CX047405

Overview
NameCX047405
Unique NameCX047405
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.134e-37
Identity = 81/203 (39.90%), Postives = 114/203 (56.16%), Query Frame = -3
Query:  253 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGM 858
            K QG CGSCWAF+  G +E    I   +L+ LSEQQL+DCD           D GC GGLM  A++ +I  GG+E E  YPY G    C+    K+AVR+++     + DE ++   L  +GP+A+ ++ + +  Y  G++   +C    LNH VLLVGYG +        + P+WI KNSWG  WG++GY+R  R    CGM
Sbjct:  142 KEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDR---------VDQGCDGGLMHLAFQEIIRIGGVEHEIDYPYQGIEYACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIIDYRSGIA--TVCNDNGLNHAVLLVGYGIE-------NDTPYWIFKNSWGSNWGENGYFRARRNINACGM 326          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.481e-37
Identity = 90/226 (39.82%), Postives = 117/226 (51.77%), Query Frame = -3
Query:  196 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAA--GGLEEESSYPYIGKRG---KCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVVTQASS*T*SPS 858
            K QG CGSCWAFS  G VE   F+A   L +LSEQ LV CD +         D+GCSGGLM NA+++++    G +  E SYPY    G    C      +   +     +P DE QIAA L  +GP+A+ ++A    TY GGV     C  + L+HGVLLVGY             P+WIIKNSW  QWG+ GY R+ +G   C +    S+ V      T  P+
Sbjct:  139 KDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS--CVSEQLDHGVLLVGYNDS-------AAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVVGGPGPTPEPT 346          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.481e-37
Identity = 86/203 (42.36%), Postives = 113/203 (55.67%), Query Frame = -3
Query:  253 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGM 858
            K QG CG+CWAF+  GA+E    I    L+ L+EQQLVDCD           D GC GGL+  AY+ ++  GG+E+E  YPY   R  C     K AV V N +  + + E ++   L H GP+AI ++A+ +  Y GGV     C    LNH VLLVGYG +        N P+W IKNSWG  +G++GY R+ RG   CGM
Sbjct:  142 KDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAVRLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDLTDYYGGVIS--FCENNGLNHAVLLVGYGIE-------NNVPYWTIKNSWGSDYGENGYVRIRRGVNSCGM 326          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.526e-37
Identity = 82/222 (36.94%), Postives = 120/222 (54.05%), Query Frame = -3
Query:  238 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFS------------ILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNTMVS 858
            K QG CG CW+FSTTG+ EGA+F + G L+SLSEQ L+DC          T ++GC GGLMT A++Y+I   G++ ESSYPY  + GKC++ SE     ++++  +           V+  P+++ ++A     Q Y  G+     C  + L+HGVL VGYG+   S            +    +  +WI+KNSWG  WG  GY  + R R   CG+ +  S
Sbjct:  128 KNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCS---------TENSGCDGGLMTYAFEYIINNNGIDTESSYPYKAENGKCEYKSENSGATLSSYKTVTAGSESSLESAVNVNPVSVAIDASHQSFQLYTSGIYYEPECSSENLDHGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMSRNRDNNCGIASSAS 340          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.299e-37
Identity = 87/212 (41.04%), Postives = 124/212 (58.49%), Query Frame = -3
Query:  238 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGK-CQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNTMVS 858
            K QG CGSCWAFSTTGA+EG +F   G L+SLSEQ LVDC      + +G  + GC+GGLM  A++Y+   GG++ E SYPY  K  + C++ +E  A     F +IP   E  +   +   GP+++ ++A     Q Y  G+     C  + L+HGVL+VGYG +       G + +WI+KNSWG++WGD GY  + + R   CG+ T  S
Sbjct:   17 KDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCS-----RPEG--NQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFE-------GGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAAS 214          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.299e-37
Identity = 92/219 (42.01%), Postives = 122/219 (55.71%), Query Frame = -3
Query:  220 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV---DENQIAAHLVHHGPLAIGLNAI-FMQTYIGGVSCPLICG--KKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVVTQA 858
            K Q  CGSCW FSTTGA+E A   ATG  +SLSEQQLVDC         G  + GC+GGL + A++Y+   GG++ E SYPY G  G C + +E  AV+V +  NI +   DE + A  LV   P+++    I   + Y  GV     CG     +NH VL VGYG +          P+W+IKNSWG  WGD+GY+++  G+ MC + T  S  V  A
Sbjct:  160 KNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDC-------AGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVR--PVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVE-------NGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYPVVAA 362          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.627e-37
Identity = 80/205 (39.02%), Postives = 117/205 (57.07%), Query Frame = -3
Query:  253 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGR-GMCGM 858
