CX047672

Overview
NameCX047672
Unique NameCX047672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2_PONAB (Cell division control protein 2 homolog OS=Pongo abelii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.200e-56
Identity = 109/214 (50.93%), Postives = 145/214 (67.76%), Query Frame = -2
Query:  273 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDW-HVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLD 911
            +L  DLKK++DS   G   + +  +L++S+LYQ+ +G+  CHS  VLHRDLKPQN               GL RAF +P++ YTHE+VTLWYR+PEVLLGS  YST VD+WS+G IFAE+  ++ LF GDSE  QL  IFR LGTP  + WP V +L+D+ + +P+W+P +L   V +L   G+DLLS ML Y+PA RIS K A+ HPYF+ LD
Sbjct:   82 FLSMDLKKYLDSIPPG---QYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADF-GLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2A_XENLA (Cell division control protein 2-A OS=Xenopus laevis GN=cdc2-A PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.200e-56
Identity = 110/216 (50.93%), Postives = 148/216 (68.52%), Query Frame = -2
Query:  267 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDW-HVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDKS 911
            +L  DLKK++DS    P+ + +   L++S+LYQ+ +G+  CHS  VLHRDLKPQN               GL RAF +P++ YTHE+VTLWYRAPEVLLGS  YST VD+WS+G IFAE+  ++ LF GDSE  QL  IFR LGTP  + WP V +L+D+ + +P+W+  +L   V ++  +G+DLL+ ML Y+PA RISA+ A+ HPYFD LDKS
Sbjct:   82 FLSMDLKKYLDSI---PSGQYIDTMLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDSKGVIKLADF-GLARAFGIPVRVYTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNSFPKWKGGSLSANVKNIDKDGLDLLAKMLIYDPAKRISARKALLHPYFDDLDKS 293          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.673e-56
Identity = 112/216 (51.85%), Postives = 140/216 (64.81%), Query Frame = -2
Query:  267 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDW-HVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDKS 911
            YLD DLKK++DS         L P LI+S+LYQL KG+A+ H H +LHRDLKPQN               GL RA ++P++ YTHEIVTLWYRAPEVLLGS  YS  VDMWSVGCIF EM+ ++ LF GD E  Q+  IFR+LGTP +  WPGV+ L ++   +P W  Q   +  P   P  +DL++ ML+Y P+ RISAK A+ HPYF  LD S
Sbjct:   86 YLDQDLKKYMDS------VPALCPQLIKSYLYQLLKGLAYSHGHRILHRDLKPQNLLIDRQGALKLADF-GLARAVSIPVRVYTHEIVTLWYRAPEVLLGSKSYSVPVDMWSVGCIFGEMLNKKPLFSGDCEIDQIFRIFRVLGTPDDSIWPGVTKLPEYVSTFPNWPGQPYNKIFPRCEPLALDLIAKMLQYEPSKRISAKEALLHPYFGDLDTS 294          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.673e-56
Identity = 109/214 (50.93%), Postives = 144/214 (67.29%), Query Frame = -2
Query:  273 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDW-HVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLD 911
            +L  DLKK++DS   G   + +  +L++S+LYQ+ +G+  CHS  VLHRDLKPQN               GL RAF +P++ YTHE+VTLWYR+PEVLLGS  YST VD+WS+G IFAE+  ++ LF GDSE  QL  IFR LGTP  + WP V +L+D+   +P+W+P +L   V +L   G+DLLS ML Y+PA RIS K A+ HPYF+ LD
Sbjct:   82 FLSMDLKKYLDSIPPG---QFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADF-GLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKSTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2_HUMAN (Cell division control protein 2 homolog OS=Homo sapiens GN=CDC2 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 4.559e-56
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = -2
Query:  273 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDW-HVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLD 911
