CX047731

Overview
NameCX047731
Unique NameCX047731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: GLUB4_ORYSJ (Glutelin type-B 4 OS=Oryza sativa subsp. japonica GN=GLUB4 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.472e-50
Identity = 101/240 (42.08%), Postives = 155/240 (64.58%), Query Frame = -2
Query:  171 KLQRPQMQKGIIVRVEEELRVLSPQ----------------RGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTPGPRSQ 839
            +LQ    Q+G I+RV+  L++L P                 + +          +  NG++E  CT+K + NI +PS AD YNPR GR+T +N    PIL  +QLSA + NLYQNA+++P WN+NAHS+VYI +G+ R+Q+V+  G+ VF+G +R GQL+++PQ + V+K+A + G ++ISFKTN  +  S LAG+ S+ R +P+DVI N++++SR++A+ LK NR +EL  FTP  + Q
Sbjct:  246 RLQGQNDQRGEIIRVKNGLKLLRPAFAQQQEQAQQQEQAQAQYQVQYSEEQQPSTRCNGLDENFCTIKARLNIENPSHADTYNPRAGRITRLNSQKFPILNLVQLSATRVNLYQNAILSPFWNVNAHSLVYIVQGHARVQVVSNLGKTVFNGVLRPGQLLIIPQHYVVLKKAEHEGCQYISFKTNANSMVSHLAGKNSIFRAMPVDVIANAYRISREQARSLKNNRGEELGAFTPRYQQQ 485          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: CRU2_BRANA (Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.922e-50
Identity = 101/223 (45.29%), Postives = 152/223 (68.16%), Query Frame = -2
Query:  174 KLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV-FTPGPRS 839
            +LQ  Q  +G IVRV+    V+ P            Q +  NG+EETIC+ +   N++DPS AD Y P+ G ++ +N ++LPILR ++LSA +G++ QNAM+ P W   +++V+Y+T G  ++Q+V +NG+ VFDGQ+ +GQL+ +PQGF+VVKRA++    WI FKTN  A+ + LAGR SV+RGLPL+VI N +Q+S +EA+R+K+N  E T+  + GP S
Sbjct:  270 QLQNQQDNRGNIVRVQGPFGVIRPP-----LKSQRPQETEANGLEETICSARCTDNLDDPSNADVYKPQLGYISILNSYDLPILRVLRLSALRGSIRQNAMVLPQWKSKSNAVLYVTDGEAQIQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSDQFRWIEFKTNANAQINTLAGRTSVMRGLPLEVIANGYQISLEEARRVKFNTIETTLTHSSGPAS 487          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: GLUB2_ORYSJ (Glutelin type-B 2 OS=Oryza sativa subsp. japonica GN=GLUB2 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.510e-50
Identity = 102/230 (44.35%), Postives = 150/230 (65.22%), Query Frame = -2
Query:  186 KLQRPQMQKGIIVRVEEELRVLSP-----------QRGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 839
            +LQ    Q+G IV V+  L++L P           Q             S  NG+EE  CT+K + NI +PS AD+YNPR GR+++VN    PIL  IQ+SA + NLYQNA+++P WN+NAHS+VY+ +G  R+Q+V+  G+ VFDG +R GQL+++PQ +AV+K+A   G ++I+ KTN  A  S LAG+ SV R LP+DV+ N++++SR++A+ +K NR +E   FTP
Sbjct:  246 RLQSQNDQRGEIVHVKNGLQLLKPTLTQQQEQAQAQYQEVQYSEQQQTSSRWNGLEENFCTIKARVNIENPSRADSYNPRAGRISSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVNAHSLVYMIQGQSRVQVVSNFGKTVFDGVLRPGQLLIIPQHYAVLKKAEREGCQYIAIKTNANAFVSHLAGKNSVFRALPVDVVANAYRISREQARSIKNNRGEEHGAFTP 475          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: SSG2_AVESA (12S seed storage globulin 2 OS=Avena sativa PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.182e-49
Identity = 85/178 (47.75%), Postives = 131/178 (73.60%), Query Frame = -2
Query:  186 NGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 716
            NG+EE  C+++ + NI +P  AD YNPR GR+T +N  N P L  +Q+SA + NLYQNA+++P+WN+NAHSV+++ +G  R+Q+V  +G+ VF+  +R GQL+++PQ + V+K+A   G ++ISFKTN  +  SQ+AG+ S++R LP+DV+ N++++SR EAQ LK NR +E   FTP
Sbjct:  317 NGLEENFCSLEARQNIENPKRADTYNPRAGRITHLNSKNFPTLNLVQMSATRVNLYQNAILSPYWNINAHSVMHMIQGRARVQVVNNHGQTVFNDILRRGQLLIIPQHYVVLKKAEREGCQYISFKTNPNSMVSQIAGKTSILRALPVDVLANAYRISRQEAQNLKNNRGEEFDAFTP 494          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: SSG1_AVESA (12S seed storage globulin 1 OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.431e-47
