CX047405

Overview
NameCX047405
Unique NameCX047405
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.438e-33
Identity = 78/212 (36.79%), Postives = 115/212 (54.25%), Query Frame = -3
Query:  229 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGM-NTMVSAVV 858
            K QG CG+CWAF+T  ++E    I    L++LSEQQ++DCD           D GC+GGL+  A++ +I  GG++ ES YPY      C+ +S K  V+V + +  I V E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGYG +        N P+W  KN+WG  WG+ G++R+ +    CGM N + S  V
Sbjct:  128 KNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII--KYCFNSGLNHAVLLVGYGVE-------NNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAV 321          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.438e-33
Identity = 81/211 (38.39%), Postives = 116/211 (54.98%), Query Frame = -3
Query:  238 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNTMVS 858
            K QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC     + E    + GC GG MTNA++Y+    G++ E +YPY+G+   C ++    A +   +  IP  +E  +   +   GP+++ ++A     Q Y  GV     C    +NH VL VGYG      ++ GN+  WIIKNSWG+ WG+ GY  + R +   CG+  + S
Sbjct:  131 KNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-----VSE----NYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYG------IQKGNK-HWIIKNSWGESWGNKGYILMARNKNNACGIANLAS 325          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.409e-33
Identity = 81/214 (37.85%), Postives = 119/214 (55.61%), Query Frame = -3
Query:  238 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGL-----NAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCR-GRGMCGMNTMVS 858
            K QG+CGSCWAFS  GA+EG   + TG L+SLS Q LVDC       E+   + GC GG MT A++Y+I    ++ E+SYPY     KC +D +  A   + +  +P  DE  +   +   GP+++G+     ++ F+  Y  GV     C +  +NHGVL+VGYG        L  + +W++KNSWG  +GD GY R+ R  +  CG+ +  S
Sbjct:  129 KYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCS-----TEEKYGNKGCGGGFMTEAFQYIIDT-SIDSEASYPYKAMDEKCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFL--YQSGVYDDPSCTEN-MNHGVLVVGYGT-------LDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCS 326          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.098e-32
Identity = 77/212 (36.32%), Postives = 115/212 (54.25%), Query Frame = -3
Query:  229 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGM-NTMVSAVV 858
            K QG CG+CWAF+T  ++E    I    L++LSEQQ++DCD           D GC+GGL+  A++ +I  GG++ ES YPY      C+ ++ K  V+V + +  I V E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGYG +        N P+W  KN+WG  WG+ G++R+ +    CGM N + S  V
Sbjct:  128 KNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII--KYCFNSGLNHAVLLVGYGVE-------NNIPYWTFKNTWGTDWGEEGFFRVQQNINACGMRNELASTAV 321          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.173e-32
Identity = 79/218 (36.24%), Postives = 118/218 (54.13%), Query Frame = -3
Query:  214 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVS--CPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCG-MNTMVSAVVTQASS 858
            KMQ  CGSCWAFS    +E    I     L LSEQQLVDCD           +NGC+GGLM+ A++ +I AGG+  E+ YPY G  G C+  +  + +      ++   E ++   L   GP+++ ++ + +  Y  GV+  C +  G   LNHGVLLVGYG +        +  +W +KNSWG  WG+ G++R+ R    CG +N   ++ +  +SS
Sbjct:  149 KMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD---------KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVCKNTTRYVQLSGCYAYDLR-SEKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAKHCSVDHG---LNHGVLLVGYGQE-------NDVKYWTLKNSWGSDWGEQGFFRIKRDVNSCGILNQFAASAILSSSS 346          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32
Identity = 56/89 (62.92%), Postives = 77/89 (86.52%), Query Frame = -3
Query:  232 GPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAV 498
            GPLA+ +NA +MQTYIGGVSCP IC ++ LNHGVLLVGYG+ G++ +RL  +P+W+IKNSWG+ WG++GYY++CRGR +CG+++MVS V
Sbjct:    1 GPLAVAINAAYMQTYIGGVSCPYICSRR-LNHGVLLVGYGSAGYAPIRLKEKPYWVIKNSWGENWGENGYYKICRGRNICGVDSMVSTV 88          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.214e-31
Identity = 75/210 (35.71%), Postives = 114/210 (54.29%), Query Frame = -3
Query:  235 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTN-IPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGM-NTMVSA 858
            K QG CG+CWAF+T G++E    I    L++LSEQQ +DCD           + GC GGL+  A++  +  GG++ ES YPY    G+C+ +  +  V V +    I + E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGY  +        N P+WI+KN+WG  WG+ GY+R+ +    CG+ N +VS+
