CX047672

Overview
NameCX047672
Unique NameCX047672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2H_THEAN (Cell division control protein 2 homolog OS=Theileria annulata GN=CRK2 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.267e-54
Identity = 109/215 (50.70%), Postives = 140/215 (65.12%), Query Frame = -2
Query:  270 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHV-YPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDK 911
            YLD DLKK +D+   G     L PT  +SFLYQ+ +G+++CH H +LHRDLKPQN               GL RAF +P++SYTHE+VTLWYRAP+VL+GS  YSTAVD+WSVGCIFAEM+    LFPG SE  QL  IF++LGTP    WP V  L  ++  +  +E Q     VP L+  G+DL+S ML+ +P  RISAK A++H YF  L +
Sbjct:   81 YLDQDLKKLLDACDGG-----LEPTTAKSFLYQILRGISYCHDHRILHRDLKPQNLLINREGVLKLADF-GLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMINGVPLFPGISEQDQLKRIFKILGTPNVDSWPQVVNLPAYNPDFCYYEKQAWSSIVPKLNESGIDLISRMLQLDPVQRISAKEALKHDYFKDLHR 289          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2_DROME (Cell division control protein 2 homolog OS=Drosophila melanogaster GN=cdc2 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.267e-54
Identity = 106/211 (50.24%), Postives = 137/211 (64.93%), Query Frame = -2
Query:  282 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDW-HVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFD 911
            +L  DLKK++DS    P  + +   L++S+LYQ+   +  CH   VLHRDLKPQN               GLGR+F +P++ YTHEIVTLWYRAPEVLLGS  YS  VD+WS+GCIFAEM  R+ LF GDSE  QL  +FR+L TPTE  WPGV++L D+ + +P W    L   + +L   G+DL+  ML Y+P  RISAK  +EHPYF+
Sbjct:   82 FLSMDLKKYMDSL---PVDKHMESELVRSYLYQITSAILFCHRRRVLHRDLKPQNLLIDKSGLIKVADF-GLGRSFGIPVRIYTHEIVTLWYRAPEVLLGSPRYSCPVDIWSIGCIFAEMATRKPLFQGDSEIDQLFRMFRILKTPTEDIWPGVTSLPDYKNTFPCWSTNQLTNQLKNLDANGIDLIQKMLIYDPVHRISAKDILEHPYFN 288          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDK2_MOUSE (Cell division protein kinase 2 OS=Mus musculus GN=Cdk2 PE=1 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 5.573e-54
Identity = 119/263 (45.25%), Postives = 149/263 (56.65%), Query Frame = -2
Query:  270 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEM------------------------------------------------VRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWH-VYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDK 911
            +L  DLKKF+D+      P PL    I+S+L+QL +G+A CHSH VLHRDLKPQN               GL RAF VP+++YTHE+VTLWYRAPE+LLG  +YSTAVD+WS+GCIFAEM                                                V R+ALFPGDSE  QL  IFR LGTP E  WPGV+++ D+   +P+W  Q+  + VP L  +G  LLS ML Y+P  RISAKAA+ HP+F  + K
Sbjct:   82 FLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADF-GLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMHLVCTQHHAKCCGEHRRNGRHSLCPLCSYLEVAASQGGGMTAVSAPHPVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 339          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 4.718e-53
Identity = 106/214 (49.53%), Postives = 139/214 (64.95%), Query Frame = -2
Query:  273 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHV-YPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLD 911
            YLD DLKK++D    G   +P     I+SF+YQL KGVA CH H VLHRDLKPQN               GL RAF +P+++Y+HE+VTLWYRAP+VL+GS  YST +D+WS GCIFAEM   + LFPG     QL  IF++LGTP E+ WP ++ L ++   +P      L   V  L  +G++LLS ML+Y+P  RI+A AA++HPYFD L+
Sbjct:   82 YLDQDLKKYLDECG-GEISKPT----IKSFMYQLLKGVAFCHDHRVLHRDLKPQNLLINRKGELKLADF-GLARAFGIPVRTYSHEVVTLWYRAPDVLMGSRKYSTPIDIWSAGCIFAEMASGRPLFPGSGTSDQLFRIFKILGTPNEESWPSITELPEYKTDFPVHPAHQLSSIVHGLDEKGLNLLSKMLQYDPNQRITAAAALKHPYFDGLE 289          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2C_DROME (Cell division control protein 2 cognate OS=Drosophila melanogaster GN=cdc2c PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.793e-52
