EY701063

Overview
NameEY701063
Unique NameEY701063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1056
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY701063 vs. ExPASy Swiss-Prot
Match: Y0701_DICDI (Probable serine/threonine-protein kinase DDB_G0272282 OS=Dictyostelium discoideum GN=DDB_G0272282 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.133e-14
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 2
Query:  104 VEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIE 316
            V HV  ERN+LA V +  +VKL+Y+FQ T+ LYL+MEYL GGD  +LL       E++A+ YIA++VL +E
Sbjct: 1569 VNHVIVERNILAMVQNEFVVKLFYAFQSTDKLYLVMEYLIGGDCASLLRALGCFEEHMAKHYIAETVLCLE 1639          

HSP 2 Score: 25.7942 bits (55), Expect = 3.133e-14
Identity = 8/21 (38.10%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  312 LSLSHQHSYMHRDIRPDDLLL 374
            L   H+ + +HRD++PD++L+
Sbjct: 1638 LEYLHKSAIVHRDLKPDNMLI 1658          
BLAST of EY701063 vs. ExPASy Swiss-Prot
Match: CTRO_HUMAN (Citron Rho-interacting kinase OS=Homo sapiens GN=CIT PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.135e-14
Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 2
Query:  104 VEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESI 322
            V     ERN+L+   S  I +L Y+FQD  +LYL+MEY PGGD+++LL R ED L EN+ +FY+A+ +LA+ S+
Sbjct:  139 VSFFEEERNILSRSTSPWIPQLQYAFQDKNHLYLVMEYQPGGDLLSLLNRYEDQLDENLIQFYLAELILAVHSV 212          

HSP 2 Score: 25.409 bits (54), Expect = 3.135e-14
Identity = 8/17 (47.06%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  324 HQHSYMHRDIRPDDLLL 374
            H   Y+HRDI+P+++L+
Sbjct:  213 HLMGYVHRDIKPENILV 229          
BLAST of EY701063 vs. ExPASy Swiss-Prot
Match: SID2_SCHPO (Serine/threonine-protein kinase sid2 OS=Schizosaccharomyces pombe GN=sid2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.548e-13
Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 2
Query:  104 VEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESI 322
            + HV  ER++L    S  +V+L Y+FQDT  +YL ME++PGGD  TLL     L ++ A+FY  +  LAI+++
Sbjct:  250 IRHVLTERDILTTANSEWLVRLLYAFQDTSNIYLAMEFVPGGDFRTLLSNSGVLRDHHAKFYATEMFLAIDAL 322          

HSP 2 Score: 28.4906 bits (62), Expect = 1.548e-13
Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  324 HQHSYMHRDIRPDDLLLG 377
            HQ  Y+HRD++P++ L+G
Sbjct:  323 HQLGYIHRDLKPENFLVG 340          
BLAST of EY701063 vs. ExPASy Swiss-Prot
Match: PPK35_SCHPO (Serine/threonine-protein kinase ppk35 OS=Schizosaccharomyces pombe GN=ppk35 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.026e-13
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 2
Query:  104 VEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIESI 322
            V+H+  ER++L    S  +VKLYY+FQD E +YL MEY+PGGD  T L  +  L EN  RFY+A+ V AI ++
Sbjct:  204 VKHILNERDILTNTNSEWLVKLYYAFQDKEKVYLAMEYVPGGDFRTFLTTKGLLHENQTRFYLAEMVAAISAV 276          
BLAST of EY701063 vs. ExPASy Swiss-Prot
Match: CBK1_EMENI (Serine/threonine-protein kinase cbk1 OS=Emericella nidulans GN=cbk1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.360e-13
Identity = 34/70 (48.57%), Postives = 52/70 (74.29%), Query Frame = 2
Query:  110 HVRAERN-LLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMREDTLTENVARFYIAQSVLAIE 316
            H+RAER+ L+A   S  +V L  SFQD ++LYL+M+Y+ GGD + LL+R + L E++AR+Y+A+ +L IE
Sbjct:  429 HLRAERDFLVASAKSRWVVPLIASFQDQKHLYLVMDYMVGGDFLGLLIRHNILRESIARWYVAEMILCIE 498          

