-20
Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 3
Query:  213 KGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS---------SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            + GA+TG++SA+ L ++ + WVI+GHSERR    E N  +  K+  +  QGL VI C+GE+    EAG T +V+  + + IAD +          +  N+++AYEPVWAIGTGKV +  Q  ++H
Sbjct:   78 ESGAYTGDVSAKQLKDMGVQWVIVGHSERRQYYKESNAVLLKKLLNSAEQGLGVILCIGESESDFEAGHTEQVLDEELQVIADFLQQLKPEQAGYAEQNLIIAYEPVWAIGTGKVPSVEQVTQIH 202          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_FRATT (Triosephosphate isomerase OS=Francisella tularensis subsp. tularensis GN=tpiA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.282e-20
Identity = 55/137 (40.15%), Postives = 81/137 (59.12%), Query Frame = 3
Query:  156 VKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            V S L     V  QN      GA+TGEISA ML ++   ++++GHSERR +  E +E V  K+   +   +  + C+GE+L+ R++G   +V+A Q   I + +S    + +V+AYEPVWAIGTG VA+  Q QE H
Sbjct:   49 VISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETH 185          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_FRATM (Triosephosphate isomerase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tpiA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.282e-20
Identity = 55/137 (40.15%), Postives = 81/137 (59.12%), Query Frame = 3
Query:  156 VKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            V S L     V  QN      GA+TGEISA ML ++   ++++GHSERR +  E +E V  K+   +   +  + C+GE+L+ R++G   +V+A Q   I + +S    + +V+AYEPVWAIGTG VA+  Q QE H
Sbjct:   49 VISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETH 185          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_FRAT1 (Triosephosphate isomerase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=tpiA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.282e-20
Identity = 55/137 (40.15%), Postives = 81/137 (59.12%), Query Frame = 3
Query:  156 VKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVH 560
            V S L     V  QN      GA+TGEISA ML ++   ++++GHSERR +  E +E V  K+   +   +  + C+GE+L+ R++G   +V+A Q   I + +S    + +V+AYEPVWAIGTG VA+  Q QE H
Sbjct:   49 VISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGESLDDRQSGKLKQVLATQLSLILENLSVEQLAKVVIAYEPVWAIGTGVVASLEQIQETH 185          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_DICTD (Triosephosphate isomerase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=tpiA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.282e-20
Identity = 58/126 (46.03%), Postives = 73/126 (57.94%), Query Frame = 3
Query:  186 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEV 557
            + AQN + +K GA+TGEIS  ML +L   +VI+GHSERR   +E N+ +  K+  A    L  I CVGE  E+RE G T EV+  Q K     +       IV+AYEPVWAIGTG  A    A EV
Sbjct:   61 LGAQNMFWEKEGAYTGEISPIMLKDLNCSYVIIGHSERRQYFSETNDMINKKLKSAFEYELIPIFCVGEKWEEREKGKTEEVITEQVKKGLQGLEKEKVEKIVIAYEPVWAIGTGHSAKGEDANEV 186          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_WOLSU (Triosephosphate isomerase OS=Wolinella succinogenes GN=tpiA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 55/132 (41.67%), Postives = 76/132 (57.58%), Query Frame = 3
Query:  177 GFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAG--STMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFA 566
            G  +  QN +    GAFTGE+ +E L  L I  +++GHSERR IL E   F  +K  Y  S G  +  C+GE+LE R AG  +T+    +Q + I     S+  +++AYEP+WAIGTG  A+  Q QE H A
