CX047715

Overview
NameCX047715
Unique NameCX047715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX047715 vs. ExPASy Swiss-Prot
Match: GLYG2_SOYBN (Glycinin G2 OS=Glycine max GN=Gy2 PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 6.189e-39
Identity = 80/182 (43.96%), Postives = 117/182 (64.29%), Query Frame = -1 
Query:  212 NGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 757
            NG +ETICTM+LR NI + S  D+YNP+AG +TT    + P L  L+LSA+ G+L  NA+  P + LNA+SI+Y   G   +Q+V  NGE VFDG+++EG +++VPQ FAV  ++ +   E++SFKTND      LAG  S+L  LP +VIQ++F +   +A+++K N    +   P   SQ
Sbjct:  300 NGIDETICTMRLRQNIGQNSSPDIYNPQAGSITTATSLDFPALWLLKLSAQYGSLRKNAMFVPHYTLNANSIIYALNGRALVQVVNCNGERVFDGELQEGGVLIVPQNFAVAAKSQSDNFEYVSFKTNDRPSIGNLAGANSLLNALPEEVIQHTFNLKSQQARQVK-NNNPFSFLVPPQESQ 480
[Close]
BLAST of CX047715 vs. ExPASy Swiss-Prot
Match: LEG_CICAR (Legumin OS=Cicer arietinum GN=leg3 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.637e-31
Identity = 64/136 (47.06%), Postives = 93/136 (68.38%), Query Frame = -1 
Query:  362 ERDNGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAE-NGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAM 766
            +RDNGFEETICT +L  NI   S  D+YNP+AGR+ TV  F+L  LR L+LSAE G+L+ NA+  P +NLNA+SI+Y  +G  R+       G +VFDG++  G+ ++VPQ FA+  ++ +    +++FKTND A+
Sbjct:  308 QRDNGFEETICTARLHQNIGSSSSPDIYNPQAGRIKTVTSFDLQALRFLKLSAEFGSLHKNAMFVPHYNLNANSILYALKGRARLLYALNCKGNSVFDGELEAGRALIVPQNFAIAAKSLSDRFSYVAFKTNDRAL 443
The following BLAST results are available for this feature:
BLAST of CX047715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
GLYG2_SOYBN6.189e-3943.96Glycinin G2 OS=Glycine max GN=Gy2 PE=1 SV=2[more]
LEG_CICAR3.637e-3147.06Legumin OS=Cicer arietinum GN=leg3 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_16A12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-16A12-A23-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047715 ID=CX047715; Name=CX047715; organism=Citrus sinensis; type=EST; length=874bp
TTTTTTTTTTTGAACAAAGAAATATTACTTTTTATTTTACTCGCACATTA
AACTTACATACAGTCCCGCAGCATTCATGTCGTTCATGCCCATTAAGGCT
TTTATTCATACATAGTCGTCCCTACCTCAACTACTTACACTACACTACAT
AGCTTACTTCCTGATTACGTACCCATTTACATAATTTCTCTTAGGCTACG
GTTAAGCCCCACTGTGACCTAGGCCCTGGAGTAAACACAGTCAGCTCCTG
CCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACTTGGAACGAGT
TCTGGATAACGTCCAACGGAAGTCCTCTTAACACCGAAGCCCTTCCGGCC
AGCTGGCTTGTCATGGCGACGTCGTTTGTCTTGAATGATATCCACTCCAG
TCCACGGTTACCTGCCCTCTTCACCACGGCGAAGCCCTGCGGAACAACGA
TCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTCCCCGTTCTCC
GCTACAATTTGCATCCTGCCGTTGCCCCTTGTTACGTAGACTATGCTGTG
GGCATTCAAGTTCCACTGTGGCGCCAACAGGGCATTCGGGTAAAGGTTTC
CTTTCTCAGCACTAAGCTGGAGGTCTCGAAGGATAGGAAGGTTGAATCTG
TTCACGGTGGTGACACGTCCGGCCCGGGGGTTGTAGACGTCAGCATGTGA
TGGTTTATCGATGTTGTGCCTTAGTTTCATTGTACAGATAGTTTCCTCGA
AGCCATTGTCCCTTTCATATGACGGAGTTTCTTCGCATTCTTCCTGTTCT
TGTTCTCTGTCTCTTTGAGGAGACAGTACTCTCAGCTCTTCCTCGACTCT
GATGATAATGCCCCTCTGTATCTG
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