CX047684

Overview
NameCX047684
Unique NameCX047684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: GLUB1_ORYSJ (Glutelin type-B 1 OS=Oryza sativa subsp. japonica GN=GluB1-A PE=2 SV=3)

HSP 1 Score: 192.586 bits (488), Expect = 1.994e-48
Identity = 92/181 (50.83%), Postives = 133/181 (73.48%), Query Frame = -2
Query:  216 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTPGPRSQW 755
            EE  CT+K+R NI+ PS AD YNPRAGR+T+VN    PIL  +Q+SA + NLY NA+L+P WN+NAHS+VY+ +G  R+Q+V+  G+ VFDG +R GQL+++PQ +AV+K+A   G ++I+ KTN  A  S LAG+ SV R LP+DV+ N++++SR++A+ LK NR +E   FTP  + Q+
Sbjct:  305 EENFCTIKVRVNIENPSRADSYNPRAGRITSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVNAHSLVYMIQGRSRVQVVSNFGKTVFDGVLRPGQLLIIPQHYAVLKKAEREGCQYIAIKTNANAFVSHLAGKNSVFRALPVDVVANAYRISREQARSLKNNRGEEHGAFTPRFQQQY 485          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: SSG2_AVESA (12S seed storage globulin 2 OS=Avena sativa PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.576e-48
Identity = 86/175 (49.14%), Postives = 128/175 (73.14%), Query Frame = -2
Query:  234 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 755
            EE  C+++ R NI+ P  AD YNPRAGR+T +N  N P L  +Q+SA + NLY NA+L+P WN+NAHS++++ +G  R+Q+V  +G+ VF+  +R GQL+++PQ + V+K+A   G ++ISFKTN  +M SQ+AG+ S+LR LP+DV+ N++++SR EAQ LK NR +E   FTP
Sbjct:  320 EENFCSLEARQNIENPKRADTYNPRAGRITHLNSKNFPTLNLVQMSATRVNLYQNAILSPYWNINAHSVMHMIQGRARVQVVNNHGQTVFNDILRRGQLLIIPQHYVVLKKAEREGCQYISFKTNPNSMVSQIAGKTSILRALPVDVLANAYRISRQEAQNLKNNRGEEFDAFTP 494          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: GLUB2_ORYSJ (Glutelin type-B 2 OS=Oryza sativa subsp. japonica GN=GLUB2 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.688e-47
Identity = 90/181 (49.72%), Postives = 132/181 (72.93%), Query Frame = -2
Query:  216 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTPGPRSQW 755
            EE  CT+K R NI+ PS AD YNPRAGR+++VN    PIL  +Q+SA + NLY NA+L+P WN+NAHS+VY+ +G  R+Q+V+  G+ VFDG +R GQL+++PQ +AV+K+A   G ++I+ KTN  A  S LAG+ SV R LP+DV+ N++++SR++A+ +K NR +E   FTP  + Q+
Sbjct:  301 EENFCTIKARVNIENPSRADSYNPRAGRISSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVNAHSLVYMIQGQSRVQVVSNFGKTVFDGVLRPGQLLIIPQHYAVLKKAEREGCQYIAIKTNANAFVSHLAGKNSVFRALPVDVVANAYRISREQARSIKNNRGEEHGAFTPRFQQQY 481          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: CRU2_BRANA (Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.879e-47
Identity = 89/179 (49.72%), Postives = 132/179 (73.74%), Query Frame = -2
Query:  222 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV-FTPGPRS 755
            EETIC+ +   N+D PS+ADVY P+ G ++ +N ++LPILR L+LSA +G++  NA++ PQW   +++++YVT G  ++Q+V +NG+ VFDGQ+ +GQL+ +PQGF+VVKRA +    WI FKTN  A  + LAGR SV+RGLPL+VI N +Q+S +EA+R+K+N  E T+  + GP S
Sbjct:  309 EETICSARCTDNLDDPSNADVYKPQLGYISILNSYDLPILRVLRLSALRGSIRQNAMVLPQWKSKSNAVLYVTDGEAQIQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSDQFRWIEFKTNANAQINTLAGRTSVMRGLPLEVIANGYQISLEEARRVKFNTIETTLTHSSGPAS 487          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: SSG1_AVESA (12S seed storage globulin 1 OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.429e-46