Identity = 82/178 (46.07%), Postives = 129/178 (72.47%), Query Frame = -2
Query:  186 NGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 716
            NG+EE  C+++ + NI +P  AD YNPR GR+T +N  N P L  +Q+SA + NLYQNA+++P+WN+NAHSV+++ +G  R+Q+V  +G+ VF+  +R GQL+++PQ + V+K+A   G ++ISFKT   +  S +AG+ S++R LP+DV+ N++++SR E+Q LK NR +E   FTP
Sbjct:  317 NGLEENFCSLEARQNIENPKRADTYNPRAGRITHLNSKNFPTLNLVQMSATRVNLYQNAILSPYWNINAHSVMHMIQGRARVQVVNNHGQTVFNDILRRGQLLIIPQHYVVLKKAEREGCQYISFKTTPNSMVSYIAGKTSILRALPVDVLANAYRISRQESQNLKNNRGEEFGAFTP 494          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: 11S2_SESIN (11S globulin seed storage protein 2 OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.787e-47
Identity = 94/230 (40.87%), Postives = 142/230 (61.74%), Query Frame = -2
Query:  177 KLQRPQMQKGIIVRVEEELRVLSPQ--------RGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTPGPR 839
            ++Q  + ++G+IV   E +  + P         RGR            DNG+EET CTMK + N+     AD ++ + GRV  V+R  LPIL+Y+ LSAEKGNLY NA+++P W++  H++VY+TRG+ ++Q+V  NG+ + + ++ +G++ VVPQ +    RA N G EW++FKT      S LAG  SVIR +PL VI NS+Q+S ++AQ LK NR  +  + +PG R
Sbjct:  238 RMQSEEEERGLIVMARERMTFVRPDEEEGEQEHRGRQL----------DNGLEETFCTMKFRTNVESRREADIFSRQAGRVHVVDRNKLPILKYMDLSAEKGNLYSNALVSPDWSMTGHTIVYVTRGDAQVQVVDHNGQALMNDRVNQGEMFVVPQYYTSTARAGNNGFEWVAFKTTGSPMRSPLAGYTSVIRAMPLQVITNSYQISPNQAQALKMNRGSQSFLLSPGGR 457          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: LEGB7_VICFA (Legumin type B (Fragment) OS=Vicia faba GN=LEB7 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.091e-45
Identity = 96/228 (42.11%), Postives = 141/228 (61.84%), Query Frame = -2
Query:  171 KLQRPQMQKGIIVRVEEELRVLSPQ----RGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 839
            +L+ P+ ++  IVRVE  LR+++P+                  G NG+EETIC++K++ NI  P+ AD YNPR G ++T N   LPILRY++LSAE   LY+N + APHWN+NA+S++Y+ RG GR++IV   G  VFD ++R+GQL+VVPQ F V ++A    GLE++ FKTND A  S +     V R  P DV+ N+F + + +   LK +     +  P  +SQ
Sbjct:  109 RLRSPRDKRNQIVRVEGGLRIINPEGQQEEEEQEEEEKQRSEQGRNGLEETICSLKIRENIAQPARADLYNPRAGSISTANSLTLPILRYLRLSAEYVRLYRNGIYAPHWNINANSLLYVIRGEGRVRIVNSQGNAVFDNKVRKGQLVVVPQNFVVAEQAGEEEGLEYLVFKTNDRAAVSHV---QQVFRATPADVLANAFGLRQRQVTELKLSGNRGPLVHPHSQSQ 333          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: LEGB6_VICFA (Legumin type B (Fragment) OS=Vicia faba GN=LEB6 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.091e-45
Identity = 96/228 (42.11%), Postives = 141/228 (61.84%), Query Frame = -2
Query:  171 KLQRPQMQKGIIVRVEEELRVLSPQ----RGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 839
            +L+ P+ ++  IVRVE  LR+++P+                  G NG+EETIC++K++ NI  P+ AD YNPR G ++T N   LPILRY++LSAE   LY+N + APHWN+NA+S++Y+ RG GR++IV   G  VFD ++R+GQL+VVPQ F V ++A    GLE++ FKTND A  S +     V R  P DV+ N+F + + +   LK +     +  P  +SQ
Sbjct:  103 RLRSPRDKRNQIVRVEGGLRIINPEGQQEEEEEEEEEKQRSEQGRNGLEETICSLKIRENIAQPARADLYNPRAGSISTANSLTLPILRYLRLSAEYVRLYRNGIYAPHWNINANSLLYVIRGEGRVRIVNSQGNAVFDNKVRKGQLVVVPQNFVVAEQAGEEEGLEYLVFKTNDRAAVSHV---QQVFRATPADVLANAFGLRQRQVTELKLSGNRGPLVHPQSQSQ 327          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: LEGB2_VICFA (Legumin type B (Fragment) OS=Vicia faba GN=LEB2 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.091e-45
Identity = 96/228 (42.11%), Postives = 141/228 (61.84%), Query Frame = -2