Identity = 104/210 (49.52%), Postives = 138/210 (65.71%), Query Frame = -2
Query:  285 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHV-YPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYF 911
            YL+ DLKK +D  +         P LI+S+++Q+   V  CH++ +LHRDLKPQN               GL RAF VP+++YTHE+VTLWYRAPE+LLG+  YST VD+WS+GCIF+EM+ R++LFPGDSE  QL  IFR L TP E  WPGV+ L D+   +P+WE  N+P+  P    E  +L+  ML Y+P  RISAK A++H YF
Sbjct:   86 YLNMDLKKLMDKKKD-----VFTPQLIKSYMHQILDAVGFCHTNRILHRDLKPQNLLVDTAGKIKLADF-GLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPRWEGTNMPQ--PITEHEAHELIMSMLCYDPNLRISAKDALQHAYF 287          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAYO (Cell division control protein 2 homolog OS=Plasmodium yoelii yoelii GN=CRK2 PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.897e-52
Identity = 107/210 (50.95%), Postives = 132/210 (62.86%), Query Frame = -2
Query:  285 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHV-YPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYF 911
            +LD DLKK ID    G     L     +SFL QL  G+A+CH H VLHRDLKPQN               GL RAF +P + YTHE+VTLWYRAP++L+GS  YST +D+WSVGCIFAEMV  + LFPG SE  QL+ IF++LGTP  + WP V  L  +   +P +EP      +  L   G+DLLS MLK +P  RI+AK A+EHPYF
Sbjct:   82 HLDQDLKKLIDVCDGG-----LESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREGELKIADF-GLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSETDQLMRIFKILGTPNSQNWPDVFKLPKYDPNFPVYEPLPWETFIKGLDDTGIDLLSKMLKLDPNQRITAKQAIEHPYF 285          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2H_PLACH (Cell division control protein 2 homolog OS=Plasmodium chabaudi GN=CRK2 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.982e-51
Identity = 106/210 (50.48%), Postives = 132/210 (62.86%), Query Frame = -2
Query:  285 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHV-YPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYF 911
            +LD DLKK ID    G     L     +SFL QL  G+A+CH H VLHRDLKPQN               GL RAF +P + YTHE+VTLWYRAP++L+GS  YST +D+WSVGCIFAEMV  + LFPG S+  QL+ IF++LGTP  + WP V  L  +   +P +EP      +  L   G+DLLS MLK +P  RI+AK A+EHPYF
Sbjct:   81 HLDQDLKKLIDVCDGG-----LESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREGELKIADF-GLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSDTDQLMRIFKILGTPNSQNWPDVFKLPKYDPNFPVYEPLPWETFIKGLDDTGIDLLSKMLKLDPNQRITAKQAIEHPYF 284          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2H_PLABA (Cell division control protein 2 homolog OS=Plasmodium berghei (strain Anka) GN=CRK2 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.589e-51
Identity = 106/210 (50.48%), Postives = 131/210 (62.38%), Query Frame = -2
Query:  285 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHV-YPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYF 911
            +LD DLKK ID    G     L     +SFL QL  G+A+CH H VLHRDLKPQN               GL RAF +P + YTHE+VTLWYRAP++L+GS  YST +D+WSVGCIFAEMV  + LFPG SE  QL+ IF++LGTP  + WP V  L  +   +P + P      +  L   G+DLLS MLK +P  RI+AK A+EHPYF
Sbjct:   81 HLDQDLKKLIDVCDGG-----LESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREGELKIADF-GLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGASETDQLMRIFKILGTPNSQNWPDVFKLPKYDPNFPVYNPLPWETFIKGLDDTGIDLLSKMLKLDPNQRITAKQAIEHPYF 284          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAVI (Cell division control protein 2 homolog OS=Plasmodium vivax GN=CRK2 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.837e-51