Sbjct:  129 KNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFESAMEMGGVQMESDYPYETANGQCRINPNRFVVGVRSCRRYIVMFEEKLKDLLRAVGPIPVAIDASDIVNYRRGIMRQ--CANHGLNHAVLLVGYAVE-------NNIPYWILKNTWGTDWGEDGYFRVQQNINACGIRNELVSS 320          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.586e-31
Identity = 78/210 (37.14%), Postives = 113/210 (53.81%), Query Frame = -3
Query:  253 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQ--FDSEKIAVRVANFTNIPVDENQIAAHLVHHGPL--AIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRG----RGMCGM 858
            K QG C SCWAFST GAVEG N I TG L++LSEQ L++C+           +NGC GG +  AY++++  GGL  ++ YPY    G C+     +   V +  + N+P ++       V H P+   +  ++   Q Y  GV     CG   LNHGV++VGYG +         + +WI+KNS G  WG+ GY ++ R     RG+CG+
Sbjct:  160 KDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGV-FDGTCGTN-LNHGVVVVGYGTE-------NGRDYWIVKNSRGDTWGEAGYMKMARNIANPRGLCGI 351          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.071e-31
Identity = 76/207 (36.71%), Postives = 109/207 (52.66%), Query Frame = -3
Query:  238 QGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQF-DSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRG-MCGMNTMVS 852
            QG CGSCWA ST  A+E  + I +G+ + LS QQLVDC  S         ++GC+GG   N ++Y +   GLE ++ YPY GK  KC+  D  +  V +  +  +   E  +   +   GP++  +    M++Y GG+     C    L+HGV +VGYG +         Q +WIIKN+WG  WG+ GY RL R     CG+  M S
Sbjct:  128 QGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYG-------NHGCNGGFAVNGFEY-VKDNGLESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISAVVFGKPMKSYGGGIFDDSSCLGDNLHHGVNVVGYGIE-------NGQKYWIIKNTWGADWGESGYIRLIRDTDHSCGVEKMAS 319          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.705e-31
Identity = 77/213 (36.15%), Postives = 113/213 (53.05%), Query Frame = -3
Query:  238 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYY----RLCRGRGMCGMNTMVS 858
            K Q  CGSCWAFS   AVE  N I TG L+SLSEQ+LVDCD         T  +GC+GG M NA++Y+I  GG++ + +YPY   +G C+    ++ V +  F  +  +        V   P+++ + A     Q Y  G+     CG    NHGV++VGYG +         + +WI++NSWG+ WG+ GY      +    G+CG+  + S
Sbjct:   17 KNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCD---------TASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQGSCKPYRLRV-VSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTG-PCGTA-QNHGVVIVGYGTQ-------SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPS 210          
The following BLAST results are available for this feature:
BLAST of CX047405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
CATV_NPVAC6.438e-3336.79Viral cathepsin OS=Autographa californica nuclear ... [more]
CATK_RABIT6.438e-3338.39Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATS_RAT8.409e-3337.85Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATV_NPVRO1.098e-3236.32Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_GVXN4.173e-3236.24Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
PAPA5_CARPA7.118e-3262.92Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
CATV_NPVOP1.214e-3135.71Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CPR4_ARATH1.586e-3137.14Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CATLL_PHACE2.071e-3136.71Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
ERVB_TABDI2.705e-3136.15Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047405 ID=CX047405; Name=CX047405; organism=Citrus sinensis; type=EST; length=860bp
TTTTTTTTTTTTTTTTTAGAAGAGCAGGTCTGAAAAGCATTTTCAACTCT
AATCCAGAACTTACTTGAGAAAAGGGAATTATGAAACCGGAAAAGCTTCA
ATAATTAGAAGATCACGAACAAGAACAAAAGGGAAACTAGCTACCATTTA
ACATGAGCTGTCTATATTGCTTTCTGTAGATATTCCAACTTAATAAGAGG
GACTTCAAGTTTAGGAGGAGGCTTGAGTGACCACTGCAGAAACCATGGTG
TTCATTCCACACATGCCACGCCCTCGGCAGAGCCGGTAGTACCCATGGTC
TCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAAAACGGCTGGTTTC
CAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGACAAGCAGAACG
CCGTGGTTGAGCCATTTCTTGCCGCAGATTAGGGGGCATGAGACTCCCCC
AATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCCAGAGGACCGT
GGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGGAATATTGGTA
AAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATTGGCATTTGCC
ACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGCCCTCCAGCCG
CGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGAACAACCATTG
TCACAAGTACCCTTCTCCTTTATATCACACGAGTGATCACAATCTACAAG
CTGCTGCTCGCTAAGACTCAGAAGATTCCCAGTCGCAATGAAGTTGGCTC
CTTCAACAGCTCCTGTAGTGCTAAAAGCCCAGCATGACCCACATGCTCCC
TGCATCTTGA
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