EG358222

Overview
NameEG358222
Unique NameEG358222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP5 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.698e-23
Identity = 55/115 (47.83%), Postives = 73/115 (63.48%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLV 380
            + +VN+ST A+ + A CGA VAK             DVL ALGV ID+ P+ V RC+ EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   +VGV++   V
Sbjct:   87 SGSVNVSTCAAFIVAGCGAPVAKHGNRALSSRSGAADVLAALGVKIDITPDQVGRCIAEAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNMLGPLSNPAGVKRQMVGVFSRQWV 201          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_POLSQ (Anthranilate phosphoribosyltransferase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.698e-23
Identity = 56/119 (47.06%), Postives = 75/119 (63.03%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVPARA 392
            A+T NIST A  +AAA GAK+AK             DVLEALG  + L  E V +C+   G GFM +  +HPAMK V P+RK+L V+T+FNILGP+ NPA     ++GV++ +LV  +A
Sbjct:   90 AHTFNISTAAMFVAAAAGAKIAKHGNRSVSSKSGSADVLEALGANLALSAEQVAKCISTVGAGFMFAPNHHPAMKNVVPIRKQLGVRTIFNILGPLTNPADAKRILMGVFHADLVGIQA 208          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_BURM1 (Anthranilate phosphoribosyltransferase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.698e-23
Identity = 55/115 (47.83%), Postives = 75/115 (65.22%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLV 380
            ++T NIST +  + AA GAKVAK             DVLEALGV IDL P+ V   + E G+GFM +  +HPAMK +  VR++L V+T+FNILGP+ NPA  P  ++GV++ +LV
Sbjct:   90 SHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPDQVAASIAETGMGFMFAPNHHPAMKNIAAVRRELGVRTIFNILGPLTNPAGAPNQLMGVFHPDLV 204          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_THIDA (Anthranilate phosphoribosyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.218e-23
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLV 380
            A+T NIST A+ +AAA GA+VAK             DVLEALGV + L PE V   +D  GIGFM +  +H AM+   PVR++L V+T+FNILGP+ NPA  P  ++GV++ +LV
Sbjct:   89 AHTFNISTTAAFVAAAAGARVAKHGGRSVSSTSGSADVLEALGVNLALTPEQVAASIDAIGIGFMFAPNFHGAMRHAAPVRRELGVRTLFNILGPLTNPANAPHQLLGVFHADLV 203          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_PELPB (Anthranilate phosphoribosyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.218e-23
Identity = 53/115 (46.09%), Postives = 72/115 (62.61%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLV 380
            A T NIST ASI+A + G ++AK             DVLEALG  IDL PE  +    E+G  F+ +  YHP+MK V PVR++L ++T+FNILGP++NPA     +VGV+N  L+
Sbjct:   86 AGTFNISTTASIIANSAGVRIAKHGNRSVTSSCGSADVLEALGFTIDLPPEATKELFQESGFAFLFAPLYHPSMKRVAPVRRELGIRTIFNILGPLINPARAKRQLVGVFNRELM 200          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_GEOLS (Anthranilate phosphoribosyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.218e-23
Identity = 55/118 (46.61%), Postives = 71/118 (60.17%), Query Frame = 3
Query:   39 NTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVPARA 392
            NT NIST  S + +ACG KVAK             DVLE LGV +D+ PE V RC++E GIGF+ +   H AMK     R+++ ++T+FNILGP+ NPA     V+GVY E LV   A
Sbjct:  101 NTFNISTTVSFIVSACGVKVAKHGNRSVSSACGSADVLEKLGVNLDVTPEQVERCINEIGIGFLFAPALHGAMKHAIGPRREIGIRTIFNILGPLTNPANADCQVMGVYREELVAKMA 218          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_ALKMQ (Anthranilate phosphoribosyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=trpD PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.218e-23
Identity = 55/119 (46.22%), Postives = 73/119 (61.34%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVPARA 392
            ANT NIST  + +AAA G  V K             DVLE LGV IDL P+ V  CV++  +GFM + K+H AMK+    R++L V+T+FNILGP+ NPA V   V+GV++E+L    A
Sbjct:   86 ANTFNISTAVAFVAAAAGVTVVKHGNRSVSSQCGSADVLEKLGVNIDLTPKQVETCVEQVNMGFMFAPKFHQAMKYAAAARRELGVRTIFNILGPLTNPAKVKGQVLGVFDESLTEVMA 204          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPG_ECOLI (Anthranilate synthase component II OS=Escherichia coli (strain K12) GN=trpD PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 2.897e-23
Identity = 48/115 (41.74%), Postives = 76/115 (66.09%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLV 380
            +N++NIST ++ +AAACG KVAK             D+L A G+ +D++ +  R+ +DE G+ F+ + KYH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LV
Sbjct:  284 SNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELV 398          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_XANP2 (Anthranilate phosphoribosyltransferase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.897e-23
Identity = 54/115 (46.96%), Postives = 72/115 (62.61%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLV 380
            + + NIST AS + A  G  VAK             DVL ALGV IDLDP G+ RC+ EAGIGFM +  +HPAMK V P R ++  +T+FN+LGP+ NPA V   +VGV+ ++ +
Sbjct:   87 SGSYNISTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVRIDLDPAGISRCIAEAGIGFMFAPSHHPAMKHVGPTRVEMGTRTIFNLLGPLSNPAGVTRQMVGVFAKSWI 201          
BLAST of EG358222 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP2 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=trpD PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 4.941e-23
Identity = 54/115 (46.96%), Postives = 71/115 (61.74%), Query Frame = 3
Query:   36 ANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLV 380
            + +VN+ST  S + A CG  VAK             DVL ALGV ID+ P+ V RCV EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   ++GV++   V
Sbjct:   87 SGSVNVSTCTSFVVAGCGVPVAKHGNRALSSKSGAADVLNALGVKIDITPDHVGRCVAEAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMIGVFSRQWV 201          
The following BLAST results are available for this feature:
BLAST of EG358222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_RHOP51.698e-2347.83Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_POLSQ1.698e-2347.06Anthranilate phosphoribosyltransferase OS=Polynucl... [more]
TRPD_BURM11.698e-2347.83Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_THIDA2.218e-2348.70Anthranilate phosphoribosyltransferase OS=Thiobaci... [more]
TRPD_PELPB2.218e-2346.09Anthranilate phosphoribosyltransferase OS=Pelodict... [more]
TRPD_GEOLS2.218e-2346.61Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_ALKMQ2.218e-2346.22Anthranilate phosphoribosyltransferase OS=Alkaliph... [more]
TRPG_ECOLI2.897e-2341.74Anthranilate synthase component II OS=Escherichia ... [more]
TRPD_XANP22.897e-2346.96Anthranilate phosphoribosyltransferase OS=Xanthoba... [more]
TRPD_RHOP24.941e-2346.96Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]

Pages

back to top
Properties
Property NameValue
Genbank description4b10 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl004b10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358222 ID=EG358222; Name=EG358222; organism=Citrus sinensis; type=EST; length=400bp
AGCGTGGTCGCGGCCGAGGTACAGGAGGTGATGGTGCAAACACAGTGAAC
ATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGTGGTGCAAAAGTTGC
CAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGT
TAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGG
TGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACCC
TGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTG
TATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGCT
GTGGTTGGTGTTTACAATGAAAACTTGGTACCTGCCCGGGCGGCCGCTCG
back to top