CX047413

Overview
NameCX047413
Unique NameCX047413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047413 vs. ExPASy Swiss-Prot
Match: PDIA1_RAT (Protein disulfide-isomerase OS=Rattus norvegicus GN=P4hb PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.644e-26
Identity = 59/147 (40.14%), Postives = 98/147 (66.67%), Query Frame = -1
Query:  421 LDADQIAPWVKEYKEGKVPPFRKSEPIPEE-NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 852
            L A++I  +   + EGK+ P   S+ +PE+ + +PVKVLV  + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAEKITQFCHHFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CX047413 vs. ExPASy Swiss-Prot
Match: PDIA1_MACFU (Protein disulfide-isomerase OS=Macaca fuscata fuscata GN=P4HB PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.644e-26
Identity = 59/147 (40.14%), Postives = 97/147 (65.99%), Query Frame = -1
Query:  421 LDADQIAPWVKEYKEGKVPPFRKSEPIPEE-NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 852
            L A++I  +   + EGK+ P   S+ +PE+ + +PVKVLV  + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF ++  +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAIKVHSFPTLKFFPASVDRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CX047413 vs. ExPASy Swiss-Prot
Match: PDIA1_MOUSE (Protein disulfide-isomerase OS=Mus musculus GN=P4hb PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.148e-26
Identity = 58/147 (39.46%), Postives = 98/147 (66.67%), Query Frame = -1
Query:  421 LDADQIAPWVKEYKEGKVPPFRKSEPIPEE-NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 852
            L A++I  +   + EGK+ P   S+ +PE+ + +PVKVLV  + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  +++IAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAEKITEFCHRFLEGKIKPHLMSQEVPEDWDKQPVKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 480          

HSP 2 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 42/124 (33.87%), Postives = 71/124 (57.26%), Query Frame = -1
Query:  421 SEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQND-ADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSA-SGKTVPYEGDRTKEDIVDFIENNRDKAA 783
            ++ + EE+N  V VL   + ++ +  + K +L+EFYAPWCGHCK LAP   + A   + + +++ +AK DAT        + V+GYPT+ FF++  +     Y   R  +DIV++++     AA
Sbjct:   19 ADALEEEDN--VLVLKKSNFEEALA-AHKYLLVEFYAPWCGHCKALAPEYAKRAAKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGPAA 139          
BLAST of CX047413 vs. ExPASy Swiss-Prot
Match: GSBP_CHICK (Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Gallus gallus PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.148e-26
Identity = 62/168 (36.90%), Postives = 105/168 (62.50%), Query Frame = -1
Query:  382 LDADQIAPWVKEYKEGKVPPFRKS-EPIPEE-NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK--TVPYEGDRTKEDIVDFIEN-------NRDKAAPKETVKEESGKDE 852
            L A+++  +   + EGK+ P   S EP+PE+ + +PVKVLV  + +++ F+  KNV +EFYAPWCGHCK+LAP+ D +  +Y++D ++VIAK ++TAN++  +  +V  +PT+ F  AS +   + Y G+RT +    F+E+       N D    +E ++ +  +DE
Sbjct:  334 LTAEKLTQFCHHFLEGKIKPHLMSNEPLPEDWDKQPVKVLVGKNYEEVAFDEKKNVFIEFYAPWCGHCKQLAPMWDRLGEAYKDDENIVIAKMESTANEV--EAIKVHSFPTLKFFPASAERTVIDYNGERTLDGYKKFLESGGQDGYGNNDDDDLEEALESDMEEDE 499          
BLAST of CX047413 vs. ExPASy Swiss-Prot
Match: PDIA1_CRIGR (Protein disulfide-isomerase OS=Cricetulus griseus GN=P4HB PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.805e-26
Identity = 58/147 (39.46%), Postives = 97/147 (65.99%), Query Frame = -1
Query:  421 LDADQIAPWVKEYKEGKVPPFRKSEPIPEE-NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 852
            L A++I  +   + EGK+ P   S+ +PE+ + +PVKVLV  + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  +++IAK D+TAN++  +  +V  +PT+ FF + + +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAEKITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEV--EAVKVHSFPTLKFFPATADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CX047413 vs. ExPASy Swiss-Prot
Match: PDIA1_BOVIN (Protein disulfide-isomerase OS=Bos taurus GN=P4HB PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.663e-26
Identity = 58/147 (39.46%), Postives = 98/147 (66.67%), Query Frame = -1
Query:  421 LDADQIAPWVKEYKEGKVPPFRKSEPIPEE-NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 852
            L A++I  +   + EGK+ P   S+ +P++ + +PVKVLV  + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAEKITEFCHRFLEGKIKPHLMSQELPDDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 480          

