CX047544

Overview
NameCX047544
Unique NameCX047544
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDIA1_RABIT (Protein disulfide-isomerase OS=Oryctolagus cuniculus GN=P4HB PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.053e-22
Identity = 75/228 (32.89%), Postives = 109/228 (47.81%), Query Frame = 1
Query:  178 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHG---IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDKSVMSNLALKYKKKAWFAVAKDF----SEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDT 840
            +  V+ L  SNF   +++  ++LV+FYAPWCGHCK LAP+  +AA  L      I +AKVDA + S LA +  +  +PT+K F +G    P EY   R+A+ +V +LKK   P  + L   A     VE++          G  K V S+ A ++   A       F    S D    Y   +   +V  +      N F G   +E L +FIK N LPL +   + T
Sbjct:   24 EDNVLVLKSSNFAEELAAHKHLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSDIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLADSAAAESLVESSEVAV-----IGFFKDVESDAAKQFLLAAEATDDIPFGLTASSDVFSRYQVHQ-DGVVLFKKFDEGRNNFEGEVTKEKLLDFIKHNQLPLVIEFTEQT 245          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDIA1_CHICK (Protein disulfide-isomerase OS=Gallus gallus GN=P4HB PE=1 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 6.914e-22
Identity = 72/224 (32.14%), Postives = 111/224 (49.55%), Query Frame = 1
Query:  187 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHG---IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDKSVMSNLALKYKKKAWFA--VAKDFSEDTMVLYDFDKVPALVALQPSYNE-HNIFYGPFDEEFLEEFIKQNFLPLSVPINQDT 840
            V+ L  +NF+ A+++  ++LV+FYAPWCGHCK LAP+  +AA  L      I +AKVDA + + LA +  +  +PT+K F +G    P EY   R+A+ +V +LKK   P  + L   A     V+++       +  G  K V S+ A ++   A     +    S    V   +      V L   ++E  N F G   ++ L  FIK N LPL +   + T
Sbjct:   31 VLVLRAANFEQALAAHRHLLVEFYAPWCGHCKALAPEYAKAAAQLKAEGSEIRLAKVDATEEAELAQQFGVRGYPTIKFFRNGDKAAPREYTAGREADDIVSWLKKRTGPAATTLTDAAAAETLVDSSEV-----VVIGFFKDVTSDAAKEFLLAAESVDDIPFGISSSADVFSKYQLSQDGVVLFKKFDEGRNNFEGDLTKDNLLNFIKSNQLPLVIEFTEQT 249          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI1_CAEEL (Protein disulfide-isomerase 1 OS=Caenorhabditis elegans GN=pdi-1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.914e-22
Identity = 65/164 (39.63%), Postives = 91/164 (55.49%), Query Frame = 1
Query:  187 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDKSVMSNLALKYKK------KAWFAVA 660
            V+ L ESNF+  I+  +++LV FYAPWC HCK LAP+ DEAA +L +    I +AKVDA +   LASK E+  +PT+  F  G PT+Y G R    +V ++KK   P V+ + S   V    E  G    + +G+   K   S+ A  Y +       A+FAVA
Sbjct:   25 VLVLTESNFEETINGNEFVLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQALASKFEVRGYPTILYFKSGKPTKYTGGRATAQIVDWVKKKSGPTVTTVES---VEQLEELKGKTRVVVLGY--FKDAKSDAATIYNEVADSVDDAFFAVA 183          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI2_CAEEL (Protein disulfide-isomerase 2 OS=Caenorhabditis elegans GN=pdi-2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.179e-21
Identity = 72/233 (30.90%), Postives = 114/233 (48.93%), Query Frame = 1
Query:  187 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFD-----------EEFLEEFIKQNFLPLSVPINQDTLNLL 852
            VI L + NFD  I+  ++ILV+FYAPWCGHCK LAP+  +AA  L +    I + K+DA  +  ++SK E+  +PTLK+F +G P EY G R  + ++ +LKK   P    L     V +  E+A       +  G  K   S+ A     K +  VA    +    +   D V + + L+    E  + +  FD           ++ L+ +I+ N L L     Q+T +++
Sbjct:   25 VIVLTKDNFDEVINGNEFILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTLKLFRNGKPQEYNGGRDHDSIIAWLKKKTGPVAKPLADADAVKELQESADV-----VVIGYFKDTTSDDA-----KTFLEVAAGIDDVPFGISTEDAVKSEIELK---GEGIVLFKKFDDGRVAFDEKLTQDGLKTWIQANRLALVSEFTQETASVI 244          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDIA4_BOVIN (Protein disulfide-isomerase A4 OS=Bos taurus GN=PDIA4 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.540e-21
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = 1
Query:  196 LDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVEN 558
            L + NFD  ++  D ILV+FYAPWCGHCK+LAP+ ++AA  L+K   PI +AKVDA   + LA + ++ ++PTLKIF  G    Y GPR+   +V Y+ +   P    + +  +V +F+++