Query:  171 KLQRPQMQKGIIVRVEEELRVLSPQ----RGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 839
            +L+ P+ ++  IVRVE  LR+++P+                  G NG+EETIC++K++ NI  P+ AD YNPR G ++T N   LPILRY++LSAE   LY+N + APHWN+NA+S++Y+ RG GR++IV   G  VFD ++R+GQL+VVPQ F V ++A    GLE++ FKTND A  S +     V R  P DV+ N+F + + +   LK +     +  P  +SQ
Sbjct:  109 RLRSPRDKRNQIVRVEGGLRIINPEGQQEEEEEEEEEKQRSEQGRNGLEETICSLKIRENIAQPARADLYNPRAGSISTANSLTLPILRYLRLSAEYVRLYRNGIYAPHWNINANSLLYVIRGEGRVRIVNSQGNAVFDNKVRKGQLVVVPQNFVVAEQAGEEEGLEYLVFKTNDRAAVSHV---QQVFRATPADVLANAFGLRQRQVTELKLSGNRGPLVHPQSQSQ 333          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: LEGA_PEA (Legumin A OS=Pisum sativum GN=LEGA PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.431e-45
Identity = 83/170 (48.82%), Postives = 122/170 (71.76%), Query Frame = -2
Query:  213 GDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYN 722
            GDNG+EET+CT KL+ NI   S  D YNP  GR+ TV   +LP+LR+++LSAE G+L++NAM  PH+NLNA+S++Y  +G  R+Q+V  NG  VFDG++  G+ + VPQ +AV  ++ +    +++FKTND A  ++LAG +SVI  LPLDV+  +F + R+EA++LK N
Sbjct:  330 GDNGLEETVCTAKLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSLSDRFSYVAFKTNDRAGIARLAGTSSVINNLPLDVVAATFNLQRNEARQLKSN 499          
The following BLAST results are available for this feature:
BLAST of CX047731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
GLUB4_ORYSJ1.472e-5042.08Glutelin type-B 4 OS=Oryza sativa subsp. japonica ... [more]
CRU2_BRANA1.922e-5045.29Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3 SV=... [more]
GLUB2_ORYSJ2.510e-5044.35Glutelin type-B 2 OS=Oryza sativa subsp. japonica ... [more]
SSG2_AVESA6.182e-4947.7512S seed storage globulin 2 OS=Avena sativa PE=3 S... [more]
SSG1_AVESA4.431e-4746.0712S seed storage globulin 1 OS=Avena sativa PE=2 S... [more]
11S2_SESIN5.787e-4740.8711S globulin seed storage protein 2 OS=Sesamum ind... [more]
LEGB7_VICFA1.091e-4542.11Legumin type B (Fragment) OS=Vicia faba GN=LEB7 PE... [more]
LEGB6_VICFA1.091e-4542.11Legumin type B (Fragment) OS=Vicia faba GN=LEB6 PE... [more]
LEGB2_VICFA1.091e-4542.11Legumin type B (Fragment) OS=Vicia faba GN=LEB2 PE... [more]
LEGA_PEA2.431e-4548.82Legumin A OS=Pisum sativum GN=LEGA PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_16B11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-16B11-C21-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047731 ID=CX047731; Name=CX047731; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTTTTACGGCAAAAACATTTAGTTTTCTTATTTCACCA
GAACAAAACTTACAGCAGCAGTACACTTTCGAGCCAACAGCAAGGACTTT
ATTCCTTATGTACACACATATATAAACCCTTAATATAAGTTCATTACTTT
GATCACGCACTAACTAATTACTGTGACCTAGGCCCTGGAGTAAAGACAGT
CAGCTCCTGCCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACTT
GGAACGAGTTCTGGATAACGTCCAACGGCAGCCCTCTAATCACCGAAGCC
CTTCCGGCCAGCTGGCTTGTCTTGGCGACGTCGTTTGTCTTGAATGATAT
CCACTCCAATCCACGGTTGCTTGCCCTCTTCACCACGGCGAAGCCCTGCG
GGACAACGATCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTCC
CCGTTCTCCGCCACAATTTGCATCCTGCCGTTGCCCCTTGTTATGTAGAC
TACGCTGTGGGCATTCAAGTTCCAGTGTGGCGCCATCATGGCATTCTGGT
AGAGGTTCCCTTTCTCAGCACTAAGCTGAATGTATCGAAGGATAGGAAGG
TTGAATCTGTTGACGGTGGTGACGCGTCCGCCGCGGGGGTTGTACGCGTC
AGCACCCGATGGGTCATTGATGTTGTGCTTTAGCTTCATTGTACAGATAG
TTTCCTCGATGCCGTTGTCTCCGCTTCCTTGGAATTCTTGTTCTTGTTCT
TGTTCTCTGCCTCTTTGAGGTGACAGTACTCTCAGCTCTTCCTCGACTCT
GACAATAATCCCCTTCTGCATCTGTGGCCTCTGCAGTTTACTG
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