CX047684

Overview
NameCX047684
Unique NameCX047684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: CRUA_BRANA (Cruciferin OS=Brassica napus GN=CRUA PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.249e-50
Identity = 95/182 (52.20%), Postives = 135/182 (74.18%), Query Frame = -2
Query:  213 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV-FTPGPRSQWG 755
            EETIC+ +   N+D PS+ADVY P+ G ++T+N ++LPILR L+LSA +G++  NA++ PQWN NA++++YVT G   +Q+V +NG+ VFDGQ+ +GQL+ +PQGF+VVKRA +    WI FKTN  A  + LAGR SVLRGLPL+VI N +Q+S +EA+R+K+N  E T+  + GP S  G
Sbjct:  301 EETICSARCTDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSEQFRWIEFKTNANAQINTLAGRTSVLRGLPLEVISNGYQISLEEARRVKFNTIETTLTHSSGPASYGG 482          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: CRU1_BRANA (Cruciferin BnC1 OS=Brassica napus GN=BnC1 PE=3 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.249e-50
Identity = 95/182 (52.20%), Postives = 135/182 (74.18%), Query Frame = -2
Query:  213 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV-FTPGPRSQWG 755
            EETIC+ +   N+D PS+ADVY P+ G ++T+N ++LPILR L+LSA +G++  NA++ PQWN NA++++YVT G   +Q+V +NG+ VFDGQ+ +GQL+ +PQGF+VVKRA +    WI FKTN  A  + LAGR SVLRGLPL+VI N +Q+S +EA+R+K+N  E T+  + GP S  G
Sbjct:  303 EETICSARCTDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSEQFRWIEFKTNANAQINTLAGRTSVLRGLPLEVISNGYQISLEEARRVKFNTIETTLTHSSGPASYGG 484          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: 13S2_FAGES (13S globulin seed storage protein 2 OS=Fagopyrum esculentum GN=FA18 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.249e-50
Identity = 92/174 (52.87%), Postives = 128/174 (73.56%), Query Frame = -2
Query:  234 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 755
            E+  C +K R N + P++  V+NPRAGR+ TVN  +LPIL  LQLSA+   LY NA++ P+WNLNAHS +YVTRG GR+Q+V + G++VFD +++ GQ++VVPQGFAVV +AG  GLEW+  K +  A+TS + GR SVLR +P++V+ NS+ +S  EA +LK  RQE+ VF P
Sbjct:  316 EQGFCNLKFRRNFNTPTNTYVFNPRAGRINTVNSNSLPILEFLQLSAQHVVLYKNAIIGPRWNLNAHSALYVTRGEGRVQVVGDEGKSVFDDKVQRGQILVVPQGFAVVLKAGREGLEWVELKNSGNAITSPIGGRTSVLRAIPVEVLANSYDISTKEAYKLKNGRQEVEVFRP 489          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: 11S3_HELAN (11S globulin seed storage protein G3 OS=Helianthus annuus GN=HAG3 PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.633e-50
Identity = 91/174 (52.30%), Postives = 125/174 (71.84%), Query Frame = -2
Query:  234 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 755
            EETIC+MK + NID PS AD  NP+AG +  +N F  PIL  L+LS E+G L PNA+ +P W +NAH+++YVT G  R+QIV   G +VFD ++REGQ++V+PQ FAV+KRA  +G  W+SFKTND AM + LAGR S     PL +  N +Q+SR+EAQ+LK++++E  +F P
Sbjct:  308 EETICSMKFKVNIDNPSQADFVNPQAGSIANLNSFKFPILEHLRLSVERGELRPNAIQSPHWTINAHNLLYVTEGALRVQIVDNQGNSVFDNELREGQVVVIPQNFAVIKRANEQGSRWVSFKTNDNAMIANLAGRVSASAASPLTLWANRYQLSREEAQQLKFSQRETVLFAP 481          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: CRU4_BRANA (Cruciferin CRU4 OS=Brassica napus GN=CRU4 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.745e-50
Identity = 92/171 (53.80%), Postives = 131/171 (76.61%), Query Frame = -2
