CX047431

Overview
NameCX047431
Unique NameCX047431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.424e-50
Identity = 104/166 (62.65%), Postives = 122/166 (73.49%), Query Frame = 2
Query:   68 MSLIPSFFGNRR---SSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVE-EARKANVKAIEISG 553
            MSLIPSFFGN R   +++FDPFSLDVWDPF++   PS  SSA++           NARVDWKET EAH FKADLPG+              L+ISG+R +E+E+K DTWHR ERSSG FSR+FRLPENVKMDQ+KASMENGVLTVTVPKVE   +KA VK+I+ISG
Sbjct:    1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQFPSSSSSAIA-----------NARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSIDISG 155          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.410e-50
Identity = 99/162 (61.11%), Postives = 120/162 (74.07%), Query Frame = 2
Query:   68 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 553
            MS+IPSFFG+RRS+V +PFSLD+WDPF+D+PL +  SS  SS+F  ET+A  N  +DWKETP+AH FKADLPGL              LQISG+R  E+E+KN+ WHR E SSG F RRFRLPEN  +D++KA MENGVLTVTVPKV E +K  VK+I ISG
Sbjct:    1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLIT--SSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKV-EMKKPEVKSIHISG 159          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.205e-49
Identity = 105/163 (64.42%), Postives = 120/163 (73.62%), Query Frame = 2
Query:   68 MSLIPSFFGNRRS-SVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 553
            MSLIP  FG+RRS SVFDPFS+DV+DPF++     G++ + S     ETSA  N R+DWKETPEAH FKADLPGL              LQISG+R +E+EDKNDTWHR ERSSG F RRFRLPEN KMDQ+KASMENGVLTVTVPK EE    +VK+IEISG
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKEL----GFTVSNSG----ETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK-EEVNNPDVKSIEISG 154          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.574e-49
Identity = 103/163 (63.19%), Postives = 116/163 (71.17%), Query Frame = 2
Query:   68 MSLIPSFFGNRRSS-VFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 553
            MSLIP  FG+RRSS +FDPFS+DV+DPFR+   PS  S         E+SA  N R+DWKETPE H FK DLPGL              LQISG+R +E+EDKND WHR ERSSG F RRFRLPEN KMDQ+KASMENGVLTVTVPK EE +K  VK+IEISG
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPSTNSG--------ESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK-EEVKKPEVKSIEISG 154          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.685e-49
Identity = 101/162 (62.35%), Postives = 120/162 (74.07%), Query Frame = 2
Query:   68 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 553
            MSLIPS FG RR++VFDPFSLDV+DPF  F  PSG ++A +     + +A  NA+VDW+ETPEAH FKADLPGL              LQISG+R  E E+KND WHR ERSSG F+RRFRLPEN KM++IKASMENGVL+VTVPKV E +K  VK+I+ISG
Sbjct:    1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAM----DVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPE-KKPEVKSIDISG 157          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.507e-49
Identity = 104/163 (63.80%), Postives = 117/163 (71.78%), Query Frame = 2
Query:   68 MSLIPSFFGNRRSS-VFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 553
            MSLIP  FG+RRSS +FDPFS+DV+DPFR+   P   S         ETSA  N R+DWKETPEAH FKADLPGL              LQISG+R +E+EDKND W R ERSSG F RRFRLPEN KMDQ+KASMENGVLTVTVPK EE +K +VK+IEISG
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPGTNSG--------ETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK-EEMKKPDVKSIEISG 154          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.981e-49
Identity = 97/162 (59.88%), Postives = 118/162 (72.84%), Query Frame = 2
Query:   68 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 553
            MS+IPSFF ++RS++FDPFSLD WDPF+           +S++   ET+A+VNAR+DWKETPEAH  KADLPG+              LQISG+R  E+E+K+DTWHR ERSSG F RRFRLPEN KMD++KA MENGVLTV VPK EE +K  VKAI+ISG