HSP 2 Score: 23.483 bits (49), Expect = 7.360e-13
Identity = 7/18 (38.89%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  321 SHQHSYMHRDIRPDDLLL 374
            +H+   +HRD++PD+ L+
Sbjct:  500 AHRLRCIHRDVKPDNFLI 517          
BLAST of EY701063 vs. ExPASy Swiss-Prot
Match: MRCKG_MOUSE (Serine/threonine-protein kinase MRCK gamma OS=Mus musculus GN=Cdc42bpg PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.241e-12
Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = 2
Query:  116 RAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESI 322
            R ER++L +  S  +  L+Y+FQD EYLYL+M+Y  GGD++TLL R ED L   +A+FY+A+ VLAI S+
Sbjct:  117 REERDVLVKGDSRWVTALHYAFQDEEYLYLVMDYYAGGDLLTLLSRFEDRLPPELAQFYLAEMVLAIHSL 186          
BLAST of EY701063 vs. ExPASy Swiss-Prot
Match: MRCKG_HUMAN (Serine/threonine-protein kinase MRCK gamma OS=Homo sapiens GN=CDC42BPG PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.241e-12
Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = 2
Query:  116 RAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESI 322
            R ER++L +  S  +  L+Y+FQD EYLYL+M+Y  GGD++TLL R ED L   +A+FY+A+ VLAI S+
Sbjct:  117 REERDVLVKGDSRWVTTLHYAFQDEEYLYLVMDYYAGGDLLTLLSRFEDRLPPELAQFYLAEMVLAIHSL 186          
BLAST of EY701063 vs. ExPASy Swiss-Prot
Match: MRCKA_RAT (Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus GN=Cdc42bpa PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.897e-11
Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = 2
Query:  116 RAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESI 322
            R ER++L    S  I  L+Y+FQD   LYL+M+Y  GGD++TLL + ED L E +ARFY+A+ V+AI+S+
Sbjct:  123 REERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV 192          
BLAST of EY701063 vs. ExPASy Swiss-Prot
Match: MRCKA_MOUSE (Serine/threonine-protein kinase MRCK alpha OS=Mus musculus GN=Cdc42bpa PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.897e-11
Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = 2
Query:  116 RAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESI 322
            R ER++L    S  I  L+Y+FQD   LYL+M+Y  GGD++TLL + ED L E +ARFY+A+ V+AI+S+
Sbjct:  123 REERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV 192          
BLAST of EY701063 vs. ExPASy Swiss-Prot
Match: CTRO_MOUSE (Citron Rho-interacting kinase OS=Mus musculus GN=Cit PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 2.477e-11
Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 2
Query:  104 VEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLMR-EDTLTENVARFYIAQSVLAIESI 322
            V     ERN+L+   S  I +L Y+FQD   LYL+MEY PGGD ++LL R ED L E++ +FY+A+ +LA+ S+
Sbjct:  139 VSFFEEERNILSRSTSPWIPQLQYAFQDKNNLYLVMEYQPGGDFLSLLNRYEDQLDESMIQFYLAELILAVHSV 212          
The following BLAST results are available for this feature:
BLAST of EY701063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
Y0701_DICDI3.133e-1450.70Probable serine/threonine-protein kinase DDB_G0272... [more]
CTRO_HUMAN3.135e-1448.65Citron Rho-interacting kinase OS=Homo sapiens GN=C... [more]
SID2_SCHPO1.548e-1342.47Serine/threonine-protein kinase sid2 OS=Schizosacc... [more]
PPK35_SCHPO2.026e-1349.32Serine/threonine-protein kinase ppk35 OS=Schizosac... [more]
CBK1_EMENI7.360e-1348.57Serine/threonine-protein kinase cbk1 OS=Emericella... [more]
MRCKG_MOUSE2.241e-1251.43Serine/threonine-protein kinase MRCK gamma OS=Mus ... [more]
MRCKG_HUMAN2.241e-1251.43Serine/threonine-protein kinase MRCK gamma OS=Homo... [more]
MRCKA_RAT1.897e-1150.00Serine/threonine-protein kinase MRCK alpha OS=Ratt... [more]
MRCKA_MOUSE1.897e-1150.00Serine/threonine-protein kinase MRCK alpha OS=Mus ... [more]
CTRO_MOUSE2.477e-1147.30Citron Rho-interacting kinase OS=Mus musculus GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-102-F01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY701063 ID=EY701063; Name=EY701063; organism=Citrus sinensis; type=EST; length=1056bp
CCCGGAGTGGACTAACTGTTCACACATTATTACTGTAGTGTCATTTGCAT
TTGCAGTTTGTGCTGGTTTATTAGTGCGGATAAGATGCCTTTCTGCTTTG
TAGGTAGAACATGTAAGAGCTGAGAGGAACTTACTGGCTGAGGTTGCGAG
TCATTGCATAGTGAAGCTCTACTACTCATTCCAGGATACTGAGTACCTAT
ATTTGATTATGGAATACCTACCTGGTGGCGATATGATGACTTTGTTGATG
AGGGAGGACACCTTAACTGAAAACGTGGCTAGGTTTTACATTGCCCAAAG
TGTCCTGGCTATTGAGTCTATCCCACCAACATAGCTACATGCACAGAGAT
ATTAGACCTGACGACCTTCTTCTGGGACCAAAATGGTCATATGAAGGTTA
TCAGATGTTGGGCCTTTGCCAAGCCTCTTGGACTGGGTCAACCTTTATTT
GCAATCGCATGAGCATTAGAGCCGGTGGATGGATGAGAAAGTATGGGCGC
GCCCCGATGGGATCTTCGAGTGGGATGCCTTTTCCTTGACCACGGGGTGG
TGGAGGAGGTGGTGGGGGGAGAGGGGCCCCGGTGGAGCCGGCGTTTCCAC
GCGATGTGGGGGGGAGGTGGGCGGCGGGGGGGAGAAGGTCGGGCATTTTT
CTCCGGAGTGGGGTGGGGGAACACGATCGGAAGCCTGCGGTTCGCGCGCC
CGTGGGGCGGTGGTGGTGCTCGCGGCGAAGACGGGACCGCGCTGCCTCGG
GCCACGCGCGGCGCGGAGGGGGGTCCCGCGGCGGCGCGCCCCGGGCGTGC
TCCGGGCGGCCGGCCCCGGCGGCGCCCGCCGCCCCCCGCGGGTGGGCGGG
GGACGAGGGGCGGCCCCGGCGGGAGCCTGGTCTTTGTGTGTGAGTGTGGG
GGCGGGGGGGCAGAGGGCCGCGGGTCGTCGNNCCGGACGGGGGAGGGGAG
AGCCTCGGGGGCCGCCGGCCCCCGCCGCGCGGGGCCCACCGCGCGAGCGC
TTGGGAGTCGCGAAGGGAGTGAAAACGCGCGGTTGCCGCTCCGCGNATGG
CGCCAC
back to top