Query:  243 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV 755
            EET+CTM+   N+D PS ADVY P  G ++T+N +NLPILR L+LSA +G+++ NA++ PQWN+NA++ +YVT+G   +Q V +NG+ VFD +I +GQL+VVPQGFAVVKRA ++  +WI FK+ND A  + LAGR SV+RGLPL+VI N +Q+S  EA+ +K++  E T+
Sbjct:  279 EETLCTMRCTENLDDPSSADVYKPSLGYISTLNSYNLPILRFLRLSALRGSIHNNAMVLPQWNVNANAALYVTKGKAHIQNVNDNGQRVFDQEISKGQLLVVPQGFAVVKRATSQQFQWIEFKSNDNAQINTLAGRTSVMRGLPLEVISNGYQISPQEARSVKFSTLETTL 449          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: CRU1_RAPSA (Cruciferin PGCRURSE5 OS=Raphanus sativus GN=CRURS PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.745e-50
Identity = 93/171 (54.39%), Postives = 129/171 (75.44%), Query Frame = -2
Query:  243 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV 755
            EETIC+M+   NID P+ ADVY P  GRVT+VN + LPIL+ ++LSA +G L  NA++ P++N+NA+ I+Y T+G  R+Q+V +NG+NV D Q+++GQL+V+PQGFA V ++     EWISFKTN  AM S LAGR S LR LPL+VI N+FQ+S +EA+R+K+N  E T+
Sbjct:  292 EETICSMRTHENIDDPARADVYKPNLGRVTSVNSYTLPILQYIRLSATRGILQGNAMVLPKYNMNANEILYCTQGQARIQVVNDNGQNVLDQQVQKGQLVVIPQGFAYVVQSHGNNFEWISFKTNANAMVSTLAGRTSALRALPLEVITNAFQISLEEARRIKFNTPETTL 462          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: 12S2_ARATH (12S seed storage protein CRB OS=Arabidopsis thaliana GN=CRB PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 4.745e-50
Identity = 94/178 (52.81%), Postives = 130/178 (73.03%), Query Frame = -2
Query:  222 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRS 755
            EET+CTM+   N+D PS ADVY P  G ++T+N +NLPILR L+LSA +G++  NA++ PQWN+NA++ +YVT G   +Q+V +NGE VFD +I  GQL+VVPQGF+V+K A     EWI FKTN+ A  + LAGR SV+RGLPL+VI N +Q+S +EA+R+K++  E T+    P S
Sbjct:  272 EETLCTMRCTENLDDPSDADVYKPSLGYISTLNSYNLPILRLLRLSALRGSIRKNAMVLPQWNVNANAALYVTNGKAHIQMVNDNGERVFDQEISSGQLLVVPQGFSVMKHAIGEQFEWIEFKTNENAQVNTLAGRTSVMRGLPLEVITNGYQISPEEAKRVKFSTIETTLTHSSPMS 449          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: CRU3_BRANA (Cruciferin CRU1 OS=Brassica napus GN=CRU1 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.197e-50
Identity = 93/171 (54.39%), Postives = 129/171 (75.44%), Query Frame = -2
Query:  243 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV 755
            EETIC+M+   NID P+ ADVY P  GRVT+VN + LPIL+ ++LSA +G L  NA++ P++N+NA+ I+Y T+G  R+Q+V +NG+NV D Q+++GQL+V+PQGFA V ++     EWISFKTN  AM S LAGR S LR LPL+VI N+FQ+S +EA+R+K+N  E T+
Sbjct:  322 EETICSMRTHENIDDPARADVYKPNLGRVTSVNSYTLPILQYIRLSATRGILQGNAMVLPKYNMNANEILYCTQGQARIQVVNDNGQNVLDQQVQKGQLVVIPQGFAYVVQSHQNNFEWISFKTNANAMVSTLAGRTSALRALPLEVITNAFQISLEEARRIKFNTLETTL 492          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: GLUB5_ORYSJ (Glutelin type-B 5 OS=Oryza sativa subsp. japonica GN=GLUB5 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.094e-50
Identity = 92/180 (51.11%), Postives = 135/180 (75.00%), Query Frame = -2
Query:  219 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTPGPRSQ 755
            +E  CT+K R NI+ PSHAD YNPRAGR+T +N    PIL  +QLSA + NLY NA+L+P WN+NAHS+VY+ +G+ R+Q+V+  G+ VF+G +R GQL+++PQ + V+K+A + G ++ISFKTN  +M S LAG+ S+ R +P+DVI N++++SR++A+ LK NR +EL  FTP  + Q
