CX047541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 9.564e-34 Identity = 78/208 (37.50%), Postives = 124/208 (59.62%), Query Frame = -1 Query: 209 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 829 ++E I G + V + T + LG A L E S + ++ I C + + VTI +RG NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y +RAFADA++ IP LAEN+GL PI T++ ++N+ + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 332 DIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVSLNGS-GKLFKITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRH-AQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 1.249e-33 Identity = 77/207 (37.20%), Postives = 126/207 (60.87%), Query Frame = -1 Query: 209 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 829 +LE +A ATGGR++ ELT + LG A LV E+ G +D+M+++E N ++V+I IRGG + +++ET+R++ DAL ++IR+ V GGGA EI + + A + G EQ AI A+A+A++ + M LAEN+GL PI+ L +++ E N G++ DM + V E + K + AT+ V ++L+IDD+++ Sbjct: 326 DLEKLARATGGRVISNIDELTSQDLGYAALVEERKVG--EDKMVFVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRIDDIVA 530
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THSB_METTH (Thermosome subunit beta OS=Methanobacterium thermoautotrophicum GN=thsB PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.131e-33 Identity = 82/209 (39.23%), Postives = 123/209 (58.85%), Query Frame = -1 Query: 203 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 829 ++E ++ ATG IV ++L+PE LG+AG+V EK + + M+++E C +AVTI +RG + ++ E +R+I DA+ V + + +V GGGA EI + + AD G EQ A+ AFA+AL+ +P LAEN+GL I+ L V + E + GID D DM+E V E K+Q I A + +MIL+IDDVI+ S Sbjct: 313 DMEKLSKATGANIVTNIEDLSPEDLGEAGVVSEKKI--SGEEMIFVEECKEPKAVTILVRGSTEHVVSEVERAIEDAIGVVAATVEDGKVVAGGGAPEIEIAKRLKDYADSISGREQLAVSAFAEALEIVPKTLAENAGLDSIDVL--VDLRAAHEESTYMGIDVFDGKIVDMKEAGVIEPHRVKKQAIQSAAEAAEMILRIDDVIAAS 517
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.634e-33 Identity = 81/207 (39.13%), Postives = 122/207 (58.94%), Query Frame = -1 Query: 209 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 829 +LE +A ATGGR+V ELTP+ LG A LV E+ G +D+M+++E N +AV+I IRGG + +++ET+R++ DAL ++IR+ V GGGA E+ + + A + G EQ AI A+A AL+ + M L EN G PI+ L +++ E N GI+ DM + V E + K I AT+ +IL+IDD+I+ Sbjct: 327 DLEKLARATGGRVVSNIDELTPQDLGYAALVEERKVG--EDKMVFVEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVELEIAKRLRKYAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAHENEANKWYGINVFTGQVEDMWKLGVIEPAVVKMNAIKAATEAATLILRIDDLIA 531
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.634e-33 Identity = 80/207 (38.65%), Postives = 122/207 (58.94%), Query Frame = -1 Query: 209 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 829 ++E +A ATG +++ ++++ E LG+A LV E+ G ++M+++ C N +AVTI +RGG + ++EE R I DA+ + + +V G GA EI S+ + A G EQ A+ AFA AL+ IP LAEN+GL PI+ L +K + G+D + DM+E+ VFE L K Q I AT+V MIL+IDD+I+ Sbjct: 320 DMEKLAKATGAKVLTDLRDISSEDLGEAALVEERKVG--DEKMVFVTGCKNPKAVTILVRGGTEHVVEEIARGIEDAVRAVACAVEDGKVVVGAGAPEIEVSLKLREWAPSLGGREQLAVEAFATALEIIPRTLAENAGLDPIDVLVELKAAH-EKGQKYAGVDVDTGKVVDMKERGVFEPLRVKTQAIGSATEVAVMILRIDDIIA 523
