CX047431

Overview
NameCX047431
Unique NameCX047431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.532e-28
Identity = 76/158 (48.10%), Postives = 92/158 (58.23%), Query Frame = 2
Query:   98 RRSSVFDPFSLDVW---DPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIERE--DKNDT-WHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 553
            R  +V DP S+D W   DPF       G   +++ + P     + N RVDWKETP AH F ADLPG+              L ISG+R  E +   KND  WH  ERSSG F RRFRLP   ++DQ+ ASM+NGVLTVTVPK EE +K  +KAI ISG
Sbjct:    5 RSGNVLDPMSVDFWADADPF-------GAVRSLAERCP----VLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPK-EETKKPQLKAIPISG 150          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.704e-25
Identity = 57/74 (77.03%), Postives = 65/74 (87.84%), Query Frame = 2
Query:  332 LQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 553
            LQISG+R +E+EDKNDTWHR ERSSG F R FRLP+N K+DQ+KASMENGVLTVTVPK EE +K +VKAIEISG
Sbjct:    2 LQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPK-EEIKKPDVKAIEISG 74          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.938e-23
Identity = 61/147 (41.50%), Postives = 81/147 (55.10%), Query Frame = 2
Query:  131 DVW-----DPFRDFP-LPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 553
            D+W     DPFR    +P G     +S       A+  ARVDWKETPE H    D+PGL              L++SG+R  E E K D WHR ERS G F R+FRLP+NV +D +KA +ENGVLT+T+ K+   +    + + I+G
Sbjct:   35 DLWSDRFPDPFRVLEHIPFGVDKDEASM------AMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIKGPRVVSIAG 175          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.142e-22
Identity = 65/162 (40.12%), Postives = 89/162 (54.94%), Query Frame = 2
Query:   65 KMSLIPSFFGNRRSSVFDPFSLDVWDPFRDFP-LPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 547
            K SL+P F  +  + + D +S    DPFR    +P G    V    P  T +  +ARVDWKETPE H    D+PGL              L++SG+R  E + K D WHR ERS G F R+F+LP+NV +D +KA MENGVLT+T+ K+   +    + + I
Sbjct:   27 KASLLP-FIDSPNTLLSDLWSDRFPDPFRVLEQIPYG----VEKHEPSITLS--HARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLSHDKIKGPRMVSI 181          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.389e-21
Identity = 56/145 (38.62%), Postives = 81/145 (55.86%), Query Frame = 2
Query:  116 DPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEIS 550
            +P S+D+ +PF D    + +++A S+           A +DWKET  AH F AD+PG+              L+ISGQR    E+K + WHR ERSS  F R  RLP N   D + A+++NGVLT+T+PK +  RK + + I I+
Sbjct:   34 EPVSVDIMEPFMDAISLTAFAAAPSAA-AAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTITIPK-DNDRKPHARIIPIT 176          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.891e-21
Identity = 54/141 (38.30%), Postives = 76/141 (53.90%), Query Frame = 2
Query:  131 DVWDPFRDFPLPSGYSSAVSSQFPPETSAVVN-ARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEIS 550
            D+W     FP P      +      +TS  ++ ARVDWKET E H    D+PGL              L++SG+R  E E K D WHR ERS G F R+F+LP+NV M+ +KA +ENGVLT+ + K+   +    + + I+
Sbjct:   40 DLW--LDRFPDPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVKGPRVVNIA 178          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.781e-19
Identity = 53/144 (36.81%), Postives = 79/144 (54.86%), Query Frame = 2
Query:  110 VFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLP-GLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKA 538
            +FD  + D W+PF  F    G + A  +    +TSA  N  ++ +ET EA+ F+ADLP G+              L I+G+R + RE+K    H  ERS   F  RF LP++  +D ++ASM+ G+LTVTVPKV   ++  + A
Sbjct:    6 LFDTLAFDAWNPFSIF----GTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVTVPKVVTDKQPAIAA 145          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.589e-17
Identity = 57/154 (37.01%), Postives = 82/154 (53.25%), Query Frame = 2