Sbjct:  306 DENFCTIKARLNIENPSHADTYNPRAGRITRLNSQKFPILNLVQLSATRVNLYQNAILSPFWNVNAHSLVYIVQGHARVQVVSNLGKTVFNGVLRPGQLLIIPQHYVVLKKAEHEGCQYISFKTNANSMVSHLAGKNSIFRAMPVDVIANAYRISREQARSLKNNRGEELGAFTPRYQQQ 485          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: GLUB4_ORYSJ (Glutelin type-B 4 OS=Oryza sativa subsp. japonica GN=GLUB4 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.094e-50
Identity = 92/180 (51.11%), Postives = 135/180 (75.00%), Query Frame = -2
Query:  219 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTPGPRSQ 755
            +E  CT+K R NI+ PSHAD YNPRAGR+T +N    PIL  +QLSA + NLY NA+L+P WN+NAHS+VY+ +G+ R+Q+V+  G+ VF+G +R GQL+++PQ + V+K+A + G ++ISFKTN  +M S LAG+ S+ R +P+DVI N++++SR++A+ LK NR +EL  FTP  + Q
Sbjct:  306 DENFCTIKARLNIENPSHADTYNPRAGRITRLNSQKFPILNLVQLSATRVNLYQNAILSPFWNVNAHSLVYIVQGHARVQVVSNLGKTVFNGVLRPGQLLIIPQHYVVLKKAEHEGCQYISFKTNANSMVSHLAGKNSIFRAMPVDVIANAYRISREQARSLKNNRGEELGAFTPRYQQQ 485          
The following BLAST results are available for this feature:
BLAST of CX047684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CRUA_BRANA1.249e-5052.20Cruciferin OS=Brassica napus GN=CRUA PE=1 SV=1[more]
CRU1_BRANA1.249e-5052.20Cruciferin BnC1 OS=Brassica napus GN=BnC1 PE=3 SV=... [more]
13S2_FAGES1.249e-5052.8713S globulin seed storage protein 2 OS=Fagopyrum e... [more]
11S3_HELAN3.633e-5052.3011S globulin seed storage protein G3 OS=Helianthus... [more]
CRU4_BRANA4.745e-5053.80Cruciferin CRU4 OS=Brassica napus GN=CRU4 PE=1 SV=... [more]
CRU1_RAPSA4.745e-5054.39Cruciferin PGCRURSE5 OS=Raphanus sativus GN=CRURS ... [more]
12S2_ARATH4.745e-5052.8112S seed storage protein CRB OS=Arabidopsis thalia... [more]
CRU3_BRANA6.197e-5054.39Cruciferin CRU1 OS=Brassica napus GN=CRU1 PE=3 SV=... [more]
GLUB5_ORYSJ8.094e-5051.11Glutelin type-B 5 OS=Oryza sativa subsp. japonica ... [more]
GLUB4_ORYSJ8.094e-5051.11Glutelin type-B 4 OS=Oryza sativa subsp. japonica ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15H07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15H07-P14-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047684 ID=CX047684; Name=CX047684; organism=Citrus sinensis; type=EST; length=759bp
TTTTTTTTTTTTTTTTTGCGCAAAGAAATATTATTTTTTTATTTTACTCG
CATCTTAAACTTACATACAGTCCCGCAGCATTCATGTCGTTCATGCCCAT
TAAGGCTTTTATTCATACATAGTCGTCCCTACCTCAACTACTTACACTAC
AATACATAGCTTACTTCCTGATTACGTACCCATTTACATAATTTCTCTTA
GGCTACGGTTAAGCCCCACTGCGACCTAGGCCCTGGAGTAAACACAGTCA
GCTCCTGCCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACTTGG
AACGAGTTCTGGATAACGTCCAACGGAAGCCCTCTTAACACCGAAGCCCT
TCCGGCCAGCTGGCTTGTCATGGCGACGTCGTTTGTCTTGAATGATATCC
ACTCCAGTCCACGGTTACCTGCCCTCTTCACGACGGCGAAGCCCTGCGGA
ACAACGATCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTCCCC
GTTCTCCGCTACAATTTGCATCCTGCCGTTGCCCCTTGTTACGTAGACTA
TGCTGTGGGCATTCAAGTTCCACTGTGGCGCCAACAGGGCATTCGGGTAA
AGGTTTCCTTTCTCAGCACTAAGCTGGAGGTCTCGAAGGATAGGAAGGTT
GAATCTGTTGACGGTGGTGACACGTCCGGCCCGGGGGTTGTAGACATCAG
CGTGTGATGGTTTATCGATGTTGTGCCTTAGTTTCATTGTACAGATAGTT
TCCTCGAAG
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