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.634e-33 Identity = 82/207 (39.61%), Postives = 126/207 (60.87%), Query Frame = -1 Query: 209 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 829 ++E +A ATG +IV ++LTPE LG A +V E+ + M+++E C N +AVTI IRGG + +I+E +R++ DA+ V ++++ + +++ GGA EI +I +D A + G E AI FADAL IP LAEN+GL +E L V ++ + GID + DM E+ + E L K+Q I A++ MIL+IDDVI+ Sbjct: 320 DMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAG--ENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEH-KNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIA 523
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.634e-33 Identity = 82/207 (39.61%), Postives = 126/207 (60.87%), Query Frame = -1 Query: 209 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 829 ++E +A ATG +IV ++LTPE LG A +V E+ + M+++E C N +AVTI IRGG + +I+E +R++ DA+ V ++++ + +++ GGA EI +I +D A + G E AI FADAL IP LAEN+GL +E L V ++ + GID + DM E+ + E L K+Q I A++ MIL+IDDVI+ Sbjct: 320 DMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAG--ENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEH-KNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIA 523
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.199e-33 Identity = 76/206 (36.89%), Postives = 122/206 (59.22%), Query Frame = -1 Query: 215 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 829 ++E I G + V T +KLGKA LV E GT+ +++ + N + VT+ RG NK++++E +RS+HDALCV R+L++ ++ GGGA EI S V A + G+ Y +RA+A+AL+ IP LAEN+GL PI ++ ++N+ + N GI+ ++ ++NV + L+ + LAT+ V M+LKIDD+ Sbjct: 327 DIEFICNTIGCQPVANIDSFTADKLGKADLVEE--VGTSDGKIVKVTGIPNPGKTVTVLCRGSNKLVLDEAERSLHDALCVIRSLVKKKFLIAGGGAPEIEVSQQVTAFSKTLTGITSYCVRAYAEALEIIPYTLAENAGLHPISIVTELRNKH-AQGEINSGINVRKGAITNILQENVVQPLLVSTSALTLATETVVMLLKIDDI 529
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.057e-32 Identity = 81/207 (39.13%), Postives = 121/207 (58.45%), Query Frame = -1 Query: 209 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 829 +LE +A ATGGR+V ELT + LG A LV E+ G +D+M++IE N +AV+I IRGG + +++ET+R++ DAL +++R+ + GGGA E + + A + G EQ AI A+A+AL+++ M L EN G PIE L +++ E N GI+ DM V E + K I AT+ +IL+IDD+IS Sbjct: 327 DLEKLARATGGRVVSNIDELTSQDLGYATLVEERKIG--EDKMVFIEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVVRDGRAIAGGGAVETEIAKRLRKYAPQVGGKEQLAIEAYANALESLVMILIENGGFDPIELLVKLRSAHENETNKWHGINVYTGQIQDMWSLGVIEPAVVKMNAIKAATEASTLILRIDDLIS 531
BLAST of CX047541 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.057e-32 Identity = 79/201 (39.30%), Postives = 118/201 (58.71%), Query Frame = -1 Query: 227 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILK 829 +LE + ATGGRIV ++LTPE LG A LV E+ G +D+M++IE C N R+V+I IRGG + +++E +RSI DAL + +R+ ++ GGGAAEI + + A R G EQ AI AFA AL+ + + L EN+GL PI+ + ++ RE+ ID +MRE+ V E + I T+ +I++ Sbjct: 304 DLEKLERATGGRIVSNIEDLTPEDLGYAALVEERKVG--EDKMVFIEGCKNPRSVSIVIRGGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAAEIELAKHIRRLATRVGGKEQLAIEAFAKALEGLAVTLVENAGLDPIDMVMKLRAAHEREDGKYLSIDLATGDLVNMREKGVIEPVSILANAIKAGTEAATIIMR 502 The following BLAST results are available for this feature:
BLAST of CX047541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047541 ID=CX047541; Name=CX047541; organism=Citrus sinensis; type=EST; length=835bpback to top |