HSP 2 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 44/127 (34.65%), Postives = 68/127 (53.54%), Query Frame = -1
Query:  421 FRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQND-ADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSA-SGKTVPYEGDRTKEDIVDFIENNRDKAA 792
            FR     P+E +  V VL   +  D    + K +L+EFYAPWCGHCK LAP   + A   + + +++ +AK DAT        + V+GYPT+ FF++  +     Y   R  +DIV++++     AA
Sbjct:   15 FRAGAGAPDEEDH-VLVLHKGNF-DEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGPAA 139          
BLAST of CX047413 vs. ExPASy Swiss-Prot
Match: ERP60_SCHMA (Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.101e-25
Identity = 57/151 (37.75%), Postives = 95/151 (62.91%), Query Frame = -1
Query:  445 IQTNDGQKYLKPNLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFI 891
            IQ+ D +KY       D  + ++ ++++G + P  KSEP+P +++  VK LVA +  ++V N  K+V++ F+A WCGHCK L P  +E A   +N+ ++V+A  DATAND+P   ++V+G+PT++F     K+ P  YEG R   DI+ ++
Sbjct:  314 IQSKD-KKYKLEKFSLDAFSDFLNKFEDGLLTPHVKSEPLPTDDSSAVKKLVALNFDEIVNNEEKDVMVVFHAGWCGHCKNLMPKYEEAASKVKNEPNLVLAAMDATANDVP-SPYQVRGFPTIYFVPKGKKSSPVSYEGGRDTNDIIKYL 462          
BLAST of CX047413 vs. ExPASy Swiss-Prot
Match: PDI1_CAEEL (Protein disulfide-isomerase 1 OS=Caenorhabditis elegans GN=pdi-1 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.849e-24
Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = -1
Query:  397 DGQKYLKPNLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNE-PVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEE 879
            D  +  KP  + +    +   Y EGK     K++ +PE+ N  PVKVLVA +  ++  +  K V ++FYAPWCGHCK+L P+ DE+A  Y+++ +VVIAK DAT N++     +V  +PT+  + + S   V Y+GDR  E   +F+      A+  ET  ++
Sbjct:  322 DQVEKFKPQ-EGEDFEAFTNSYLEGKSAQDLKAQDLPEDWNALPVKVLVASNFNEIALDETKTVFVKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATLNELA--DVKVNSFPTLKLWPAGSSTPVDYDGDRNLEKFEEFVNKYAGSASESETASQD 481          

HSP 2 Score: 86.6557 bits (213), Expect = 2.015e-16
Identity = 49/122 (40.16%), Postives = 70/122 (57.38%), Query Frame = -1
Query:  400 NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVA-VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKE 762
            ++E V VL   + ++ + N  + VL++FYAPWC HCK LAP  DE A +  +  +D+ +AK DAT N      FEV+GYPT+ +   SGK   Y G R    IVD++   + K+ P  T  E
Sbjct:   21 DSENVLVLTESNFEETI-NGNEFVLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQALASKFEVRGYPTILY-FKSGKPTKYTGGRATAQIVDWV---KKKSGPTVTTVE 137          
BLAST of CX047413 vs. ExPASy Swiss-Prot
Match: BS2_TRYBB (Bloodstream-specific protein 2 OS=Trypanosoma brucei brucei GN=BS2 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.639e-24
Identity = 56/172 (32.56%), Postives = 92/172 (53.49%), Query Frame = -1
Query:  382 GQKYLKPNLDA---DQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENN----RDKAAPKETVKEESGKDE 876
            G  YL    +    + +  ++ E+  G+V P  KS P+PE      K  +          SGK++L+ F+APWCGHCK  AP  D++A  + +  D+++A+ DATAN +   TF V  +PTVFF    GK V +EG+R+ E++ +F+  +    +    P    +E+  ++E
Sbjct:  305 GANYLHSTAEVVTRESLEKFILEFAAGRVEPTIKSLPVPEVETVDGKTTIVAKTMQKHLTSGKDMLILFFAPWCGHCKNFAPTFDKIAKEF-DATDLIVAELDATANYVNSSTFTVTAFPTVFFVPNGGKPVVFEGERSFENVYEFVRKHVTTFKVSEKPANVTEEKKSEEE 475          
BLAST of CX047413 vs. ExPASy Swiss-Prot
Match: PDIA4_CAEEL (Probable protein disulfide-isomerase A4 OS=Caenorhabditis elegans GN=C14B9.2 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.467e-23
Identity = 67/176 (38.07%), Postives = 97/176 (55.11%), Query Frame = -1
Query:  379 DGQKY-LKPN-----LDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSY-QNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFIENNRDKAAPKETVKEESGKDEL 879
            DG+KY + P+     LD + +  ++K+   GK     KS P P+++  PVK +V  +   +V +  K+VL+EFYAPWCGHCK       E+A +  +   +VV+AK DAT ND P   F V+G+PT++F  A  K+ P  Y G+R  ED+  F+         K  VK    KDEL
Sbjct:  453 DGKKYPMNPDEFDGELD-ENLEAFMKQISSGKAKAHVKSAPAPKDDKGPVKTVVGSNFDKIVNDESKDVLIEFYAPWCGHCKSFESKYVELAQALKKTQPNVVLAKMDATINDAPSQ-FAVEGFPTIYFAPAGKKSEPIKYSGNRDLEDLKKFM--------TKHGVKSFQKKDEL 618          

