CX047648

Overview
NameCX047648
Unique NameCX047648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.052e-80
Identity = 149/163 (91.41%), Postives = 152/163 (93.25%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            APQTFRSKEISKSNVVDDMVSSN ILY PGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGK+TIVLHNTCED  L API+LDLVLLAE STRIQLKAEGE K HSFHPVATI SYLTK PLVPPGTPVVNAL KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  348 APQTFRSKEISKSNVVDDMVSSNAILYEPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTCEDSLLRAPIILDLVLLAELSTRIQLKAEGEDKLHSFHPVATILSYLTKAPLVPPGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 298.901 bits (764), Expect = 2.052e-80
Identity = 145/163 (88.96%), Postives = 154/163 (94.48%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            APQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPYV DSKRAMDEYTSEIFMGGKNTIV+HNTCED  LAAPI+LDLVLLAE STRIQ K+EGEGKFHSFHPVATI SYLTK PLVPPGTPV+NAL KQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  349 APQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPYVADSKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLAAPIILDLVLLAELSTRIQFKSEGEGKFHSFHPVATILSYLTKAPLVPPGTPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 1.019e-79
Identity = 147/163 (90.18%), Postives = 152/163 (93.25%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            APQTFRSKEISKSNVVDDMV+SNGIL+ PGEHPDHVVVIKYVPYV DSKRAMDEYTSEIFMGGKNTIV+HNTCED  LAAPI+LDLVLLAE STRIQ K+E EGKFHSFHPVAT  SYLTK PLVPPGTPVVNAL KQRAMLENILRACVGLAPENNMILEYK
Sbjct:  348 APQTFRSKEISKSNVVDDMVASNGILFEPGEHPDHVVVIKYVPYVADSKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLAAPIILDLVLLAEISTRIQFKSEKEGKFHSFHPVATKLSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 6.602e-79
Identity = 144/163 (88.34%), Postives = 151/163 (92.64%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            APQTFRSKEISKSNVVDDMV SNGILY PGEHPDHVVVIKYVP VGDSKRAMDEYTSEIFMGGKNTIV+HNTCED  LAAPI+LDLVLLAE +TRIQ  +E EGKFHSFHPVAT+ SYL+K PLVPPGTPVVNAL KQRAMLEN+LRACVGLAPENNMILEYK
Sbjct:  348 APQTFRSKEISKSNVVDDMVGSNGILYEPGEHPDHVVVIKYVPCVGDSKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLAAPIILDLVLLAELTTRIQFMSENEGKFHSFHPVATLLSYLSKAPLVPPGTPVVNALSKQRAMLENVLRACVGLAPENNMILEYK 510          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.168e-67
Identity = 138/164 (84.15%), Postives = 141/164 (85.98%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYG-PGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            APQTFRSKEISKSNVVDDMVSSN    G     P     IKYVPYV   +RAMDEYTSEIFMGGK+TIVLHNTCED  LAAPI+LDLVLLAE STRIQLKAEGEGKFHSFHPVATI SYLTK PLVPPGTPVVNAL KQRAMLENILRACVGLAPENNMILEYK
Sbjct:  348 APQTFRSKEISKSNVVDDMVSSNVFFMGLVNTRPRW---IKYVPYVA-IERAMDEYTSEIFMGGKSTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 507          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.836e-64
Identity = 115/163 (70.55%), Postives = 139/163 (85.28%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            APQ FRSKEI+KSNVVDDM++SN ILY  GEHPDHV+VIKYVPYVGDSKRAMDEYTS+IFMGG NTIVLHNTCED  LAAPI+LDLV+LAE ++RI +K + + +F +FHPV ++ SYL K P+VP    VVNAL+KQRA +ENI +ACVG+AP+NNM+LE +
Sbjct:  348 APQQFRSKEITKSNVVDDMIASNNILYKQGEHPDHVIVIKYVPYVGDSKRAMDEYTSQIFMGGHNTIVLHNTCEDSLLAAPIILDLVILAEVTSRITMKKQDDDQFATFHPVLSLLSYLLKAPIVPKHATVVNALFKQRACIENIFKACVGIAPDNNMLLEQR 510          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.930e-62
Identity = 116/163 (71.17%), Postives = 134/163 (82.21%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            APQ FRSKEISKSNVVDDMV SN ILYGP E PDH VVIKYVPYVGDSKRAMDEYTSEI MGG NTIVLHNTCED  LA+PI+LDLVLL E   RI  + E + +F +FH V +I S+L K PLVP GTPV+NA ++QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  342 APQQFRSKEISKSNVVDDMVQSNPILYGPNEKPDHCVVIKYVPYVGDSKRAMDEYTSEIMMGGANTIVLHNTCEDSLLASPIILDLVLLTELCQRITFRTETDQEFQTFHSVLSILSFLCKAPLVPAGTPVINAFFRQRNCIENILRACLGLSPQNHMMLEHK 504          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 4.299e-62
