FC922018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_SYNSC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9605) GN=ispG PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.682e-19 Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = -1 Query: 1 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 207 +A+RIG NHGSL++R++ YGD+P GMVESA+EF RIC +LDFHN L SMKAS VM+ AYRL+ M Sbjct: 162 KALRIGVNHGSLAERMLFTYGDTPEGMVESAMEFVRICHELDFHNILISMKASRAPVMLAAYRLMADTM 230
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_SYNPX (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain WH8102) GN=ispG PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18 Identity = 42/69 (60.87%), Postives = 55/69 (79.71%), Query Frame = -1 Query: 1 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 207 +A+RIG NHGSL++R++ YGD+P+GMVESA+EF RIC +LDFHN + SMKAS VM+ AYRL+ M Sbjct: 162 KALRIGVNHGSLAERMLFTYGDTPKGMVESAMEFVRICDELDFHNIVISMKASRAPVMLAAYRLMADTM 230
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_CYAA5 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=ispG PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18 Identity = 42/70 (60.00%), Postives = 55/70 (78.57%), Query Frame = -1 Query: 1 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 210 G+A+RIG NHGSL++R++ YGD+P GMVESA+EF RIC LDF+N + S+KAS VM+ AYRL+V M Sbjct: 168 GKAMRIGVNHGSLAERMLFTYGDTPEGMVESALEFIRICESLDFYNIVISLKASRVPVMLAAYRLMVKRM 237
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_BACV8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=ispG PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18 Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = -1 Query: 1 AVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 204 A+RIG NHGSLSDRIMS+YGD+P GMVES +EF RIC F++ + S+KASN VVMV+ RLLV EM Sbjct: 156 AIRIGVNHGSLSDRIMSHYGDTPEGMVESCMEFLRICVAEHFNDVVISIKASNTVVMVRTVRLLVKEM 223
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_ANAVT (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispG PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18 Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = -1 Query: 1 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 210 G+A+RIG NHGSL++R++ YGD+P GMVESA+EF RIC LDF N + SMKAS VMV AYRL+ M Sbjct: 172 GKAMRIGVNHGSLAERMLFTYGDTPEGMVESALEFIRICESLDFRNIVISMKASRVPVMVAAYRLMAKRM 241
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_ANASP (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=ispG PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18 Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = -1 Query: 1 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 210 G+A+RIG NHGSL++R++ YGD+P GMVESA+EF RIC LDF N + SMKAS VMV AYRL+ M Sbjct: 172 GKAMRIGVNHGSLAERMLFTYGDTPEGMVESALEFIRICESLDFRNIVISMKASRVPVMVAAYRLMAKRM 241
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_SYNS9 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9902) GN=ispG PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.653e-18 Identity = 42/69 (60.87%), Postives = 54/69 (78.26%), Query Frame = -1 Query: 1 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 207 +A+RIG NHGSL++R++ YGD+P+GMVESA+EF RIC LDFHN + SMKAS VM+ AYRL+ M Sbjct: 162 KALRIGVNHGSLAERMLFTYGDTPKGMVESAMEFVRICDDLDFHNIVISMKASRAPVMLSAYRLMADTM 230
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_SYNS3 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9311) GN=ispG PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.159e-18 Identity = 42/69 (60.87%), Postives = 54/69 (78.26%), Query Frame = -1 Query: 1 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 207 +A+RIG NHGSL++R++ YGD+P+GMVESA+EF RIC LDFHN + SMKAS VM+ AYRL+ M Sbjct: 162 KALRIGVNHGSLAERMLFTYGDTPQGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAAYRLMADTM 230
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_PARD8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ispG PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.159e-18 Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = -1 Query: 1 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 210 G A+RIG NHGSLSDRIMS YGD+P GMV S +EF RICR+ +F + + S+KASN VVMV+ RLLV M Sbjct: 154 GTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCMEFLRICREENFPDVVISIKASNTVVMVRTVRLLVRTM 223
BLAST of FC922018 vs. ExPASy Swiss-Prot
Match: ISPG_CYAP8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Cyanothece sp. (strain PCC 8801) GN=ispG PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.159e-18 Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = -1 Query: 1 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAVEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 210 G+A+RIG NHGSL++R++ YGD+P GMVESA+EF RIC LDF N + S+KAS VM+ AYRL+V M Sbjct: 170 GKAMRIGVNHGSLAERMLFTYGDTPEGMVESALEFIRICESLDFRNLVISLKASRVPVMLAAYRLMVKRM 239 The following BLAST results are available for this feature:
BLAST of FC922018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC922018 ID=FC922018; Name=FC922018; organism=Citrus sinensis; type=EST; length=210bpback to top |