CX047739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.200e-38 Identity = 91/240 (37.92%), Postives = 140/240 (58.33%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA--RVAPTYHLYTPSEVEAVINRL*VSRENH 782 YDR + FSP+G LFQVEYA EA+K GSTA+G++ ++ VVL VEK+ + L + +V KI +D+++ A +GL ADAR ++ ARVE Q+HR + +P+TVE T+ + L R+ + + RPFG+S LI G D +G P LY TDPSGT+ A AIG G++ L++ Y + + TI L I + + N+++A R + + P E+E + + +E + Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGR---RPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKEKEEN 239
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSA7_CICAR (Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.873e-38 Identity = 92/231 (39.83%), Postives = 138/231 (59.74%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHL--YTPSEVEAVI 752 YDR + FSP+G LFQVEYA+EA++ G+ A+G++ + VVL VEK+ T+ L + SV KI+ +D+HI A +GL ADAR L+ ARVE Q+HR + +P+TVE T+ + L ++ + RPFG+S LI G D PSLY TDPSGTF A A G S L++ + K+ + QE +A+ L +V+E N+++A + L +E++A++ Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKLQDTRSVRKIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNF-KETSGQETVKLAIRALLEVVES--GGKNIEVAVMTKENGLRQLEEAEIDAIV 228
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSMA2_HALVO (Proteasome subunit alpha 2 OS=Halobacterium volcanii GN=psmA2 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.752e-38 Identity = 82/199 (41.21%), Postives = 123/199 (61.81%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE 668 YDRG + FSP+GR++QVEYA EA+K G+ +G++T +GVVLA + S L+E S+EK+ ++D+ +G A +G +ADAR LV+ AR Q YGEP+ VE+ T+ + D E + +RP+G SLLI G + L+ TDPSGT + A AIG E ++L++ Y +DL+L++ +A+ L EE Sbjct: 9 YDRGTSLFSPDGRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAATAGHVADARKLVDFARTTAQREHLRYGEPIGVETLTKTITD---NIQESTQSGGTRPYGASLLIGGVENGSGRLFATDPSGTPQEWKAVAIGGHREDVQAALEDGYAEDLSLEDGLALAVEALVAADEE 204
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSA7_RAT (Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.752e-38 Identity = 94/246 (38.21%), Postives = 142/246 (57.72%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCA------MSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA--RVAPTYHLYTPSEVEAVINRL*VSRENH 782 YDR + FSP+G LFQVEYA EA+K GSTA+G++ ++ VVL VEK+ + L + +V KI +D+++ A +SGL ADAR ++ ARVE Q+HR + G+P+TVE T+ + L R+ + + RPFG+S LI G D +G P LY TDPSGT+ A AIG G++ L++ Y D + TI L I + + N+++A R + +P E+E + + +E + Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAVVASVSGLTADARIVINRARVECQSHRLTVGDPVTVEYITRYIASLKQRYTQSNGR---RPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILSPEEIEKYVAEIEKEKEEN 245
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.901e-38 Identity = 83/210 (39.52%), Postives = 130/210 (61.90%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA 698 YDR + FSP+G LFQVEYA EA+K GSTA+G++ K+ +V+ VEK+ L + ++ KI ID+H+ A +GL ADAR LV+ AR+E Q+++ + +P+TV ++ + + RF + RPFG+S+LI G D +G P L+ T+PSG +++ A A G G + L+EQY+++ T+ EA T+ L + N++IA Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGR---RPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTLKLVVKSLAQVVPPGSQNIEIA 210
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.401e-38 Identity = 91/245 (37.14%), Postives = 142/245 (57.96%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSS--VEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAI-GSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVME-EKVTPNNVDIARVAP-----TYHLYTPSEVEAVINRL*VSRE 776 YD+ FSPEGR++QVEYA+ AI+ +G+ K+G+VLA EK+ T+ LL+ S+ EK+ +IDEH+ CA++G+ +DA L+ +AR+ +Q + Y EPM VE +CD + + RPFGVS L AG D + G LY +DPSG F A +I G S+ A S L+ Y D++L+EA +AL +L + M+ + ++ + YH++T +E++A I + +E Sbjct: 5 YDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDSSTSISEKMFKIDEHVVCAVAGITSDANILINYARLSSQRFFYQYQEPMPVEQLVSQICDTKQGY---TQYGGLRPFGVSFLYAGWDRHYGFQLYQSDPSGNFAGWKATSIGGENSQVAQSVLRSNYKPDISLKEALQLALKVLTKTMDRSNINSEKLEFSYFTKQGDNVVYHIFTAAELDAFIKETDLEQE 246
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.359e-38 Identity = 81/228 (35.53%), Postives = 137/228 (60.09%), Query Frame = 3 Query: 66 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA--PTYHLYTPSEVE 743 ++Y + TFSP G+L Q+E+A+ A+ G T++G+K GVV+A EK++ S L++ +SV+KI + +IG SG+ D R LV +R + + + Y EP+ V TQ + + A E + RPFGVSLL+AG D+ GP LY DPSG+++ A A+G A + L+++Y +D+ L +A A+ LK+ E +++ N++I ++ + + TP+E++ Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPV---TQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEIGKIGTDKVFRVLTPAEID 228
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.359e-38 Identity = 81/228 (35.53%), Postives = 137/228 (60.09%), Query Frame = 3 Query: 66 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA--PTYHLYTPSEVE 743 ++Y + TFSP G+L Q+E+A+ A+ G T++G+K GVV+A EK++ S L++ +SV+KI + +IG SG+ D R LV +R + + + Y EP+ V TQ + + A E + RPFGVSLL+AG D+ GP LY DPSG+++ A A+G A + L+++Y +D+ L +A A+ LK+ E +++ N++I ++ + + TP+E++ Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPV---TQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEIGKIGADKVFRVLTPAEID 228
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSA7B_ARATH (Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2 PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37 Identity = 92/235 (39.15%), Postives = 137/235 (58.30%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG--PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA---RVAPTYHLYTPSEVEAVINRL 761 YDR + FSP+G LFQVEYA+EA++ G+ A+G++ + VVLAVEK+ T L + S KI+ +D HI A +GL ADAR L+ AR+E Q+HR + +P+TVE T+ + L ++ + RPFG+S LI G D PSLY TDPSGTF A A G S L++ Y K+ + QE +A+ L +V+E N+++A R +E++A++ ++ Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNY-KESSGQETIKLAIRALLEVVES--GGKNIEVAVMTREETGLRQLEEAEIDAIVAKI 232
BLAST of CX047739 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 2.432e-37 Identity = 91/240 (37.92%), Postives = 138/240 (57.50%), Query Frame = 3 Query: 72 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA--RVAPTYHLYTPSEVEAVINRL*VSRENH 782 YDR + FSP+G LFQVEYA EAIK GSTA+G++ ++ VVL VEK+ + L + +V KI +D+++ A +GL ADAR ++ ARVE Q+HR + + +TVE T+ + L R+ + + RPFG+S LI G D +G P LY TDPSGT+ A AIG G++ L++ Y + + TI L I + + N+++A R + P E+E + + +E + Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAIKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGR---RPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIEEYVAEIEKEKEEN 239 The following BLAST results are available for this feature:
BLAST of CX047739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047739 ID=CX047739; Name=CX047739; organism=Citrus sinensis; type=EST; length=837bpback to top |