Identity = 83/175 (47.43%), Postives = 126/175 (72.00%), Query Frame = -2
Query:  234 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 755
            EE  C+++ R NI+ P  AD YNPRAGR+T +N  N P L  +Q+SA + NLY NA+L+P WN+NAHS++++ +G  R+Q+V  +G+ VF+  +R GQL+++PQ + V+K+A   G ++ISFKT   +M S +AG+ S+LR LP+DV+ N++++SR E+Q LK NR +E   FTP
Sbjct:  320 EENFCSLEARQNIENPKRADTYNPRAGRITHLNSKNFPTLNLVQMSATRVNLYQNAILSPYWNINAHSVMHMIQGRARVQVVNNHGQTVFNDILRRGQLLIIPQHYVVLKKAEREGCQYISFKTTPNSMVSYIAGKTSILRALPVDVLANAYRISRQESQNLKNNRGEEFGAFTP 494          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: 11S2_SESIN (11S globulin seed storage protein 2 OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.209e-45
Identity = 87/178 (48.88%), Postives = 125/178 (70.22%), Query Frame = -2
Query:  225 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTPGPR 755
            EET CTMK R N++    AD+++ +AGRV  V+R  LPIL+ + LSAEKGNLY NAL++P W++  H+IVYVTRG+ ++Q+V  NG+ + + ++ +G++ VVPQ +    RAGN G EW++FKT    M S LAG  SV+R +PL VI NS+Q+S ++AQ LK NR  +  + +PG R
Sbjct:  280 EETFCTMKFRTNVESRREADIFSRQAGRVHVVDRNKLPILKYMDLSAEKGNLYSNALVSPDWSMTGHTIVYVTRGDAQVQVVDHNGQALMNDRVNQGEMFVVPQYYTSTARAGNNGFEWVAFKTTGSPMRSPLAGYTSVIRAMPLQVITNSYQISPNQAQALKMNRGSQSFLLSPGGR 457          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: GLYG4_SOYBN (Glycinin G4 OS=Glycine max GN=GY4 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.113e-42
Identity = 81/164 (49.39%), Postives = 114/164 (69.51%), Query Frame = -2
Query:  264 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKY 755
            EE ICT+KL  NI +PS AD YNP+AGR++T+N   LP LR  QLSA+   LY N + +P WNLNA+S++YVTRG G++++V   G  VFDG++R GQL+VVPQ F V ++AG +G E+I FKT+  A+TS L     V R +P +V+ +S+ + + +   LKY
Sbjct:  380 EENICTLKLHENIARPSRADFYNPKAGRISTLNSLTLPALRQFQLSAQYVVLYKNGIYSPHWNLNANSVIYVTRGQGKVRVVNCQGNAVFDGELRRGQLLVVPQNFVVAEQAGEQGFEYIVFKTHHNAVTSYL---KDVFRAIPSEVLAHSYNLRQSQVSELKY 540          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: LEGA_PEA (Legumin A OS=Pisum sativum GN=LEGA PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.026e-41
Identity = 80/165 (48.48%), Postives = 116/165 (70.30%), Query Frame = -2
Query:  261 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYN 755
            EET+CT KLR NI   S  D+YNP AGR+ TV   +LP+LR L+LSAE G+L+ NA+  P +NLNA+SI+Y  +G  R+Q+V  NG  VFDG++  G+ + VPQ +AV  ++ +    +++FKTND A  ++LAG +SV+  LPLDV+  +F + R+EA++LK N
Sbjct:  335 EETVCTAKLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSLSDRFSYVAFKTNDRAGIARLAGTSSVINNLPLDVVAATFNLQRNEARQLKSN 499          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: LEGA2_PEA (Legumin A2 OS=Pisum sativum GN=LEGA2 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.026e-41
Identity = 80/165 (48.48%), Postives = 116/165 (70.30%), Query Frame = -2
Query:  261 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYN 755
            EET+CT KLR NI   S  D+YNP AGR+ TV   +LP+LR L+LSAE G+L+ NA+  P +NLNA+SI+Y  +G  R+Q+V  NG  VFDG++  G+ + VPQ +AV  ++ +    +++FKTND A  ++LAG +SV+  LPLDV+  +F + R+EA++LK N
