FC922022

Overview
NameFC922022
Unique NameFC922022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length350
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922022 vs. ExPASy Swiss-Prot
Match: AMPP1_STRCO (Xaa-Pro aminopeptidase 1 OS=Streptomyces coelicolor GN=pepPI PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.127e-13
Identity = 39/122 (31.97%), Postives = 65/122 (53.28%), Query Frame = 2
Query:    5 FYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMATRLGAVFMPHGLGHFLGIDTHD----------PGGYPKGTERSKEPGL 340
            +Y +D+T + P++G ++  Q  IY+AV  A  A I A++PG  + D H  +++++ E L + G++ G V+ ++   L   +  HG GH LG+D HD           G    G   + EPGL
Sbjct:  316 YYTADVTRTLPISGTYSELQKKIYDAVYDAQEAGIAAVRPGAKYRDFHDASQRVLAERLVEWGLVEGPVERVLELGLQRRWTLHGTGHMLGMDVHDCAAARVESYVDGTLEPGMVLTVEPGL 437          
BLAST of FC922022 vs. ExPASy Swiss-Prot
Match: XPP3_HUMAN (Probable Xaa-Pro aminopeptidase 3 OS=Homo sapiens GN=XPNPEP3 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.268e-12
Identity = 40/117 (34.19%), Postives = 64/117 (54.70%), Query Frame = 2
Query:    8 YGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMATRLGAVFMPHGLGHFLGIDTHDPGGYPK------GTERSKEPGL 340
            Y SDIT ++PVNG+FT+ Q+ +Y AVL+     +    PG    +++ +   +I + LK  G+M  N+ E  A +    + PH +GH+LG+D HD    P+      G   + EPG+
Sbjct:  339 YVSDITRTWPVNGRFTAPQAELYEAVLEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIM-KNIKENNAFKAARKYCPHHVGHYLGMDVHDTPDMPRSLPLQPGMVITIEPGI 454          
BLAST of FC922022 vs. ExPASy Swiss-Prot
Match: XPP3_PONAB (Probable Xaa-Pro aminopeptidase 3 OS=Pongo abelii GN=XPNPEP3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.880e-12
Identity = 39/117 (33.33%), Postives = 64/117 (54.70%), Query Frame = 2
Query:    8 YGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMATRLGAVFMPHGLGHFLGIDTHDPGGYPK------GTERSKEPGL 340
            Y SDIT ++PVNG+FT+ Q+ +Y A+L+     +    PG    +++ +   +I + LK  G+M  N+ E  A +    + PH +GH+LG+D HD    P+      G   + EPG+
Sbjct:  339 YVSDITRTWPVNGRFTAPQAELYEAILEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIM-KNIKENNAFKAARKYCPHHVGHYLGMDVHDTPDMPRSLPLQPGMVITIEPGI 454          
BLAST of FC922022 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEFN (Xaa-Pro dipeptidase OS=Shewanella frigidimarina (strain NCIMB 400) GN=pepQ PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.935e-11
Identity = 35/102 (34.31%), Postives = 56/102 (54.90%), Query Frame = 2
Query:    8 YGSDITCSFPVNGKFTSDQSLIYNAVL---KAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMATRLGAVFMPHGLGHFLGIDTHDPGGY 304
            Y +DIT ++      + +++  Y  ++   K   A+I  MKPGV +VD+H      I + L   G+  G  ++++A  + + F PHGLGH LG+  HD GGY
Sbjct:  252 YAADITRTY------SFEKNRFYELIVALDKVQLAIIEQMKPGVKYVDLHIATHHYIGQLLIDFGLANGTAEQLVAQGVTSAFFPHGLGHMLGLQVHDMGGY 347          
BLAST of FC922022 vs. ExPASy Swiss-Prot
Match: AMPP2_STRLI (Xaa-Pro aminopeptidase 2 OS=Streptomyces lividans GN=pepP2 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.935e-11
Identity = 33/95 (34.74%), Postives = 51/95 (53.68%), Query Frame = 2
Query:    8 YGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMATRLGAVFMPHGLGHFLGIDTHD 292
            Y +D+T + P++G FT  Q  +Y+AV +A  A I  +KPG  + D H+ A++ +   L + G + G  +      L   F   G GH LG+D HD
Sbjct:  296 YTADVTRTLPISGTFTPLQREVYDAVYEAQEAGIATVKPGAAYRDFHEAAQRHLAARLVEWGFIEGPAERAYELGLQRRFTMAGTGHMLGLDVHD 390          
BLAST of FC922022 vs. ExPASy Swiss-Prot
Match: AMPP2_STRCO (Xaa-Pro aminopeptidase 2 OS=Streptomyces coelicolor GN=pepP2 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.935e-11
Identity = 33/95 (34.74%), Postives = 51/95 (53.68%), Query Frame = 2
Query:    8 YGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMATRLGAVFMPHGLGHFLGIDTHD 292
            Y +D+T + P++G FT  Q  +Y+AV +A  A I  +KPG  + D H+ A++ +   L + G + G  +      L   F   G GH LG+D HD
Sbjct:  296 YTADVTRTLPISGTFTPLQREVYDAVYEAQEAGIATVKPGAAYRDFHEAAQRHLAARLVEWGFIEGPAERAYELGLQRRFTMAGTGHMLGLDVHD 390          
The following BLAST results are available for this feature:
BLAST of FC922022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
AMPP1_STRCO8.127e-1331.97Xaa-Pro aminopeptidase 1 OS=Streptomyces coelicolo... [more]
XPP3_HUMAN5.268e-1234.19Probable Xaa-Pro aminopeptidase 3 OS=Homo sapiens ... [more]
XPP3_PONAB6.880e-1233.33Probable Xaa-Pro aminopeptidase 3 OS=Pongo abelii ... [more]
PEPQ_SHEFN9.935e-1134.31Xaa-Pro dipeptidase OS=Shewanella frigidimarina (s... [more]
AMPP2_STRLI9.935e-1134.74Xaa-Pro aminopeptidase 2 OS=Streptomyces lividans ... [more]
AMPP2_STRCO9.935e-1134.74Xaa-Pro aminopeptidase 2 OS=Streptomyces coelicolo... [more]

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Properties
Property NameValue
Genbank descriptionC06056F09T7 RindPdigS Citrus sinensis cDNA clone C06056F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922022 ID=FC922022; Name=FC922022; organism=Citrus sinensis; type=EST; length=350bp
CCAATTTTACGGGTCTGACATTACTTGCTCATTCCCTGTAAATGGGAAGT
TTACTAGTGATCAGAGTCTTATATATAATGCCGTCCTCAAAGCTCACAAT
GCTGTCATAAATGCAATGAAACCTGGAGTGTGCTGGGTGGATATGCACAA
ATTGGCAGAGAAAATTATTCTGGAGTCGCTGAAGAAGGGTGGTGTCATGG
TTGGGAATGTGGATGAGATGATGGCTACACGATTGGGTGCTGTTTTCATG
CCTCATGGTCTTGGGCATTTCTTGGGTATTGACACTCATGATCCTGGCGG
CTACCCAAAGGGAACAGAAAGATCAAAAGAACCTGGCTTAAAATCTCTAC
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