CX047731

Overview
NameCX047731
Unique NameCX047731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: 13SB_FAGES (13S globulin basic chain OS=Fagopyrum esculentum PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.194e-54
Identity = 93/170 (54.71%), Postives = 129/170 (75.88%), Query Frame = -2
Query:  204 GIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQE 713
            GI+E +CTMKL+ NI  P  AD YNP+ GR+TT N   LP LR +Q+SAE+G LY N + APHWN+NAHS +Y+TRGN ++Q+V + G  VFD ++++GQLI+VPQ FAV+K+A N+G E+++FKTND A  + L GR S  R +P +V+++SFQ+S +EA+ LKY RQE
Sbjct:    1 GIDENVCTMKLRENIKSPQEADFYNPKAGRITTANSQKLPALRSLQMSAERGFLYSNGIYAPHWNINAHSALYVTRGNAKVQVVGDEGNKVFDDEVKQGQLIIVPQYFAVIKKAGNQGFEYVAFKTNDNAMINPLVGRLSAFRAIPEEVLRSSFQISSEEAEELKYGRQE 170          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: CRU1_RAPSA (Cruciferin PGCRURSE5 OS=Raphanus sativus GN=CRURS PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.336e-54
Identity = 106/221 (47.96%), Postives = 149/221 (67.42%), Query Frame = -2
Query:  195 KLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXQGSG------DNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV 839
            +LQ  Q  +G IVRV+   +V+ P   +           G      DNG+EETIC+M+   NI+DP+ AD Y P  GRVT+VN + LPIL+YI+LSA +G L  NAM+ P +N+NA+ ++Y T+G  R+Q+V +NG+NV D Q+++GQL+V+PQGFA V ++     EWISFKTN  A  S LAGR S +R LPL+VI N+FQ+S +EA+R+K+N  E T+
Sbjct:  242 ELQNQQDNRGNIVRVKGPFQVVRPPLRQQYESEQWRHPRGPPQSPQDNGLEETICSMRTHENIDDPARADVYKPNLGRVTSVNSYTLPILQYIRLSATRGILQGNAMVLPKYNMNANEILYCTQGQARIQVVNDNGQNVLDQQVQKGQLVVIPQGFAYVVQSHGNNFEWISFKTNANAMVSTLAGRTSALRALPLEVITNAFQISLEEARRIKFNTPETTL 462          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: CRUA_BRANA (Cruciferin OS=Brassica napus GN=CRUA PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.089e-53
Identity = 103/223 (46.19%), Postives = 153/223 (68.61%), Query Frame = -2
Query:  174 KLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV-FTPGPRS 839
            +LQ  Q  +G I+RV+    V+ P                 NG+EETIC+ +   N++DPS AD Y P+ G ++T+N ++LPILR+++LSA +G++ QNAM+ P WN NA++V+Y+T G   +Q+V +NG+ VFDGQ+ +GQL+ +PQGF+VVKRA++    WI FKTN  A+ + LAGR SV+RGLPL+VI N +Q+S +EA+R+K+N  E T+  + GP S
Sbjct:  263 QLQNQQDNRGNIIRVQGPFSVIRPPLRSQRPQEEV------NGLEETICSARCTDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSEQFRWIEFKTNANAQINTLAGRTSVLRGLPLEVISNGYQISLEEARRVKFNTIETTLTHSSGPAS 479          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: CRU3_BRANA (Cruciferin CRU1 OS=Brassica napus GN=CRU1 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.089e-53
Identity = 106/221 (47.96%), Postives = 149/221 (67.42%), Query Frame = -2