Sbjct:  338 EETVCTAKLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSLSDRFSYVAFKTNDRAGIARLAGTSSVINNLPLDVVAATFNLQRNEARQLKSN 502          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: LEGB7_VICFA (Legumin type B (Fragment) OS=Vicia faba GN=LEB7 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.259e-41
Identity = 86/180 (47.78%), Postives = 119/180 (66.11%), Query Frame = -2
Query:  219 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAG-NRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 755
            EETIC++K+R NI +P+ AD+YNPRAG ++T N   LPILR L+LSAE   LY N + AP WN+NA+S++YV RG GR++IV   G  VFD ++R+GQL+VVPQ F V ++AG   GLE++ FKTND A  S +     V R  P DV+ N+F + + +   LK +     +  P  +SQ
Sbjct:  157 EETICSLKIRENIAQPARADLYNPRAGSISTANSLTLPILRYLRLSAEYVRLYRNGIYAPHWNINANSLLYVIRGEGRVRIVNSQGNAVFDNKVRKGQLVVVPQNFVVAEQAGEEEGLEYLVFKTNDRAAVSHV---QQVFRATPADVLANAFGLRQRQVTELKLSGNRGPLVHPHSQSQ 333          
The following BLAST results are available for this feature:
BLAST of CX047684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
GLUB1_ORYSJ1.994e-4850.83Glutelin type-B 1 OS=Oryza sativa subsp. japonica ... [more]
SSG2_AVESA7.576e-4849.1412S seed storage globulin 2 OS=Avena sativa PE=3 S... [more]
GLUB2_ORYSJ1.688e-4749.72Glutelin type-B 2 OS=Oryza sativa subsp. japonica ... [more]
CRU2_BRANA2.879e-4749.72Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3 SV=... [more]
SSG1_AVESA5.429e-4647.4312S seed storage globulin 1 OS=Avena sativa PE=2 S... [more]
11S2_SESIN1.209e-4548.8811S globulin seed storage protein 2 OS=Sesamum ind... [more]
GLYG4_SOYBN8.113e-4249.39Glycinin G4 OS=Glycine max GN=GY4 PE=1 SV=1[more]
LEGA_PEA4.026e-4148.48Legumin A OS=Pisum sativum GN=LEGA PE=2 SV=1[more]
LEGA2_PEA4.026e-4148.48Legumin A2 OS=Pisum sativum GN=LEGA2 PE=3 SV=1[more]
LEGB7_VICFA5.259e-4147.78Legumin type B (Fragment) OS=Vicia faba GN=LEB7 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15H07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15H07-P14-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047684 ID=CX047684; Name=CX047684; organism=Citrus sinensis; type=EST; length=759bp
TTTTTTTTTTTTTTTTTGCGCAAAGAAATATTATTTTTTTATTTTACTCG
CATCTTAAACTTACATACAGTCCCGCAGCATTCATGTCGTTCATGCCCAT
TAAGGCTTTTATTCATACATAGTCGTCCCTACCTCAACTACTTACACTAC
AATACATAGCTTACTTCCTGATTACGTACCCATTTACATAATTTCTCTTA
GGCTACGGTTAAGCCCCACTGCGACCTAGGCCCTGGAGTAAACACAGTCA
GCTCCTGCCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACTTGG
AACGAGTTCTGGATAACGTCCAACGGAAGCCCTCTTAACACCGAAGCCCT
TCCGGCCAGCTGGCTTGTCATGGCGACGTCGTTTGTCTTGAATGATATCC
ACTCCAGTCCACGGTTACCTGCCCTCTTCACGACGGCGAAGCCCTGCGGA
ACAACGATCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTCCCC
GTTCTCCGCTACAATTTGCATCCTGCCGTTGCCCCTTGTTACGTAGACTA
TGCTGTGGGCATTCAAGTTCCACTGTGGCGCCAACAGGGCATTCGGGTAA
AGGTTTCCTTTCTCAGCACTAAGCTGGAGGTCTCGAAGGATAGGAAGGTT
GAATCTGTTGACGGTGGTGACACGTCCGGCCCGGGGGTTGTAGACATCAG
CGTGTGATGGTTTATCGATGTTGTGCCTTAGTTTCATTGTACAGATAGTT
TCCTCGAAG
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