Sbjct:  181 LTKDNFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKSSPPIPLAKVDAIAETDLAKRFDVSSYPTLKIFRKGKAFSYNGPREKYGIVDYMMEQSGPPSKQILALKQVQEFLKD 301          

HSP 2 Score: 98.9821 bits (245), Expect = 3.794e-20
Identity = 44/119 (36.97%), Postives = 76/119 (63.87%), Query Frame = 1
Query:  154 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPD 510
            +++ + K +  V+ L+++NFD+ ++  D +L++FYAPWCGHCK+ AP+ ++ A  L +   PI +AK+DA   S LAS+ ++  +PT+KI   G   +Y G R  E +V  +K+   P+
Sbjct:   52 DDDLEVKEENGVLILNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIAATLKENDPPIPVAKIDATSESALASRFDVSGYPTIKILKKGQEVDYEGSRTQEEIVAKVKEVSQPN 170          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: GSBP_CHICK (Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Gallus gallus PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.481e-21
Identity = 74/225 (32.89%), Postives = 109/225 (48.44%), Query Frame = 1
Query:  187 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHG---IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGF----GLDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDT 840
            V+   +SNF   +++  Y+ V+FYAP CGHCK LAP   +A   L      I  AKV+A + S LA +  + A+PT+K F +G    P EY   R+A+ +V +LKK   P  + L+  A     V+++     + IGF    G D +    LA        F +  + + D    Y  DK  A+V  +      N F G   +E L +FIK N LPL +   + T
Sbjct:   25 VLVAKKSNFLEPLAAHSYLAVEFYAPLCGHCKALAPDYAKAGGKLKAEGSEIKAAKVEATEESDLAQQYGVRAYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLSDTAAAESLVDSSE--ITVIIGFFKDPGSDSARQFLLAADAVDDVPFGI--NSNSDVYSKYQMDK-DAVVLFKKFAEGRNNFEGEITKEKLLDFIKHNNLPLVIEFTEQT 244          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI1_SCHPO (Putative protein disulfide-isomerase C1F5.02 OS=Schizosaccharomyces pombe GN=SPAC1F5.02 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.442e-19
Identity = 66/228 (28.95%), Postives = 116/228 (50.88%), Query Frame = 1
Query:  169 FKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIP-TEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDKSV---MSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDT 840
            F    +V ++++   +  I++   ++V FYAPWCGHCK LAP+ + AA  L   K+ I + +VD  +   L S+  I  +PTL +F +G   ++Y GPRK + LV+Y++K + P V  ++ D  + +FVE A       + F  D+ +    + +A   K    FA + D      +  +F  + A        ++  ++ G +D   + +FI  + +PL   +NQ T
Sbjct:   18 FCASAEVPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELE--KDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTVKPISKDT-LENFVEKADDL--AVVAFFKDQKLNDTYTEVAEVMKDDFVFAASDDKELAKSLGSNFPGIVAFTKDAAQDSDKLVYTGDWDPASIADFIGVSSIPLLDELNQMT 240          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: ERP60_SCHMA (Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.212e-19
Identity = 57/192 (29.69%), Postives = 94/192 (48.96%), Query Frame = 1
Query:  184 KVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHG-IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIF 756
            KV+EL + NF S + S    LV FYAPWCGHCK+LAP+   AA I++     + + KVD      + S+  +  +PTLKIF +G +  EY GPR A  +  Y+     P    +++ ++V + + +       F+    D  +          K + A+AK   +D +  +  +     + + PS NE  ++
Sbjct:   18 KVLELTKDNFHSELKSIPVALVKFYAPWCGHCKKLAPEFTSAAQIISGKTNDVKLVKVDCTTQESICSEFGVSGYPTLKIFRNGDLDGEYNGPRNANGIANYMISRAGPVSKEVSTVSDVENVLSDDKPTVFAFVKSSSDPLI----------KTFMALAKSMVDDAVFCHSHNN----LFVTPSDNELRVY 195          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI_HUMIN (Protein disulfide-isomerase OS=Humicola insolens PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.478e-19
Identity = 66/222 (29.73%), Postives = 109/222 (49.10%), Query Frame = 1
Query:  187 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIP--TEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFG--LDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDT 840
            V++L +  FD  I + D +L +F+APWCGHCK LAP+ +EAA  L   ++ I +AKVD  + + L  +  ++ +PTLK+F  G+   + Y G RKA  +  Y+ K   P VS +  D  + +F +        ++         V + +A K +    F  + D +   +   +  K PA+V  +       +F   F+ E +E+F K    PL   I  +T