Query:  195 KLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXQGSG------DNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV 839
            +LQ  Q  +G IVRV+   +V+ P   +           G      DNG+EETIC+M+   NI+DP+ AD Y P  GRVT+VN + LPIL+YI+LSA +G L  NAM+ P +N+NA+ ++Y T+G  R+Q+V +NG+NV D Q+++GQL+V+PQGFA V ++     EWISFKTN  A  S LAGR S +R LPL+VI N+FQ+S +EA+R+K+N  E T+
Sbjct:  272 ELQNQQDSRGNIVRVKGPFQVVRPPLRQPYESEQWRHPRGPPQSPQDNGLEETICSMRTHENIDDPARADVYKPNLGRVTSVNSYTLPILQYIRLSATRGILQGNAMVLPKYNMNANEILYCTQGQARIQVVNDNGQNVLDQQVQKGQLVVIPQGFAYVVQSHQNNFEWISFKTNANAMVSTLAGRTSALRALPLEVITNAFQISLEEARRIKFNTLETTL 492          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: CRU1_BRANA (Cruciferin BnC1 OS=Brassica napus GN=BnC1 PE=3 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.089e-53
Identity = 103/223 (46.19%), Postives = 153/223 (68.61%), Query Frame = -2
Query:  174 KLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV-FTPGPRS 839
            +LQ  Q  +G I+RV+    V+ P                 NG+EETIC+ +   N++DPS AD Y P+ G ++T+N ++LPILR+++LSA +G++ QNAM+ P WN NA++V+Y+T G   +Q+V +NG+ VFDGQ+ +GQL+ +PQGF+VVKRA++    WI FKTN  A+ + LAGR SV+RGLPL+VI N +Q+S +EA+R+K+N  E T+  + GP S
Sbjct:  264 QLQNQQDNRGNIIRVQGPFSVIRPPLRSQRPQETEV-----NGLEETICSARCTDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSEQFRWIEFKTNANAQINTLAGRTSVLRGLPLEVISNGYQISLEEARRVKFNTIETTLTHSSGPAS 481          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: 12S2_ARATH (12S seed storage protein CRB OS=Arabidopsis thaliana GN=CRB PE=1 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 9.217e-53
Identity = 103/222 (46.40%), Postives = 150/222 (67.57%), Query Frame = -2
Query:  174 KLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRS 839
            +LQ  Q  +G IV+V     V+ P   R        + +  NG+EET+CTM+   N++DPS AD Y P  G ++T+N +NLPILR ++LSA +G++ +NAM+ P WN+NA++ +Y+T G   +Q+V +NGE VFD +I  GQL+VVPQGF+V+K A     EWI FKTN+ A+ + LAGR SV+RGLPL+VI N +Q+S +EA+R+K++  E T+    P S
Sbjct:  230 QLQNQQDNRGNIVKVNGPFGVIRPPLRRGEGGQQPHEIA--NGLEETLCTMRCTENLDDPSDADVYKPSLGYISTLNSYNLPILRLLRLSALRGSIRKNAMVLPQWNVNANAALYVTNGKAHIQMVNDNGERVFDQEISSGQLLVVPQGFSVMKHAIGEQFEWIEFKTNENAQVNTLAGRTSVMRGLPLEVITNGYQISPEEAKRVKFSTIETTLTHSSPMS 449          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: 11S3_HELAN (11S globulin seed storage protein G3 OS=Helianthus annuus GN=HAG3 PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.204e-52
Identity = 102/233 (43.78%), Postives = 149/233 (63.95%), Query Frame = -2
Query:  186 KLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXQ---------------GSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 839