            +L  DLKK++DS   G   + +  +L++S+LYQ+ +G+  CHS  VLHRDLKPQN               GL RAF +P++ YTHE +TLWYR+PEVLLGS  YST VD+WS+G IFAE+  ++ LF GDSE  QL  IFR LGTP  + WP V +L+D+ + +P+W+P +L   V +L   G+DLLS ML Y+PA RIS K A+ HPYF+ LD
Sbjct:   82 FLSMDLKKYLDSIPPG---QYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADF-GLARAFGIPIRVYTHEAITLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2_AJECA (Cell division control protein 2 OS=Ajellomyces capsulata GN=CDC2 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.776e-56
Identity = 110/227 (48.46%), Postives = 146/227 (64.32%), Query Frame = -2
Query:  279 YLDTDLKKFIDSH--RKGPNPRPLPP-------------TLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHV-YPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDS 911
            +LD DLKK++++    +G   + LP               +++ F+ QL +G+ +CHSH VLHRDLKPQN               GL RAF VPL++YTHE+VTLWYRAPE+LLG   YST VDMWSVG IFAEM  R+ LFPGDSE  ++  IF++LGTP E  WPGV++  D+   +P+W+ ++  + VP L   G+DLL  ML+Y+PA RISAK A  HPYF +
Sbjct:   84 FLDLDLKKYMEALPVSEGGRGKALPDGSTLDMNRLGLGEAMVKKFMAQLVEGIRYCHSHRVLHRDLKPQNLLIDREGNLKLADF-GLARAFGVPLRTYTHEVVTLWYRAPEILLGGRQYSTGVDMWSVGAIFAEMCTRKPLFPGDSEIDEIFKIFKLLGTPDENTWPGVTSFPDFKASFPKWKREDTRKLVPGLERNGLDLLDAMLEYDPARRISAKQACMHPYFQA 309          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2_RANDY (Cell division control protein 2 homolog OS=Rana dybowskii GN=CDC2 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.955e-55
Identity = 108/216 (50.00%), Postives = 146/216 (67.59%), Query Frame = -2
Query:  267 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDW-HVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDKS 911
            +L  DLKK++DS    P+ + L   L++S+LYQ+ +G+  CH+  VLHRDLKPQN               GL RAF +P++ YTHE+VTLWYRAPEVLLGS  YST VD+WS+G IFAE+  ++ LF GDSE  QL  I  + GTP  + WP V +L+D+ + +P+W+  +L   V ++  EG+DLL+ ML Y+PA RISA+ A+ HPYFD LDKS
Sbjct:   82 FLSMDLKKYLDSI---PSGQYLEAMLVKSYLYQILQGIIFCHARRVLHRDLKPQNLLIDSKGVIKLADF-GLARAFGIPVRVYTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIASKKPLFHGDSEIDQLFRISELWGTPNNEVWPEVESLQDYKNTFPKWKGGSLAANVKNIDKEGLDLLAKMLVYDPAKRISARKALLHPYFDDLDKS 293          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2_EMENI (Cell division control protein 2 OS=Emericella nidulans GN=nimX PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.859e-55
Identity = 109/224 (48.66%), Postives = 144/224 (64.29%), Query Frame = -2
Query:  285 YLDTDLKKFIDSH--RKGPNPRPLPP------------TLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWH-VYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYF 911
            +LD DLKK++++    +G   R LP              +++ F+ QL +G+  CHSH VLHRDLKPQN               GL RAF VPL++YTHE+VTLWYR+PE+LLG   YST VDMWS G IFAEM  R+ LFPGDSE  ++  IFR+LGTP E  WPGV++  D+   +P+W+ +++   VP L  +G+DLL  +L+Y+PA RISAK A  HPYF
Sbjct:   84 FLDLDLKKYMEALPVSEGGRGRALPDGSTLSRNLGLGDAMVKKFMAQLIEGIRFCHSHRVLHRDLKPQNLLIDRDGNLKLADF-GLARAFGVPLRTYTHEVVTLWYRSPEILLGGRQYSTGVDMWSCGAIFAEMCTRKPLFPGDSEIDEIFKIFRILGTPDETIWPGVTSFPDFKPTFPKWKREDIQNVVPGLEEDGLDLLEALLEYDPARRISAKQACMHPYF 306          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2H_THEPA (Cell division control protein 2 homolog OS=Theileria parva GN=CRK2 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.583e-55
Identity = 109/215 (50.70%), Postives = 142/215 (66.05%), Query Frame = -2
Query:  270 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHV-YPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDK 911