Sbjct:    1 MSIIPSFFTSKRSNIFDPFSLDTWDPFQGI---------ISTEPARETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGVLTVVVPKEEEEKKPMVKAIDISG 153          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.740e-48
Identity = 97/162 (59.88%), Postives = 121/162 (74.69%), Query Frame = 2
Query:   68 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 553
            MSL+PSFFG RR++VFDPFSLDVWDPF  F  P G ++A +     + +A  NA+VDW+ETPEAH FKAD+PGL              LQISG+R  E E+K+DTWHR ERSSG F RRFRLPEN K++++KASMENGVL+VTVPKV+E+ K  VK+++ISG
Sbjct:    1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTP-GLTNAPAK----DVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQES-KPEVKSVDISG 156          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.969e-48
Identity = 97/145 (66.90%), Postives = 108/145 (74.48%), Query Frame = 2
Query:  116 DPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEIS 550
            DPFSLDVWDPF+DFP  +   SA  S FP E SA V+ R+DWKETPEAH FKADLPGL              LQISG+R +E+EDKND WHR ERSSG F RRFRLPEN KMDQ+KA+MENGVLTVTVPK EE +K  VK+IEIS
Sbjct:    1 DPFSLDVWDPFKDFPFTNSALSA--SSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPK-EEIKKPEVKSIEIS 142          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.064e-48
Identity = 98/162 (60.49%), Postives = 115/162 (70.99%), Query Frame = 2
Query:   68 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 553
            MSLIPS FG RRS+VFDPFS D+WDPF  F  PS  S+  ++    + +A  NARVDWKETPEAH FKADLPGL              LQISG+R  E E+KND WHR ER+SG F RRFRLPEN KM+++KA+MENGVLTV VPK  E +K  VK+I+ISG
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPS--SALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPE-KKPQVKSIDISG 159          
The following BLAST results are available for this feature:
BLAST of CX047431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HS17A_ARATH1.424e-5062.6517.6 kDa class I heat shock protein 1 OS=Arabidops... [more]
HSP12_DAUCA5.410e-5061.1118.0 kDa class I heat shock protein OS=Daucus caro... [more]
HSP12_SOLPE1.205e-4964.4217.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_SOLLC1.574e-4963.1917.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HS17C_ARATH2.685e-4962.3517.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HSP11_SOLPE3.507e-4963.8017.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_HELAN5.981e-4959.8817.6 kDa class I heat shock protein OS=Helianthus ... [more]
HSP17_ARATH1.740e-4859.8817.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP11_MEDSA2.969e-4866.9018.1 kDa class I heat shock protein (Fragment) OS=... [more]
HS181_ARATH5.064e-4860.4918.1 kDa class I heat shock protein OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14B07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14B07-D13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047431 ID=CX047431; Name=CX047431; organism=Citrus sinensis; type=EST; length=822bp
TTTACATATCCTACATTCTGCAACAGCCACTTTTCCATTAGTTCTTAACC
GAAAAGAAAACTAGAAAATGTCGCTAATTCCAAGCTTCTTCGGCAACCGA
CGCAGCAGTGTGTTCGATCCATTCTCGCTCGACGTTTGGGATCCATTCAG
GGACTTCCCTTTGCCGTCTGGCTATTCGTCTGCGGTGTCGTCTCAGTTCC
CTCCAGAAACCTCTGCTGTCGTTAACGCCCGCGTGGACTGGAAGGAAACC
CCGGAAGCCCACGCGTTCAAGGCCGATCTTCCGGGGCTGAGGAAAGAGGA
AGTGAAGGTCGAGGTCGAGGACGACAGGGTGCTTCAGATAAGCGGGCAGA
GGGGGATCGAGAGGGAAGACAAGAACGACACGTGGCATCGCTGGGAGCGC
AGCAGCGGCATGTTCTCCAGGAGGTTCAGGCTGCCCGAGAATGTGAAGAT
GGATCAGATTAAGGCTTCCATGGAGAATGGTGTGCTCACTGTTACAGTCC
CTAAGGTGGAGGAGGCCAGGAAAGCCAATGTCAAGGCTATTGAAATTTCT
GGCTGATAAATTGATATTTAATAAACGAAGATGATTTAAAATTTGTGTTG
AATCCCGAGTGAGTCTGTGGTTCATTACTTTTAGTTGAGTGTTGTCTTAT
GTGACGCCTACCATTTTTGTGTGTCTTGTAATGGGATATGTAATTTTGTA
ACCCTGCGCGTCATTTGATCTTGTTTACAATGTATTCGTGCTCTTTAGAA
TTTAAAAAATAAATAAATAAAAAGAGTTGAAGTTAATAGAGTGAAAGCTA
AAGTTATAAATTCATATCGCAA
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