            KLQ    Q+G IV V ++L+++ P + R        Q               G   NG+EETIC+MK K NI++PS AD  NP+ G +  +N F  PIL +++LS E+G L  NA+ +PHW +NAH+++Y+T G  R+QIV   G +VFD ++REGQ++V+PQ FAV+KRA+ +G  W+SFKTND A  + LAGR S     PL +  N +Q+SR+EAQ+LK++++E  +F P
Sbjct:  249 KLQGQNDQRGHIVNVGQDLQIVRPPQDRRSPRQQQEQATSPRQQQEQQQGRRGGWSNGVEETICSMKFKVNIDNPSQADFVNPQAGSIANLNSFKFPILEHLRLSVERGELRPNAIQSPHWTINAHNLLYVTEGALRVQIVDNQGNSVFDNELREGQVVVIPQNFAVIKRANEQGSRWVSFKTNDNAMIANLAGRVSASAASPLTLWANRYQLSREEAQQLKFSQRETVLFAP 481          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: 13S2_FAGES (13S globulin seed storage protein 2 OS=Fagopyrum esculentum GN=FA18 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.682e-52
Identity = 100/226 (44.25%), Postives = 146/226 (64.60%), Query Frame = -2
Query:  186 SKLQRPQMQKGIIVRVEEELRVLSPQ-------RGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 842
            SKL+    Q+G IV+ ++ L++  PQ       R R             NG+E+  C +K + N N P+    +NPR GR+ TVN  +LPIL ++QLSA+   LY+NA++ P WNLNAHS +Y+TRG GR+Q+V + G++VFD +++ GQ++VVPQGFAVV +A   GLEW+  K +  A TS + GR SV+R +P++V+ NS+ +S  EA +LK  RQE+ VF P
Sbjct:  265 SKLRGENDQRGFIVQAQD-LKLRVPQDFEEEYERERGDRRRGQGGSGRSNGVEQGFCNLKFRRNFNTPTNTYVFNPRAGRINTVNSNSLPILEFLQLSAQHVVLYKNAIIGPRWNLNAHSALYVTRGEGRVQVVGDEGKSVFDDKVQRGQILVVPQGFAVVLKAGREGLEWVELKNSGNAITSPIGGRTSVLRAIPVEVLANSYDISTKEAYKLKNGRQEVEVFRP 489          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: GLUB1_ORYSJ (Glutelin type-B 1 OS=Oryza sativa subsp. japonica GN=GluB1-A PE=2 SV=3)

HSP 1 Score: 201.445 bits (511), Expect = 5.058e-51
Identity = 103/232 (44.40%), Postives = 152/232 (65.52%), Query Frame = -2
Query:  186 KLQRPQMQKGIIVRVEEELRVLSP-------------QRGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 839
            +LQ    Q+G I+ V+  L++L P             Q  +          S  NG+EE  CT+K++ NI +PS AD+YNPR GR+T+VN    PIL  IQ+SA + NLYQNA+++P WN+NAHS+VY+ +G  R+Q+V+  G+ VFDG +R GQL+++PQ +AV+K+A   G ++I+ KTN  A  S LAG+ SV R LP+DV+ N++++SR++A+ LK NR +E   FTP
Sbjct:  248 RLQSQNDQRGEIIHVKNGLQLLKPTLTQQQEQAQAQDQYQQVQYSERQQTSSRWNGLEENFCTIKVRVNIENPSRADSYNPRAGRITSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVNAHSLVYMIQGRSRVQVVSNFGKTVFDGVLRPGQLLIIPQHYAVLKKAEREGCQYIAIKTNANAFVSHLAGKNSVFRALPVDVVANAYRISREQARSLKNNRGEEHGAFTP 479          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: GLUB5_ORYSJ (Glutelin type-B 5 OS=Oryza sativa subsp. japonica GN=GLUB5 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.472e-50
Identity = 101/240 (42.08%), Postives = 155/240 (64.58%), Query Frame = -2
Query:  171 KLQRPQMQKGIIVRVEEELRVLSPQ----------------RGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTPGPRSQ 839
