CX047419

Overview
NameCX047419
Unique NameCX047419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DJB11_MOUSE (DnaJ homolog subfamily B member 11 OS=Mus musculus GN=Dnajb11 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.447e-19
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = -3
Query:  450 KVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 866
            K++ E++ LEV +E G+++G +  F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL EAL GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ K
Sbjct:  200 KLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAK 336          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: XDJ1_SCHPO (DnaJ protein homolog xdj1 OS=Schizosaccharomyces pombe GN=xdj1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.114e-19
Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = -3
Query:  402 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF-QFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTD 875
            KG   + E+++L   V +  +   KI   G ADEA     GD++  L QK HP F+R GDDL  +  +SL EAL GF + ++T LDGR L      G+++ P     I  EGM    +  +RG LY+   ++FP+   +   + ++L  +LP    V + D
Sbjct:  211 KGSGTVPEQRMLSFFVNRSAKENDKIIQRGMADEAYGITPGDVILQLHQKPHPVFERLGDDLKAKLKISLAEALTGFNRVILTTLDGRGLEYVQPIGKILHPGDCLIIPGEGMYKDSKTDLRGDLYLEVDIEFPKDGLIGTTEIEILRDILPSIPKVSVMD 371          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DJB11_BOVIN (DnaJ homolog subfamily B member 11 OS=Bos taurus GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.070e-18
Identity = 52/146 (35.62%), Postives = 85/146 (58.22%), Query Frame = -3
Query:  432 KVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFP-ESLSPDQCKMLETVL 866
            K++ E++ LEV +E G+++G +  F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL E+L GF   ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP E LS +  + ++ +L
Sbjct:  200 KLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHSIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLSEEAREGIKQLL 343          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.611e-18
Identity = 55/147 (37.41%), Postives = 79/147 (53.74%), Query Frame = -3
Query:  441 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIV-FVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQL-LIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 875
            KG     EK  +++ ++ G + G KIT+  + D  P T     + FV+Q+K HP FKR GDDL     LS  E+L GF   I  +DGR L L + QP   V+P Q      +GMP  + P  RG L + + VD+P SL+  Q + ++
Sbjct:  206 KGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP---VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 349          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEBR (DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=dnj-20 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.483e-16
Identity = 56/166 (33.73%), Postives = 81/166 (48.80%), Query Frame = -3
Query:  450 KVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKF---------------------------KRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 866
            K++QE KVLEV VE G   G    F GE +   +   GD+ F ++ ++HP+F                           +RKGDDL+   T+SL +AL GF+  I HLDG   ++K Q  +V  P       DEGMP  +    +G L + F V+FP++   D+ K
Sbjct:  199 KLVQENKVLEVEVEVGADEGHTQIFHGEGEPHIEGDPGDLKFKIRIQKHPRFLISVTGIEIIELKVDELVELLLEGIRFERKGDDLYTNVTISLQDALNGFEMEILHLDGH--MVKVQRDKVTWPGARLRKKDEGMPSMENNNKKGMLIVTFDVEFPKTELTDEQK 362          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: SPJ1_SCHPO (DnaJ-related protein spj1 OS=Schizosaccharomyces pombe GN=spj1 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.063e-14
Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = -3
Query:  387 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHP-KFKRKGDDLFVEHTLSLTEALCG-FQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMY-----QRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDE 875
            KGE+V +  +  ++ V  G   G +I F G+ADE P    GDI+ +L+       + RK +DL+ + T+S+ EAL G ++  I  LDG  + +K   GEVV P + + + ++GMP+Y     +     G  YI + V FP+ L     K L  +       +  D E DE
Sbjct:  217 KGERVAEVVESFDIKVPAGAPEGYRIGFRGKADEIPGMEAGDIIVILEAAGGDYGWTRKDNDLYRKETISVREALLGNWKRKIQKLDGSFMEVKRSAGEVVHPGETERVKNQGMPIYNLHKGKTTSAHGSAYIEWEVKFPKKLKGKFLKDLNNLF------EKYDNEFDE 380          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ_BARQU (Chaperone protein dnaJ OS=Bartonella quintana GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.040e-14
Identity = 46/146 (31.51%), Postives = 80/146 (54.79%), Query Frame = -3
