FC922002

Overview
NameFC922002
Unique NameFC922002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length368
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.645e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 144.436 bits (363), Expect = 1.645e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.645e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.645e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.645e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.645e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.645e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 1.645e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 2.149e-34
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 3
Query:  135 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ DP
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDP 78          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 2.149e-34
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 3
Query:  135 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ DP
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDP 78          
The following BLAST results are available for this feature:
BLAST of FC922002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_PONAB1.645e-3490.79Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN1.645e-3490.79Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP71_CERAE1.645e-3490.79Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP71_CANFA1.645e-3490.79Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HS71B_PIG1.645e-3490.79Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]
HS71B_BOVIN1.645e-3490.79Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71B_BOSMU1.645e-3490.79Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HS71A_BOVIN1.645e-3490.79Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
HSP75_DROME2.149e-3488.31Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME2.149e-3488.31Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]

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Properties
Property NameValue
Genbank descriptionC06056D11T7 RindPdigS Citrus sinensis cDNA clone C06056D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922002 ID=FC922002; Name=FC922002; organism=Citrus sinensis; type=EST; length=368bp
CGCGGGGACGGAAACGGACTAACAATCAATAAGTAAACACTCAAGCTCGC
AAATCATCCGTGCTTTTTTTCTTTTTTTTTTTATTGTTGATAGATTCTTG
ATTTTGTTAATCGACGGCTGGAAAAGGCGAAGGTCCTGCTATTGGAATTG
ACTTGGGCACGACTTACTCTTGTGTCGGTGTCTGGCAACATGATCGAGTT
GAGATCATCGCTAATGATCAAGGTAACCGAACGACGCCGTCTTATGTGGC
GTTTACTGATACGGAGCGTTTGATCGGTGATGCTGCCAAGAACCAGGTCG
CCATGAACCCCACCAACACTGTTTTTGATGCTAAGCGTTTGATTGGGAGG
CGATTCAGTGATCCTTCA
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