            +LQ    Q+G I+RV+  L++L P                 + +          +  NG++E  CT+K + NI +PS AD YNPR GR+T +N    PIL  +QLSA + NLYQNA+++P WN+NAHS+VYI +G+ R+Q+V+  G+ VF+G +R GQL+++PQ + V+K+A + G ++ISFKTN  +  S LAG+ S+ R +P+DVI N++++SR++A+ LK NR +EL  FTP  + Q
Sbjct:  246 RLQGQNDQRGEIIRVKNGLKLLRPAFAQQQEQAQQQEQAQAQYQVQYSEEQQPSTRCNGLDENFCTIKARLNIENPSHADTYNPRAGRITRLNSQKFPILNLVQLSATRVNLYQNAILSPFWNVNAHSLVYIVQGHARVQVVSNLGKTVFNGVLRPGQLLIIPQHYVVLKKAEHEGCQYISFKTNANSMVSHLAGKNSIFRAMPVDVIANAYRISREQARSLKNNRGEELGAFTPRYQQQ 485          
The following BLAST results are available for this feature:
BLAST of CX047731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
13SB_FAGES2.194e-5454.7113S globulin basic chain OS=Fagopyrum esculentum P... [more]
CRU1_RAPSA8.336e-5447.96Cruciferin PGCRURSE5 OS=Raphanus sativus GN=CRURS ... [more]
CRUA_BRANA1.089e-5346.19Cruciferin OS=Brassica napus GN=CRUA PE=1 SV=1[more]
CRU3_BRANA1.089e-5347.96Cruciferin CRU1 OS=Brassica napus GN=CRU1 PE=3 SV=... [more]
CRU1_BRANA1.089e-5346.19Cruciferin BnC1 OS=Brassica napus GN=BnC1 PE=3 SV=... [more]
12S2_ARATH9.217e-5346.4012S seed storage protein CRB OS=Arabidopsis thalia... [more]
11S3_HELAN1.204e-5243.7811S globulin seed storage protein G3 OS=Helianthus... [more]
13S2_FAGES2.682e-5244.2513S globulin seed storage protein 2 OS=Fagopyrum e... [more]
GLUB1_ORYSJ5.058e-5144.40Glutelin type-B 1 OS=Oryza sativa subsp. japonica ... [more]
GLUB5_ORYSJ1.472e-5042.08Glutelin type-B 5 OS=Oryza sativa subsp. japonica ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_16B11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-16B11-C21-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047731 ID=CX047731; Name=CX047731; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTTTTACGGCAAAAACATTTAGTTTTCTTATTTCACCA
GAACAAAACTTACAGCAGCAGTACACTTTCGAGCCAACAGCAAGGACTTT
ATTCCTTATGTACACACATATATAAACCCTTAATATAAGTTCATTACTTT
GATCACGCACTAACTAATTACTGTGACCTAGGCCCTGGAGTAAAGACAGT
CAGCTCCTGCCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACTT
GGAACGAGTTCTGGATAACGTCCAACGGCAGCCCTCTAATCACCGAAGCC
CTTCCGGCCAGCTGGCTTGTCTTGGCGACGTCGTTTGTCTTGAATGATAT
CCACTCCAATCCACGGTTGCTTGCCCTCTTCACCACGGCGAAGCCCTGCG
GGACAACGATCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTCC
CCGTTCTCCGCCACAATTTGCATCCTGCCGTTGCCCCTTGTTATGTAGAC
TACGCTGTGGGCATTCAAGTTCCAGTGTGGCGCCATCATGGCATTCTGGT
AGAGGTTCCCTTTCTCAGCACTAAGCTGAATGTATCGAAGGATAGGAAGG
TTGAATCTGTTGACGGTGGTGACGCGTCCGCCGCGGGGGTTGTACGCGTC
AGCACCCGATGGGTCATTGATGTTGTGCTTTAGCTTCATTGTACAGATAG
TTTCCTCGATGCCGTTGTCTCCGCTTCCTTGGAATTCTTGTTCTTGTTCT
TGTTCTCTGCCTCTTTGAGGTGACAGTACTCTCAGCTCTTCCTCGACTCT
GACAATAATCCCCTTCTGCATCTGTGGCCTCTGCAGTTTACTG
back to top