Query:  441 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 875
            +G + +++ + L V +  G+++G +I   GE D        GD+   L  K H  F+R+G DL     LS+  A  G +F ++ LDG +  +K   G      QF+ +  +GMPM +R  +RG LYIH +++ P+ L+ +Q ++L+
Sbjct:  205 QGTRRVEKNRSLSVNIPAGIEDGTRIRLSGEGDAGIRGGPNGDLYIFLSVKPHEFFQREGADLHCRIPLSMVTAALGGEFEVSDLDGIKARVKIPEG-TQNGRQFR-LKGKGMPMLRRQQVRGDLYIHITIETPQKLTQEQRELLQ 348          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: APJ1_YEAST (J domain-containing protein APJ1 OS=Saccharomyces cerevisiae GN=APJ1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.175e-13
Identity = 47/161 (29.19%), Postives = 80/161 (49.69%), Query Frame = -3
Query:  432 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDT--------VTGDIVFVLQQKEHPKFK--RKGDDLFVEHTLSLTEALCG-FQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMR--GKLYIHFSVDFPESLSPDQCKMLETVL 875
            +G   I+E+K+L+V V+ G  + Q I   GE DE   T        + GD+V  + + + P F+     + +  +  +    +LCG   ++  H  G+ + +   PGE++KP  FK + D GMP +        G LY+ F V +PE L P+  K ++ +L
Sbjct:  266 QGLGFIKERKILQVTVQPGSCHNQLIVLTGEGDEVISTKGGGHEKVIPGDVVITILRLKDPNFQVINYSNLICKKCKIDFMTSLCGGVVYIEGHPSGKLIKLDIIPGEILKPGCFKTVEDMGMPKFINGVRSGFGHLYVKFDVTYPERLEPENAKKIQNIL 426          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ_BARHE (Chaperone protein dnaJ OS=Bartonella henselae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.618e-13
Identity = 44/146 (30.14%), Postives = 80/146 (54.79%), Query Frame = -3
Query:  441 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 875
            +G + +++ + L V +  G+++  +I   GE D       +GD+   L  K H  F+R+G DL     +S+  A  G +F ++ LDG +  +K   G      QF+ +  +GMPM +R  +RG LYIH +++ P+ L+ +Q ++L+
Sbjct:  205 QGTRRVEKNRSLSVNIPAGIEDSTRIRLSGEGDAGIRGGPSGDLYIFLSVKPHEFFQREGADLHCRVPISMVTAALGGEFEVSDLDGIKARVKIPEG-TQNGRQFR-LKGKGMPMLRRQQVRGDLYIHITIETPQKLTQEQRELLQ 348          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBP (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13
Identity = 39/146 (26.71%), Postives = 82/146 (56.16%), Query Frame = -3
Query:  441 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 875
            KGE + ++++ + + +  G+++G ++   GE +  P+   +GD+  V   K+HP F+R+G+DL V+ ++SL+ A  G +  +  +DG+ + +K   G   +  Q   +   G+P Y   + +G  ++   V+ P+ LS  Q +++E
Sbjct:  212 KGEGLTEKRRTIHIKIPAGVESGSRLKVSGEGESGPNGGPSGDLYVVTHIKKHPVFERQGNDLIVQKSISLSMACLGGEIEVPSIDGKTIQLKIPEG--TESGQIFRLKGHGIP-YLGSYGKGDQHVIIKVEIPKKLSKKQKELME 354          
The following BLAST results are available for this feature:
BLAST of CX047419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
DJB11_MOUSE5.447e-1935.97DnaJ homolog subfamily B member 11 OS=Mus musculus... [more]
XDJ1_SCHPO7.114e-1934.16DnaJ protein homolog xdj1 OS=Schizosaccharomyces p... [more]
DJB11_BOVIN2.070e-1835.62DnaJ homolog subfamily B member 11 OS=Bos taurus G... [more]
SIS1_YEAST4.611e-1837.41Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DNJ20_CAEBR1.483e-1633.73DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=... [more]
SPJ1_SCHPO1.063e-1432.35DnaJ-related protein spj1 OS=Schizosaccharomyces p... [more]
DNAJ_BARQU4.040e-1431.51Chaperone protein dnaJ OS=Bartonella quintana GN=d... [more]
APJ1_YEAST1.175e-1329.19J domain-containing protein APJ1 OS=Saccharomyces ... [more]
DNAJ_BARHE2.618e-1330.14Chaperone protein dnaJ OS=Bartonella henselae GN=d... [more]
DNAJ_LEPBP4.466e-1326.71Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A11-B21-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047419 ID=CX047419; Name=CX047419; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTTTTTTTTTAACACCACCCTGAAATATTGTAAACACTAAAAA
TATTAATTATGAGCATTGAGTCTGAAGGTGCAAACGCTAGAATTCCATTA
CATAGTCAGTTATCAGAAAAACATAAGAATAAAGACAGACAAACCAAAAC
TAGAACCTCTAAAGCCTATAACAGAAAATAAATATGTTGAGAATCTTTTT
CTCCCAAACAATGAAAATACTAAATCAGGCCACCCCTTTTCTTCTACATC
ATCACTGCTGAGCACACTGCACTCTCTGGGCACCACCTTGCATATCGTCA
TCTTCATCGTATGCCTCCTGAGCTGCTTGTTGCTTCCTTCGCATTTCCTC
CTCAATGTTCACATCATGCAGGGTTGTTTCTTCACACTCATCCAGTTCCA
TATCGGTGAGCTGGACTGAGGTCCTTGGAGGTAGTACGGTCTCCAGCATC
TTGCACTGGTCTGGGCTCAGTGACTCAGGGAAGTCAACACTGAAATGAAT
GTACAGTTTGCCCCTCATAAATGGCCTCTGATACATAGGCATTCCTTCAT
CATTTATGGCCTTGAATTGGTCCGGCTTGACTACTTCCCCAGGCTGGGAT
TTGATGAGGAGTTGCCGGCCATCCAAATGAGTTATTACAAATTGAAAGCC
ACAGAGAGCTTCTGTCAGTGACAGGGTGTGCTCAACAAATAGGTCATCAC
CCTTTCGCTTAAATTTCGGGTGCTCTTTCTGTTGTAGAACAAATACAATG
TCACCTGTGACAGTGTCGGGCGCTTCATCAGCTTCTCCAGGGAACGTAAT
CTTCTGTCCATTTTGCATCCCCTTCTCAACAATAACCTCCAAGACTTTTT
TCTCCTGAATGACCTTCTCACCCTTAC
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