FC922002

Overview
NameFC922002
Unique NameFC922002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length368
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.330e-35
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNPTNTVFDAKRLIGR+F DP
Sbjct:    4 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDP 79          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.330e-35
Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 362
            AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D
Sbjct:    6 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFND 80          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 5.655e-35
Identity = 68/77 (88.31%), Postives = 76/77 (98.70%), Query Frame = 3
Query:  135 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            PAIGIDLGTTYSCVG+++ DR+EIIANDQGNRTTPS+VAFTDTERLIGDAAKNQVAMNP+NTVFDAKRLIGR+F+DP
Sbjct:    3 PAIGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRKFADP 79          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.386e-35
Identity = 70/78 (89.74%), Postives = 74/78 (94.87%), Query Frame = 3
Query:  132 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            G ++GIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN  NTVFDAK LIGR+FSDP
Sbjct:    7 GYSVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNAHNTVFDAKPLIGRKFSDP 84          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 9.646e-35
Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 3
Query:  129 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 362
            + PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT T+FDAKRLIGR+F D
Sbjct:    3 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFDAKRLIGRKFDD 80          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 9.646e-35
Identity = 68/77 (88.31%), Postives = 74/77 (96.10%), Query Frame = 3
Query:  135 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            PA+GIDLGTTYSCVGV++ DR EIIANDQGNRTTPS+VAFTDTERL+GDAAKNQVAMNP NTVFDAKRLIGR+FSDP
Sbjct:    3 PAVGIDLGTTYSCVGVFREDRCEIIANDQGNRTTPSFVAFTDTERLVGDAAKNQVAMNPANTVFDAKRLIGRKFSDP 79          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.646e-35
Identity = 67/77 (87.01%), Postives = 75/77 (97.40%), Query Frame = 3
Query:  135 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            PA+GIDLGTTYSCVG+++ DR+EIIANDQGNRTTPS+VAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+DP
Sbjct:    3 PAVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPANTVFDAKRLIGRKFADP 79          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.260e-34
Identity = 74/84 (88.10%), Postives = 77/84 (91.67%), Query Frame = 3
Query:  117 AGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPS 368
            A KG G AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSY AFTDT RLIGD AKNQVAMNP+NTVFDAKRLIGRRF+ PS
Sbjct:    2 ASKG-GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYFAFTDTSRLIGD-AKNQVAMNPSNTVFDAKRLIGRRFNHPS 83          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.645e-34
Identity = 67/78 (85.90%), Postives = 74/78 (94.87%), Query Frame = 3
Query:  129 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 362
            + PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDT+RLIGDAAKNQVAMNP NT+FDAKRLIGR+F D
Sbjct:    3 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTDRLIGDAAKNQVAMNPNNTIFDAKRLIGRKFED 80          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 1.645e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81          
The following BLAST results are available for this feature:
BLAST of FC922002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_ANOAL4.330e-3592.11Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
HSP70_LEIAM4.330e-3593.33Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP72_PARBA5.655e-3588.31Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP70_BRELC7.386e-3589.74Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP7D_DROME9.646e-3587.18Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP70_NEUCR9.646e-3588.31Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP70_AJECA9.646e-3587.01Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP70_DAUCA1.260e-3488.10Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]
HSP7D_MANSE1.645e-3485.90Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP71_RAT1.645e-3490.79Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]

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Properties
Property NameValue
Genbank descriptionC06056D11T7 RindPdigS Citrus sinensis cDNA clone C06056D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922002 ID=FC922002; Name=FC922002; organism=Citrus sinensis; type=EST; length=368bp
CGCGGGGACGGAAACGGACTAACAATCAATAAGTAAACACTCAAGCTCGC
AAATCATCCGTGCTTTTTTTCTTTTTTTTTTTATTGTTGATAGATTCTTG
ATTTTGTTAATCGACGGCTGGAAAAGGCGAAGGTCCTGCTATTGGAATTG
ACTTGGGCACGACTTACTCTTGTGTCGGTGTCTGGCAACATGATCGAGTT
GAGATCATCGCTAATGATCAAGGTAACCGAACGACGCCGTCTTATGTGGC
GTTTACTGATACGGAGCGTTTGATCGGTGATGCTGCCAAGAACCAGGTCG
CCATGAACCCCACCAACACTGTTTTTGATGCTAAGCGTTTGATTGGGAGG
CGATTCAGTGATCCTTCA
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