HSP 2 Score: 79.337 bits (194), Expect = 3.217e-14
Identity = 43/116 (37.07%), Postives = 63/116 (54.31%), Query Frame = -1
Query:  406 VLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRD---KAAPKETV 744
            V++ D   D       +VL++FYAPWCGHCK LAP  ++ +    +   + +AK DAT     G  FE+QGYPT+ F         Y+G R +  IV+++E+  D   K  P+E V
Sbjct:   39 VVLTDKNFDAFLKKNPSVLVKFYAPWCGHCKHLAPEYEKAS----SKVSIPLAKVDATVETELGKRFEIQGYPTLKFWKDGKGPNDYDGGRDEAGIVEWVESRVDPNYKPPPEEVV 150          

HSP 3 Score: 77.411 bits (189), Expect = 1.222e-13
Identity = 50/138 (36.23%), Postives = 72/138 (52.17%), Query Frame = -1
Query:  415 VKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQ-NDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPK 825
            + E+ E +V P  K  P PEE    V  L  ++  D + N+ + VL+EFYAPWCGHCKKLAP  ++ A   +   + V + K DAT     G  + V GYPT+     +G+   Y G R    I+ ++ +    AA K
Sbjct:  130 IVEWVESRVDPNYK--PPPEE----VVTLTTENFDDFISNN-ELVLVEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIEKDLGTKYGVSGYPTMKI-IRNGRRFDYNGPREAAGIIKYMTDQSKPAAKK 259          
The following BLAST results are available for this feature:
BLAST of CX047413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PDIA1_RAT1.644e-2640.14Protein disulfide-isomerase OS=Rattus norvegicus G... [more]
PDIA1_MACFU1.644e-2640.14Protein disulfide-isomerase OS=Macaca fuscata fusc... [more]
PDIA1_MOUSE2.148e-2639.46Protein disulfide-isomerase OS=Mus musculus GN=P4h... [more]
GSBP_CHICK2.148e-2636.90Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
PDIA1_CRIGR2.805e-2639.46Protein disulfide-isomerase OS=Cricetulus griseus ... [more]
PDIA1_BOVIN3.663e-2639.46Protein disulfide-isomerase OS=Bos taurus GN=P4HB ... [more]
ERP60_SCHMA3.101e-2537.75Probable protein disulfide-isomerase ER-60 OS=Schi... [more]
PDI1_CAEEL5.849e-2436.20Protein disulfide-isomerase 1 OS=Caenorhabditis el... [more]
BS2_TRYBB7.639e-2432.56Bloodstream-specific protein 2 OS=Trypanosoma bruc... [more]
PDIA4_CAEEL6.467e-2338.07Probable protein disulfide-isomerase A4 OS=Caenorh... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A08-B15-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047413 ID=CX047413; Name=CX047413; organism=Citrus sinensis; type=EST; length=894bp
AAACACCAGCTTCTTGTACGTAATAAGAAAAATCCGAAATAATTAAGGCA
TTAAATTAAAATTATCCATTTCGGATTTAACACGCAGTAAGTTACTCCTA
GGCGCCGAAAATACTAAAATATCACAACTATGCGAATACCAAAAAGTACT
GCAGCTACAAATGCCGAAAATGCCTCCCCATTTTATTCACGGGAACAGAA
CAGATCTGTAAAGGGAAATGGCCTAAGAAAAAGCTATAAGGGGGGATATA
GGACAAGGGGGAGGAGAACATCAGGCATTGTTTTGTCGACACTGATAGTT
TTGGTATAACATCCGCCAAACACGCGCCAACCGACTATGTGCACGGCTCT
CTAATAAACTCGCACCCATTCCTTCTTAGAGCTCATCTTTTCCAGATTCC
TCTTTTACAGTTTCCTTGGGGGCAGCTTTGTCCCTGTTATTTTCAATGAA
GTCAACAATATCTTCTTTGGTCCTATCCCCCTCATAGGGCACTGTCTTTC
CACTAGCAGATCGGAAGAACACGGTTGGGTAACCTTGGACTTCAAAAGTG
TCACCAGGAATATCATTTGCGGTTGCATCAAATTTTGCAATAACAACATC
AGCATCGTTTTGATATGAGACAGCAACTTCATCCAAGATTGGAGCCAACT
TTTTGCAGTGTCCACACCAAGGAGCGTAAAACTCGAGCAAAACATTTTTT
CCAGAGTTGAAAACCATGTCCTGAAGGCTGTCAGCAACAAGCACTTTCAC
AGGCTCGTTGTTCTCTTCAGGGATAGGCTCAGACTTTCTGAATGGGGGAA
CCTTGCCTTCCTTGTATTCCTTCACCCAAGGTGCAATCTGATCGGCATCC
AAGTTCGGCTTCAAATACTTCTGCCCATCATTAGTCTGAATCCT
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