            + QG C +CWAF+ TGA+E      TG L  LS Q LVDC      K +G  +NGC GG   NA++Y++  GGLE E++YPY GK G C+++ +     +  F ++P  E+ + A +   GP+  G++A     + Y GG+     C    + HGVL+VGYG KG   +      +W+IKNSWGK+WG  GY +L + +   CG+
Sbjct:  131 RRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCS-----KPQG--NNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPCRYNPKNSKAEITGFVSLPQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDTVTHGVLVVGYGFKG---IETDGNHYWLIKNSWGKRWGIRGYMKLAKDKNNHCGI 325          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 7.349e-37
Identity = 83/206 (40.29%), Postives = 119/206 (57.77%), Query Frame = -3
Query:  253 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGR-GMCGM 858
            K QG CGSCWAFS+TGA+EG +F  +G L+SLSEQ LVDC            +NGC+GGLM NA++Y+   GG++ E SYPY      C F+   +      FT+IP  DE ++A  +   GP+++ ++A     Q Y  GV     C  + L+HGVL+VG+G           + +W++KNSWG  WGD G+ ++ R +   CG+
Sbjct:  170 KDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDE------SGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGI 362          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.599e-37
Identity = 85/209 (40.67%), Postives = 119/209 (56.94%), Query Frame = -3
Query:  253 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC-QFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCR----GRGMCGM 858
            K QG CGSCWAFST GAVEG N I TG+L++LSEQ+LVDCD S         + GC+GGLM  A++++I  GG++ +  YPY G  G C Q       V + ++ ++P    +     V H P++I + A     Q Y  G+     CG + L+HGV+ VGYG +         + +WI++NSWGK WG+ GY R+ R      G CG+
Sbjct:  153 KDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTS--------YNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGI-FDGSCGTQ-LDHGVVAVGYGTE-------NGKDYWIVRNSWGKSWGESGYLRMARNIASSSGKCGI 344          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.599e-37
Identity = 83/203 (40.89%), Postives = 113/203 (55.67%), Query Frame = -3
Query:  253 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGM 858
            K QG CG+CW F++ GA+E    I    L+ LSEQQLVDCD           D GC GGL+  AY+ ++  GG+E+E  Y Y  +R  C     K A  V N +  + ++E ++   L + GP+AI ++A+ +  Y GG+     C    LNH VLLVGYG +        N P+WIIKNSWG  +G+ GY R+ RG   CGM
Sbjct:  142 KDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDCDF---------VDMGCDGGLIHTAYEQIMKMGGVEQEFDYSYKAERQPCALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAIAVDAVDLTDYYGGIVS--FCENNGLNHAVLLVGYGVE-------NNVPYWIIKNSWGSDYGEDGYVRVRRGVNSCGM 326          
The following BLAST results are available for this feature:
BLAST of CX047405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
CATV_NPVST1.134e-3739.90Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CYSP_TRYCR1.481e-3739.82Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATV_NPVMC1.481e-3742.36Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CYSP5_DICDI2.526e-3736.94Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CATL1_CHICK3.299e-3741.04Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
ALEU_HORVU3.299e-3742.01Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATR_MOUSE5.627e-3739.02Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATL_DROME7.349e-3740.29Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
RD21A_ARATH9.599e-3740.67Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CATV_NPVSE9.599e-3740.89Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047405 ID=CX047405; Name=CX047405; organism=Citrus sinensis; type=EST; length=860bp
TTTTTTTTTTTTTTTTTAGAAGAGCAGGTCTGAAAAGCATTTTCAACTCT
AATCCAGAACTTACTTGAGAAAAGGGAATTATGAAACCGGAAAAGCTTCA
ATAATTAGAAGATCACGAACAAGAACAAAAGGGAAACTAGCTACCATTTA
ACATGAGCTGTCTATATTGCTTTCTGTAGATATTCCAACTTAATAAGAGG
GACTTCAAGTTTAGGAGGAGGCTTGAGTGACCACTGCAGAAACCATGGTG
TTCATTCCACACATGCCACGCCCTCGGCAGAGCCGGTAGTACCCATGGTC
TCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAAAACGGCTGGTTTC
CAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGACAAGCAGAACG
CCGTGGTTGAGCCATTTCTTGCCGCAGATTAGGGGGCATGAGACTCCCCC
AATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCCAGAGGACCGT
GGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGGAATATTGGTA
AAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATTGGCATTTGCC
ACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGCCCTCCAGCCG
CGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGAACAACCATTG
TCACAAGTACCCTTCTCCTTTATATCACACGAGTGATCACAATCTACAAG
CTGCTGCTCGCTAAGACTCAGAAGATTCCCAGTCGCAATGAAGTTGGCTC
CTTCAACAGCTCCTGTAGTGCTAAAAGCCCAGCATGACCCACATGCTCCC
TGCATCTTGA
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