Sbjct:   23 VVQLKKDTFDDFIKTNDLVLAEFFAPWCGHCKALAPEYEEAATTLK--EKNIKLAKVDCTEETDLCQQHGVEGYPTLKVF-RGLDNVSPYKGQRKAAAITSYMIKQSLPAVSEVTKD-NLEEFKKADKAVLVAYVDASDKASSEVFTQVAEKLRDNYPFGSSSDAA---LAEAEGVKAPAIVLYKDFDEGKAVFSEKFEVEAIEKFAKTGATPLIGEIGPET 237          

HSP 2 Score: 74.3294 bits (181), Expect = 1.001e-12
Identity = 46/134 (34.33%), Postives = 68/134 (50.75%), Query Frame = 1
Query:  172 KIDGKVIELDESNFDSAI-SSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAK--LKEPIVIAKVDADKYSRLASKQEIDAFPTLKIF---MHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVE 555
            K +G V  +   N++  +      +L++FYAPWCGHCK LAP+ +E   + AK   K+ +VIAKVDA          EI  FPT+K++     G P  Y G R  E L++++ +      +I     E S   E
Sbjct:  352 KQEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND---VPDEIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKYKAAISEDAEETSSATE 482          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDIA3_PONAB (Protein disulfide-isomerase A3 OS=Pongo abelii GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.478e-19
Identity = 70/239 (29.29%), Postives = 112/239 (46.86%), Query Frame = 1
Query:  187 VIELDESNFDSAIS---SFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPT-EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPS------------YNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLNLLK 855
            V+EL + NF+S IS   S   +LV+F+APWCGHCKRLAP+ + AA    +LK  + +AKVD    +   +K  +  +PTLKIF  G     Y GPR A+ +V +LKK   P    L ++ E   F+ +       F      ++    L      +  +  A    E  +  YD D    ++  +PS            Y E  +  G      +++FI++N   +   + +D  +L++
Sbjct:   27 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAA---TRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYD-DNGEGIILFRPSHLTNKFEDKTVAYTEQKMTSGK-----IKKFIQENIFGICPHMTEDNKDLIQ 256          
The following BLAST results are available for this feature:
BLAST of CX047544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
PDIA1_RABIT4.053e-2232.89Protein disulfide-isomerase OS=Oryctolagus cunicul... [more]
PDIA1_CHICK6.914e-2232.14Protein disulfide-isomerase OS=Gallus gallus GN=P4... [more]
PDI1_CAEEL6.914e-2239.63Protein disulfide-isomerase 1 OS=Caenorhabditis el... [more]
PDI2_CAEEL1.179e-2130.90Protein disulfide-isomerase 2 OS=Caenorhabditis el... [more]
PDIA4_BOVIN1.540e-2141.32Protein disulfide-isomerase A4 OS=Bos taurus GN=PD... [more]
GSBP_CHICK4.481e-2132.89Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
PDI1_SCHPO1.442e-1928.95Putative protein disulfide-isomerase C1F5.02 OS=Sc... [more]
ERP60_SCHMA3.212e-1929.69Probable protein disulfide-isomerase ER-60 OS=Schi... [more]
PDI_HUMIN5.478e-1929.73Protein disulfide-isomerase OS=Humicola insolens P... [more]
PDIA3_PONAB5.478e-1929.29Protein disulfide-isomerase A3 OS=Pongo abelii GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14G07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14G07-N13-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047544 ID=CX047544; Name=CX047544; organism=Citrus sinensis; type=EST; length=877bp
TGCATTCCATTTTGCTCAAAGCGAAACTGAAAACAAATCACATCGAAATT
GAAGATGCGAGGGATGAGTAAAGGTAGAATATGGATCTTATTGTGTCTGT
TGTTATTGACAGGAAGAGGTATGATGTTATTGACAGGAAGAGGCTTGTCT
TCGGAAGAAGAAACAAAATTCAAAATTGACGGGAAAGTAATAGAACTTGA
CGAATCCAACTTCGATTCTGCAATCTCGTCTTTTGATTACATTTTAGTCG
ATTTTTACGCTCCTTGGTGCGGTCACTGCAAGCGCCTCGCTCCTCAGTTA
GACGAAGCTGCTCCGATACTTGCTAAATTGAAAGAGCCAATTGTAATAGC
AAAAGTAGACGCTGACAAGTACAGCCGTCTTGCTAGTAAGCAAGAGATTG
ATGCATTTCCTACATTGAAGATATTTATGCATGGGATTCCTACGGAATAT
TATGGACCTAGAAAAGCAGAATTGCTTGTTCGTTATCTTAAGAAATTTGT
TGCCCCTGATGTCTCCATTCTTAATTCAGATGCGGAAGTTTCTGACTTTG
TTGAAAATGCTGGTACTTTCTTTCCCCTATTTATTGGTTTTGGGTTGGAT
AAATCAGTCATGTCAAACTTAGCTTTGAAGTATAAGAAAAAGGCCTGGTT
TGCTGTCGCTAAGGATTTCTCTGAGGACACCATGGTGTTGTATGATTTTG
ACAAAGTTCCGGCTTTGGTTGCTCTTCAGCCGAGTTACAATGAGCACAAC
ATTTTTTATGGCCCCTTTGATGAGGAGTTTTTGGAGGAGTTTATAAAACA
AAATTTCCTTCCTCTGTCTGTGCCTATTAACCAAGACACACTGAATCTTT
TGAAAGATGATAAAAGGAAAATTGTCC
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