Identity = 105/210 (50.00%), Postives = 132/210 (62.86%), Query Frame = -2
Query:  285 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHV-YPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYF 911
            +LD DLKK +D    G     L     +SFL QL  G+A+CH H VLHRDLKPQN               GL RAF +P++ YTHE+VTLWYRAP++L+GS  YST +DMWSVGCIFAEMV  + LFPG SE  QL+ IFR+LGTP  + WP V+ L  +   +  +EP      +  L   G+DLLS ML+ +P  RI+AK A+EH YF
Sbjct:   81 HLDQDLKKLLDVCDGG-----LESVTAKSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINREGELKIADF-GLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDMWSVGCIFAEMVNGRPLFPGVSETDQLMRIFRILGTPNSENWPNVTELPKYDPDFMVYEPLPWETFLKGLDDTGIDLLSKMLRLDPNQRITAKQALEHAYF 284          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAFK (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CRK2 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.285e-50
Identity = 106/210 (50.48%), Postives = 130/210 (61.90%), Query Frame = -2
Query:  285 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHV-YPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYF 911
            +LD DLKK +D    G     L     +SFL QL  G+A+CH   VLHRDLKPQN               GL RAF +P++ YTHE+VTLWYRAP+VL+GS  YST +D+WSVGCIFAEMV    LFPG SE  QL+ IFR+LGTP  K WP V+ L  +   +  +EP      +  L   G+DLLS MLK +P  RI+AK A+EH YF
Sbjct:   81 HLDQDLKKLLDVCEGG-----LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADF-GLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284          
The following BLAST results are available for this feature:
BLAST of CX047672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2H_THEAN3.267e-5450.70Cell division control protein 2 homolog OS=Theiler... [more]
CDC2_DROME4.267e-5450.24Cell division control protein 2 homolog OS=Drosoph... [more]
CDK2_MOUSE5.573e-5445.25Cell division protein kinase 2 OS=Mus musculus GN=... [more]
CDK5_DICDI4.718e-5349.53Cell division protein kinase 5 homolog OS=Dictyost... [more]
CDC2C_DROME1.793e-5249.52Cell division control protein 2 cognate OS=Drosoph... [more]
CDC2H_PLAYO8.897e-5250.95Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLACH1.982e-5150.48Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLABA2.589e-5150.48Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAVI9.837e-5150.00Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAFK1.285e-5050.48Cell division control protein 2 homolog OS=Plasmod... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15G11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15G11-N22-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047672 ID=CX047672; Name=CX047672; organism=Citrus sinensis; type=EST; length=912bp
AATGACATAAAAGAAAGATTGTAGAAATTGAAAACGATCATATTACAAAG
TTCAGAACTTCAGATGGTGAAATCACCAAGATGATGACAACTAACATGAC
ATACGGACTTGACAGAATTATGTTTAAGAGTTTAAAACAAGTCACCCCTT
CTATAACTTCAATACAAGAAAATGAATTCCTACAACAAACTGTATCACAA
CCGAAGAACTGAAGAAAGAGAAGTAGAATTTCACATAAGCAGCAGGGTAC
TGCAACTTCAGTATTGAGACTTGTCAAGGCTGTCAAAATAGGGATGTTCC
ATAGCTGCTTTCGCTGAAATTCTGTCTGCTGGATTGTATTTCAGCATTAA
CGACAGAAGATCAACTCCCTCAGGACTCAGAGATGGAACAGCACGTGGCA
AGTTCTGCGGCTCCCACTGTGGATACACATGCCAGTCCCTCAGAGTAGAA
ACACCTGGCCACTGTTTCTCAGTTGGTGTTCCCAGCATCCTGAAAATATG
AAGCAATTGCTGGAACTCAGAGTCACCAGGGAACAAAGCCTGCCTTCTAA
CCATCTCAGCGAAAATGCAACCAACGGACCACATGTCGACAGCAGTGGAG
TAATGAGTGGAACCAAGAAGCACCTCGGGAGCCCTATACCAGAGAGTAAC
AATCTCGTGGGTATAGCTTTTGAGAGGAACGGTGAAGGCGCGTCCGAGGC
CAAGATCGGCGATCTTGAGAATCCCCTTGTCCTTATCAAGGAGAAGATTC
TGCGGCTTCAGGTCGCGATGAAGGACACCGTGGCTGTGGCAGTGGGCGAC
GCCTTTGCAAAGCTGGTACAAGAAGCTCTGAATGAGAGTGGGGGGCAGCG
GCCTCGGATTGGGGCCCTTGCGGTGCGAGTCGATGAATTTCTTTAGATCG
GTATCGAGGTAT
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