Sbjct:   53 GVCIGTQNAYPAPSGAFTGEVGSEQLEELAIQTILIGHSERRGILGESQAFCAEKFRYYASLGYTIFYCIGESLEVRRAGIEATIRHNLSQLEGID---LSYPKLIIAYEPIWAIGTGVSASLEQIQETHAA 181          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_PROM0 (Triosephosphate isomerase OS=Prochlorococcus marinus (strain MIT 9301) GN=tpiA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 3
Query:  186 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEV 557
            +++QN   +  GAFT EIS +ML+   + + I+GHSE R   +E +E +  +  +A S GL  I CVGETLEQRE G    V+  Q +   +     SN+++AYEP+WAIGTGK      A ++
Sbjct:   62 ISSQNIHWEDQGAFTAEISPKMLLEHGVSYAIVGHSEPRKYFSESDEQINKRAVFAQSSGLTPIVCVGETLEQRERGEADRVITRQVEQGLENTDP-SNLIVAYEPIWAIGTGKTCEAEDANKI 184          
BLAST of EY667929 vs. ExPASy Swiss-Prot
Match: TPIS_GLUDA (Triosephosphate isomerase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=tpiA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 67/180 (37.22%), Postives = 103/180 (57.22%), Query Frame = 3
Query:  177 GFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTK-AIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFAPEENGFLQTPVLKLLQQHGSSTE----GSVRWGQLARNWLPPLDVDSSL 701
            G  + AQ+C     GA TG+ISA ML +L + +V+LGHSERR    EL+E V +K   AL+ GL  I C+GET +Q+ +G + + +  Q + ++ D  S     V+AYEPVWAIG+G    PA +Q++    +  GF++  +++     G +      GSV  G+ A + LP  +V  +L
Sbjct:   58 GIALGAQDCHQAASGAHTGDISAAMLADLGVEYVVLGHSERRRDHGELDETVREKTQTALAAGLTPIVCIGETGDQKASGESRDAIGWQIQGSLPDGFSG----VVAYEPVWAIGSG---NPAASQDI---ADMMGFIRAELVRQFGAAGKTIRILYGGSVN-GRDAASILPIAEVGGAL 226          
The following BLAST results are available for this feature:
BLAST of EY667929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS1_RHIEC9.813e-2140.80Triosephosphate isomerase 1 OS=Rhizobium etli (str... [more]
TPIS_STRAW1.282e-2041.24Triosephosphate isomerase OS=Streptomyces avermiti... [more]
TPIS_PSYWF1.282e-2040.80Triosephosphate isomerase OS=Psychrobacter sp. (st... [more]
TPIS_FRATT1.282e-2040.15Triosephosphate isomerase OS=Francisella tularensi... [more]
TPIS_FRATM1.282e-2040.15Triosephosphate isomerase OS=Francisella tularensi... [more]
TPIS_FRAT11.282e-2040.15Triosephosphate isomerase OS=Francisella tularensi... [more]
TPIS_DICTD1.282e-2046.03Triosephosphate isomerase OS=Dictyoglomus turgidum... [more]
TPIS_WOLSU1.674e-2041.67Triosephosphate isomerase OS=Wolinella succinogene... [more]
TPIS_PROM01.674e-2041.13Triosephosphate isomerase OS=Prochlorococcus marin... [more]
TPIS_GLUDA1.674e-2037.22Triosephosphate isomerase OS=Gluconacetobacter dia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-044-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY667929 ID=EY667929; Name=EY667929; organism=Citrus sinensis; type=EST; length=869bp
CGGAATTCCCTTCCCGACCCACGCGTCCGCCCACGCGTCTGACTGGAACA
ACTGAAGAAGTGAAAAAGATAGTGAGCGTACTCAATGAAGGTCAAGTTCC
ATCTTCTGATGTCGTTGAGGTCGTTGTTAGCCCTCCGTTTGTGTTTCTTG
GACTGGTGAAGAGTTCGTTGAGGCCTGGCTTTCATGTTGCGGCACAGAAT
TGCTGGGTCAAGAAGGGAGGTGCTTTCACCGGTGAGATTAGTGCGGAAAT
GCTCGTCAATTTGGAAATTCCTTGGGTCATTCTTGGTCATTCTGAAAGGA
GACTCATTTTGAATGAATTAAATGAGTTTGTTGGGGATAAGGTTGCATAT
GCACTTTCTCAAGGTTTGAAGGTGATTGCTTGTGTTGGTGAGACACTTGA
GCAGCGTGAAGCAGGATCTACTATGGAAGTTGTTGCTGCACAAACTAAAG
CAATCGCAGATCGAGTCTCAAGCTGGTCAAACATTGTTTTGGCCTATGAA
CCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCAGCGCAGGCTCA
AGAAGTACATTTTGCACCTGAGGAAAATGGCTTCTTGCAAACCCCAGTCC
TGAAATTGCTGCAGCAACACGGATCTTCTACGGAGGGATCCGTAAGATGG
GGGCAACTGGCAAGGAATTGGCTGCCCCCCCTTGATGTTGACAGCAGTTT
GTGGGTGGTGGGTGGTTTTGTTGAAAGCTGGACATGACTTGCCACACCCC
AGATCGGCGAGGCCTGGAAAAGAAGCGCCCGCAACCTGTTCGAAAGGAAG
GTAGGCAGAAAAAACAAAAAGAACGAAAGGGGCAGAAAGAAGAACCGATA
GCTGATGCCATAAAGGCTC
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