CX047541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.972e-72 Identity = 137/212 (64.62%), Postives = 168/212 (79.25%), Query Frame = -1 Query: 200 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 835 G E+EL+AIAT RIVPRF EL+ EKLG AGLVRE +FG +DRML IE C N++AVTIF+RGGNKM+I+E KR++HDALCV RNL+R++ IVYGGG+AE+A +I V ADR G+EQYA RAFADAL++IPMALAENSGL PI+ LS +K +QI + GID GTNDM+EQ V ETL+ K++QI LATQVV+MILKIDDV P + Sbjct: 326 GPEIELLAIATNARIVPRFSELSKEKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDVRVPDD 537
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: TCPE_YEAST (T-complex protein 1 subunit epsilon OS=Saccharomyces cerevisiae GN=CCT5 PE=1 SV=3) HSP 1 Score: 246.899 bits (629), Expect = 1.048e-64 Identity = 119/208 (57.21%), Postives = 159/208 (76.44%), Query Frame = -1 Query: 212 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 835 G ELE IAI+T GRIVPRFQ+L+ +KLG + E+ FGTT+DRML IE ++ VT F+RG NKM+++E +R++HD+LCV RNL++++ +VYGGGAAE+ S+AV AD+ G++QYA R FA ALD IPM LAENSGL PI TLS +K++Q++E N G+DC G+NDM+E V + IGK+QQILLATQ+ +MILKID+VI Sbjct: 348 GQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVI 555
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: TCPE_ENCCU (T-complex protein 1 subunit epsilon OS=Encephalitozoon cuniculi GN=CCT5 PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.059e-49 Identity = 101/209 (48.33%), Postives = 142/209 (67.94%), Query Frame = -1 Query: 209 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 835 G ELEL+A+ TGG IV RF++L LGKA VRE+S GT D+++ +E+ S+AVTI +RG N ++IEE KRSI DALC RN++ N+ IVYGGG++E++CS+A++ A Y G E+ AI F AL+ IP+ LA NSG PI S ++ Q+ N + G+DC G DM++ VF+ L K +Q +ATQ+V M+LKID+V+S Sbjct: 321 GHELELLAVHTGGSIVARFEDLEESDLGKAR-VREESLGTENDKIIVVENEGCSKAVTILVRGANDLVIEEAKRSIRDALCAVRNILTNSRIVYGGGSSEMSCSLALERIATGYSGEEREAILGFGRALEEIPLCLARNSGHDPIGYSSDLRKLQMESKNFHLGVDCLGDGEQDMKKLGVFDALSSKIRQFQMATQLVTMVLKIDNVVS 528
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.931e-40 Identity = 92/207 (44.44%), Postives = 131/207 (63.29%), Query Frame = -1 Query: 209 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 829 ++E +A ATG +IV ++LTPE LG+A LV E+ + M+++E C N +AVTI IRGG + +++E +R++ DA+ V ++++ + I+ GGGAAEI SI +D A G EQ AI AFA+AL IP LAEN+GL PIETL V +E P GID + DM E+ V E + K+Q I A++ MIL+IDDVI+ Sbjct: 320 DMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERK--VAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH-KEKGPTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIA 523
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.433e-39 Identity = 91/210 (43.33%), Postives = 132/210 (62.86%), Query Frame = -1 Query: 200 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 829 ++E +A ATG +IV ++LTPE LG+A LV E+ + M+++E C N +AVTI IRGG + +++E +R++ DA+ V ++++ + I+ GGGA+EI SI +D A G EQ AI AFA+AL IP LAEN+GL PIETL V +E GID + DM E+ V E + K+Q I A++ MIL+IDDVI+ S+ Sbjct: 320 DMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERK--VAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH-KEKGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 5.418e-37 Identity = 88/210 (41.90%), Postives = 129/210 (61.43%), Query Frame = -1 Query: 200 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 829 ++E +A ATG +IV ++LTPE LG+A LV ++ + M+++E C N +AVTI IRGG + +++E +R++ DA+ V ++++ + IV GGA EI SI +D A G EQ AI AFA+AL IP LAEN+GL PIETL V +E P G+D + DM E+ V + +Q I A++ MIL+IDDVI+ S+ Sbjct: 320 DMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRK--VAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH-KEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.207e-36 Identity = 88/207 (42.51%), Postives = 124/207 (59.90%), Query Frame = -1 Query: 209 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 829 ++E +A ATG RIV + +LTPE LG+AGLV E+ D M+++E C + +AVTI RG + ++EE R+I DA+ V + + IV GGGA EI + + A+ G EQ A++AFADAL+ IP LAENSGL PI+ L ++ +E G+D + DM E+ V E L K Q I AT+ M+L+IDDVI+ Sbjct: 317 DMEKLAKATGARIVTKIDDLTPEDLGEAGLVEERK--VAGDAMIFVEQCKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAESVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIA 521
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.207e-36 Identity = 87/210 (41.43%), Postives = 129/210 (61.43%), Query Frame = -1 Query: 200 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 829 ++E +A ATG +IV ++LTPE LG+A LV ++ + M+++E C N +AVTI IRGG + +++E +R++ DA+ V ++++ + IV GGA EI +I +D A G EQ AI AFA+AL IP LAEN+GL PIETL V +E P G+D + DM E+ V + +Q I A++ MIL+IDDVI+ S+ Sbjct: 320 DMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRK--VAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH-KEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.577e-36 Identity = 86/210 (40.95%), Postives = 129/210 (61.43%), Query Frame = -1 Query: 200 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 829 ++E +A ATG +IV ++LTPE LG+A LV ++ + M+++E C N +AVTI IRGG + +++E +R++ DA+ V ++++ + I+ GGA EI +I +D A G EQ AI AFA+AL IP LAEN+GL P+ETL V +E P G+D + DM E+ V L +Q I A++ MIL+IDDVI+ S+ Sbjct: 320 DMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRK--VAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIELAIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAH-KEKGPTIGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.059e-36 Identity = 86/210 (40.95%), Postives = 126/210 (60.00%), Query Frame = -1 Query: 200 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 829 +++ +A ATG RIV +L+ E LG+A +V EK D+M+++E C + +AVTI IRGG + +++E +R+I DA+ V + + +V GGGA E+ + + AD G EQ A+ AFADAL+ IP LAENSGL PI+ L ++ + + GID D DM E+ V E L K Q + AT+ +MIL+IDDVI+ E Sbjct: 322 DMQKLARATGARIVTNIDDLSEEDLGEAEVVEEKK--VAGDKMIFVEGCKDPKAVTILIRGGTEHVVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEVEVARQLRDFADGVEGREQLAVEAFADALEIIPRTLAENSGLDPIDVLVQLRAKH-EDGQVTAGIDVYDGDVKDMLEEGVVEPLRVKTQALASATEAAEMILRIDDVIAARE 528 The following BLAST results are available for this feature:
BLAST of CX047541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047541 ID=CX047541; Name=CX047541; organism=Citrus sinensis; type=EST; length=835bpback to top |