Query:  116 DPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXX-LQISGQR---GIEREDKNDT----WHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 553
            DPF +    P R    P+G  +A ++   P  +AV  AR DWKETPEAH    D+PG+               L++SG+R   G   E++ +     WHR ER++G F RRFR+P    + ++ A +++GVLTVTVPKV   R    + + I G
Sbjct:   41 DPFRVLEQSPLR----PAGGVAAAAAAGEP--AAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVTVPKVPGHRGREPRVVAIDG 188          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 56/153 (36.60%), Postives = 79/153 (51.63%), Query Frame = 2
Query:   71 SLIPSFFGN--RRSSVFDPFSLDVWDPFRDFP-LPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRG----IEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKV 508
            +L+P F G   R  +V +   L   DPFR    +P G+          + + +  ARVDW+ET +AH    D+PG+              L+ISG+R      E++   D WHR ERS G F R+ RLP+N  +D I AS++NGVLTV   K+
Sbjct:   28 ALLPWFGGGGARDEAVPELGLLAAADPFRILEHVPFGFDR-------DDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTVRFRKL 173          
BLAST of CX047431 vs. ExPASy Swiss-Prot
Match: SP21_STIAU (Spore protein SP21 OS=Stigmatella aurantiaca GN=hspA PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.804e-14
Identity = 50/150 (33.33%), Postives = 79/150 (52.67%), Query Frame = 2
Query:   98 RRSSVFDPFS----LDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVK 535
            +R+  +DPF     L  WDPF      + +    + Q PP        R    ET EA+ FKADLPG+              + +SG+R  E+ ++++ ++ +ER+ G FSR F LPE V  D ++A ++NGVLT+T+PK  E +   ++
Sbjct:   15 QRTREWDPFQQMQELMNWDPFE----LANHPWFANRQGPPAFVPAFEVR----ETKEAYIFKADLPGVDEKDIEVTLTGDR-VSVSGKREREKREESERFYAYERTFGSFSRAFTLPEGVDGDNVRADLKNGVLTLTLPKRPEVQPKRIQ 155          
The following BLAST results are available for this feature:
BLAST of CX047431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HS166_ORYSJ1.532e-2848.1016.6 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP12_SOYBN2.704e-2577.03Class I heat shock protein (Fragment) OS=Glycine m... [more]
HSP41_SOYBN1.938e-2341.5022.0 kDa class IV heat shock protein OS=Glycine ma... [more]
HSP41_PEA2.142e-2240.1222.7 kDa class IV heat shock protein OS=Pisum sati... [more]
HS189_ORYSJ1.389e-2138.6218.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP22_ARATH6.891e-2138.3022.0 kDa heat shock protein OS=Arabidopsis thalian... [more]
HS17B_ORYSJ3.781e-1936.8117.9 kDa heat shock protein 2 OS=Oryza sativa subs... [more]
HS219_ORYSJ1.589e-1737.0121.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS232_ORYSJ1.942e-1536.6023.2 kDa heat shock protein OS=Oryza sativa subsp.... [more]
SP21_STIAU2.804e-1433.33Spore protein SP21 OS=Stigmatella aurantiaca GN=hs... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14B07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14B07-D13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047431 ID=CX047431; Name=CX047431; organism=Citrus sinensis; type=EST; length=822bp
TTTACATATCCTACATTCTGCAACAGCCACTTTTCCATTAGTTCTTAACC
GAAAAGAAAACTAGAAAATGTCGCTAATTCCAAGCTTCTTCGGCAACCGA
CGCAGCAGTGTGTTCGATCCATTCTCGCTCGACGTTTGGGATCCATTCAG
GGACTTCCCTTTGCCGTCTGGCTATTCGTCTGCGGTGTCGTCTCAGTTCC
CTCCAGAAACCTCTGCTGTCGTTAACGCCCGCGTGGACTGGAAGGAAACC
CCGGAAGCCCACGCGTTCAAGGCCGATCTTCCGGGGCTGAGGAAAGAGGA
AGTGAAGGTCGAGGTCGAGGACGACAGGGTGCTTCAGATAAGCGGGCAGA
GGGGGATCGAGAGGGAAGACAAGAACGACACGTGGCATCGCTGGGAGCGC
AGCAGCGGCATGTTCTCCAGGAGGTTCAGGCTGCCCGAGAATGTGAAGAT
GGATCAGATTAAGGCTTCCATGGAGAATGGTGTGCTCACTGTTACAGTCC
CTAAGGTGGAGGAGGCCAGGAAAGCCAATGTCAAGGCTATTGAAATTTCT
GGCTGATAAATTGATATTTAATAAACGAAGATGATTTAAAATTTGTGTTG
AATCCCGAGTGAGTCTGTGGTTCATTACTTTTAGTTGAGTGTTGTCTTAT
GTGACGCCTACCATTTTTGTGTGTCTTGTAATGGGATATGTAATTTTGTA
ACCCTGCGCGTCATTTGATCTTGTTTACAATGTATTCGTGCTCTTTAGAA
TTTAAAAAATAAATAAATAAAAAGAGTTGAAGTTAATAGAGTGAAAGCTA
AAGTTATAAATTCATATCGCAA
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