Identity = 117/163 (71.78%), Postives = 133/163 (81.60%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            APQ FRSKEISKSNVVDDMV SN ILYGP E PDH VVIKYVPYVGDSKRAMDEYTSEI MGG NTIVLHNTCED  LA+PI LDLVLL E   RI  + E + +F +FH V +I S+L K PLVP GTPVVNA ++QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  342 APQQFRSKEISKSNVVDDMVQSNPILYGPNEKPDHCVVIKYVPYVGDSKRAMDEYTSEIMMGGANTIVLHNTCEDSLLASPIFLDLVLLTELCQRITFRTETDQEFQTFHSVLSILSFLCKAPLVPAGTPVVNAFFRQRNCIENILRACLGLSPQNHMMLEHK 504          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.256e-60
Identity = 108/163 (66.26%), Postives = 133/163 (81.60%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            AP  FRSKE+SKSNVVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCED  LAAPI+LDL LL E   R+    + + +  +FHPV ++ S+L K PLVPPG+PVVNAL++QR+ +ENILRAC+GL P+N+M+LE+K
Sbjct:  345 APLQFRSKEVSKSNVVDDMVQSNPVLYAPGEEPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDADPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACLGLPPQNHMLLEHK 507          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 8.965e-60
Identity = 109/163 (66.87%), Postives = 133/163 (81.60%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            AP  FRSKE+SKSNVVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCED  LAAPI+LDL LL E   R+    + + +  +FHPV ++ S+L K PLVPPG+PVVNAL++QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  345 APLQFRSKEVSKSNVVDDMVQSNPVLYTPGEEPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDMDPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
The following BLAST results are available for this feature:
BLAST of CX047648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_HORVU2.052e-8091.41Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_ARATH2.052e-8088.96Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]
INO1_BRANA1.019e-7990.18Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO3_ARATH6.602e-7988.34Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_CITPA1.168e-6784.15Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_DICDI7.836e-6470.55Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1A_XENLA1.930e-6271.17Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1B_XENLA4.299e-6271.78Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1_MACFA5.256e-6066.26Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]
INO1_HUMAN8.965e-6066.87Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15F04_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15F04-L8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047648 ID=CX047648; Name=CX047648; organism=Citrus sinensis; type=EST; length=779bp
TTTTTTTTTTTTTTTTTGCCGCAATACAGTTATTTATGAACTTCCATATA
TTATCTACTTGCAATACAAAAAATTTCATGCTCCGAAATGAGCTACAAAG
GCAATGGGCTACACTCCAGCACCTTCATTAAAAAAATAAAAAAACAAACA
TACAGGACACACTAATATTAACCACAATTTCATGACACAAGACATTACAA
TCAGTAATTAAATGGACCACCACAGCTTTGATTGGTGACAGAAAAAGGGA
AAACCGGTTCTTCCACTTTTCTCCCCTGCAAGTTCTTCACTTGTATTCCA
AAATCATGTTGTTCTCAGGAGCCAAGCCAACGCAAGCCCTCAAAATGTTC
TCAAGCATTGCACGCTGCTTCCACAGCGCATTCACCACTGGTGTGCCTGG
AGGGACCAAAGGAACCTTGGTGAGGTAGCTGAAAATTGTAGCCACAGGGT
GGAAAGAGTGGAATTTGCCCTCTCCTTCAGCTTTGAGCTGGATCCTGGTG
CTGAATTCAGCCAGCAAAACCAAATCTAGAACGATTGGAGCAGCCAAAAA
AAAGTCCTCACACGTGTTGTGCAGCACAATGGTGTTCTTGCCACCCATGA
AAATTTCTGAAGTGTACTCATCCATGGCTCTCTTGCTATCGCCAACATAT
GGCACATACTTGATGACCACAACGTGGTCGGGGTGTTCACCAGGCCCATA
AAGGATACCATTGCTGGAGACCATGTCATCAACAACATTACTTTTGGAAA
TCTCCTTGGAGCGGAAGGTTTGAGGGGCT
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