            YLD DLKK +D+   G     L PT  +SFLYQ+ +G+++CH H +LHRDLKPQN               GL RAF +P++SYTHE+VTLWYRAP+VL+GS  YSTAVD+WSVGCIFAEM+    LFPG SE  QL  IF++LGTP+   WP V  L  ++  +  +E Q+    VP L+  G+DL+S ML+ +P  RISAK A++H YF  L +
Sbjct:   81 YLDQDLKKLLDACDGG-----LEPTTAKSFLYQILRGISYCHDHRILHRDLKPQNLLINREGVLKLADF-GLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMINGVPLFPGISEQDQLKRIFKILGTPSVDSWPQVVNLPAYNPDFSYYEKQSWSSIVPKLNESGIDLISRMLQLDPVQRISAKEALKHDYFKDLHR 289          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CC2H3_TRYBB (Cell division control protein 2 homolog 3 OS=Trypanosoma brucei brucei GN=CRK3 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.123e-54
Identity = 108/212 (50.94%), Postives = 144/212 (67.92%), Query Frame = -2
Query:  285 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTP--TEKQWPGVSTLRDWH-VYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYF 911
            Y+D DLKK ++  R G        T ++  +YQL +G++ CH H ++HRDLKP N               GL RAF +P+ +YTHE+VTLWYRAPE+LLG  HY+ AVDMWS+GCIFAE+ R + LF GDSE  QL  IF++LGTP   E  W GVS+L D+  V+P+W  + L + +P+L  + VDLLS ML+YNPA+RISAKAA++HP+F
Sbjct:  101 YVDHDLKKALEK-RGGA----FTGTTLKKIIYQLLEGLSFCHRHRIVHRDLKPANILVTTDNSVKIADF-GLARAFQIPMHTYTHEVVTLWYRAPEILLGEKHYTPAVDMWSIGCIFAELARGKVLFRGDSEIGQLFEIFQVLGTPMDAEGSWLGVSSLPDYRDVFPKWSGKPLTQVLPTLDGDAVDLLSQMLRYNPAERISAKAALQHPWF 306          
The following BLAST results are available for this feature:
BLAST of CX047672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_PONAB1.200e-5650.93Cell division control protein 2 homolog OS=Pongo a... [more]
CDC2A_XENLA1.200e-5650.93Cell division control protein 2-A OS=Xenopus laevi... [more]
CDC2_DICDI2.673e-5651.85Cell division control protein 2 homolog OS=Dictyos... [more]
CDC2_BOVIN2.673e-5650.93Cell division control protein 2 homolog OS=Bos tau... [more]
CDC2_HUMAN4.559e-5650.47Cell division control protein 2 homolog OS=Homo sa... [more]
CDC2_AJECA7.776e-5648.46Cell division control protein 2 OS=Ajellomyces cap... [more]
CDC2_RANDY2.955e-5550.00Cell division control protein 2 homolog OS=Rana dy... [more]
CDC2_EMENI3.859e-5548.66Cell division control protein 2 OS=Emericella nidu... [more]
CDC2H_THEPA6.583e-5550.70Cell division control protein 2 homolog OS=Theiler... [more]
CC2H3_TRYBB1.123e-5450.94Cell division control protein 2 homolog 3 OS=Trypa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15G11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15G11-N22-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047672 ID=CX047672; Name=CX047672; organism=Citrus sinensis; type=EST; length=912bp
AATGACATAAAAGAAAGATTGTAGAAATTGAAAACGATCATATTACAAAG
TTCAGAACTTCAGATGGTGAAATCACCAAGATGATGACAACTAACATGAC
ATACGGACTTGACAGAATTATGTTTAAGAGTTTAAAACAAGTCACCCCTT
CTATAACTTCAATACAAGAAAATGAATTCCTACAACAAACTGTATCACAA
CCGAAGAACTGAAGAAAGAGAAGTAGAATTTCACATAAGCAGCAGGGTAC
TGCAACTTCAGTATTGAGACTTGTCAAGGCTGTCAAAATAGGGATGTTCC
ATAGCTGCTTTCGCTGAAATTCTGTCTGCTGGATTGTATTTCAGCATTAA
CGACAGAAGATCAACTCCCTCAGGACTCAGAGATGGAACAGCACGTGGCA
AGTTCTGCGGCTCCCACTGTGGATACACATGCCAGTCCCTCAGAGTAGAA
ACACCTGGCCACTGTTTCTCAGTTGGTGTTCCCAGCATCCTGAAAATATG
AAGCAATTGCTGGAACTCAGAGTCACCAGGGAACAAAGCCTGCCTTCTAA
CCATCTCAGCGAAAATGCAACCAACGGACCACATGTCGACAGCAGTGGAG
TAATGAGTGGAACCAAGAAGCACCTCGGGAGCCCTATACCAGAGAGTAAC
AATCTCGTGGGTATAGCTTTTGAGAGGAACGGTGAAGGCGCGTCCGAGGC
CAAGATCGGCGATCTTGAGAATCCCCTTGTCCTTATCAAGGAGAAGATTC
TGCGGCTTCAGGTCGCGATGAAGGACACCGTGGCTGTGGCAGTGGGCGAC
GCCTTTGCAAAGCTGGTACAAGAAGCTCTGAATGAGAGTGGGGGGCAGCG
GCCTCGGATTGGGGCCCTTGCGGTGCGAGTCGATGAATTTCTTTAGATCG
GTATCGAGGTAT
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