CX047739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.406e-45 Identity = 91/210 (43.33%), Postives = 137/210 (65.24%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDI 695 YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DLT+++ +AL L ++ EK+TPN V+I Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.739e-43 Identity = 89/210 (42.38%), Postives = 135/210 (64.29%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDI 695 YDR + FSP+G L+QV+YA EA+K G TAIG+K+K VV+A EKR LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P L+ T+PSG + A AIG G A L++ Y +DL ++E +AL L ++ EK+TPN V+I Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKALSATLKPNEKLTPNTVEI 216
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.739e-43 Identity = 90/233 (38.63%), Postives = 141/233 (60.52%), Query Frame = 3 Query: 66 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP-TYHLYTPSEVEAVINRL 761 +E G+ TFSP GRL Q+EYA A G+TA+G+K +GVV+A EK+ TSPL + ++ K+ +D+H+GC SG+ D R LV+ AR Q +R +Y EPM + +Q + ++ F E + RPFG SLL+AG+D G LY DPSGTFW A +IG GS A + L+++Y ++ +++A AL LK+ + ++T N + RV + L T +++ ++++ Sbjct: 2 SESSYGLTTFSPSGRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALDDHVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPI---SQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIEDAVHTALLTLKEGFDGRMTAENTQVGRVVEGRFELLTVEQLKDYLDQI 231
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.271e-43 Identity = 95/239 (39.75%), Postives = 144/239 (60.25%), Query Frame = 3 Query: 63 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPS-LYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSIL----KQVMEEK-----VTPNNVDIARVAPTYHLYTPSEVEAV 749 +T YDR FSPEG L+QV YA EA+K G T++G+KT EGVV+A EKR PL++ ++KI +ID+HIG A +G+ D R L+++ARV T HR YGEP VE + + D+ + + RPFGV+L+ AG + +G + +Y TDP G ++ A AIGSG + A+ ++ Y D++L+EA +AL IL ++ +E+K P+ V++A + ++T E V Sbjct: 9 QTAYDRAATIFSPEGDLYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDIDDIDKIYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAY---TQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILYAIIRKTVEDKEKAIATLPDQVELAYITVKERMFTKMTKEQV 244
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.271e-43 Identity = 98/236 (41.53%), Postives = 147/236 (62.29%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE-KVTPNNVDIARVAPT------YHLYTPSEVEAVI 752 YD FSPEGRL+QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK+ +ID+H+ CA++G+++DA L+ ARV+ Q + F Y EPM VE Q+LCD + + RPFGVS L AG D+ +G LY +DPSG + A A+G+ ++ A S L++ Y D T +EA +AL +L + M+ +T +++A V T YH+++P + ++ Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKVLTKTMDSTSLTSEKLELAEVYLTPSKTVKYHVHSPESLTKLL 237
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSMA_HALSA (Proteasome subunit alpha OS=Halobacterium salinarium GN=psmA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.966e-43 Identity = 101/243 (41.56%), Postives = 150/243 (61.73%), Query Frame = 3 Query: 36 NQQQNMFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV---APTYHLYTPSEVEAVIN 755 NQQQ YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T EGVVL V+K+ SPLLE SSVEK+ +ID+H+G A +G +ADAR LV+ AR ++Q R Y EP+ V + T+++ D ++ + +RPFGV+LLIAG + P L+ TDPSGT + A AIGS L+++Y+ L++ + +AL L + E+ ++ + V + V TY E ++ I+ Sbjct: 5 NQQQ-------AYDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQY---TQVGGARPFGVALLIAGVEGGEPRLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNEGREDALSGDGVGVGIVDADTGTYRELAADESQSYID 237
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSMA_HALS3 (Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=psmA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.966e-43 Identity = 101/243 (41.56%), Postives = 150/243 (61.73%), Query Frame = 3 Query: 36 NQQQNMFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV---APTYHLYTPSEVEAVIN 755 NQQQ YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T EGVVL V+K+ SPLLE SSVEK+ +ID+H+G A +G +ADAR LV+ AR ++Q R Y EP+ V + T+++ D ++ + +RPFGV+LLIAG + P L+ TDPSGT + A AIGS L+++Y+ L++ + +AL L + E+ ++ + V + V TY E ++ I+ Sbjct: 5 NQQQ-------AYDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQY---TQVGGARPFGVALLIAGVEGGEPRLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNEGREDALSGDGVGVGIVDADTGTYRELAADESQSYID 237
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 3.874e-43 Identity = 94/226 (41.59%), Postives = 140/226 (61.95%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA--RVAPTYHLYTPSEVE 743 YDR + FSP+GRLFQVEYA EA+K GSTA+GLK GV+L +K+I S L+E +S+EKI ID+++ SGL+ADAR L++ AR+ Q + +YG + +E+ + + D ++ + RP+GVSL+ AG D+ GP L+ DP+GT + A AIGSG + S L+++Y + L+ +EA T+ + LK +EE +IA V Y +Y EV+ Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQY---TQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASLEEGEELKAPEIASITVGSKYRIYGAEEVK 230
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.060e-43 Identity = 88/230 (38.26%), Postives = 144/230 (62.61%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA--RVAPTYHLYTPSEVEAVIN 755 YDR + FSP+GRLFQVEYA EA+K GSTA+G+K K+GV L EK++ S L+E +S+EKI ID+ + SGL+ADAR L++ AR+ Q + +YG M +E+ + + D ++ + RP+GVS++ AG D GP L+ DP+GT + +IG+G + + L+++Y ++L+ EA + ++ LK + ++ + +IA ++ T+H++T EV +N Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGIKFKDGVALISEKKVRSRLVEKTSLEKIQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQY---TQYGGVRPYGVSIIFAGLDSIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKENLSEDEAIRMGIAALKSAVADESSMKEPEIASIKMGETFHVFTSEEVSKYLN 234
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 6.608e-43 Identity = 93/226 (41.15%), Postives = 139/226 (61.50%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA--RVAPTYHLYTPSEVE 743 YDR + FSP+GRLFQVEYA EA+K GSTA+G+K GV+L +K++ S L+E +S+EKI ID+++ SGL+ADAR LV+ AR+ Q + +YG + +E+ + + D ++ + RP+GVSL+ AG D+ GP L+ DP+GT + A AIGSG + S L+ +Y ++L +EA T+ + LK +EE +IA V Y +Y EV+ Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQY---TQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVK 230 The following BLAST results are available for this feature:
BLAST of CX047739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047739 ID=CX047739; Name=CX047739; organism=Citrus sinensis; type=EST; length=837bpback to top |